RNA–Protein interactions for RNA: ENST00000638270.1

MED17-212, Transcript of mediator complex subunit 17, humanhuman

TSL 2

Gene MED17, Length 2,177 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-212ENST00000638270 NISCHQ9Y2I1 1504 aa18.07■□□□□ 0.48
MED17-212ENST00000638270 CCDC180Q9P1Z9 1646 aa16.1■□□□□ 0.17
MED17-212ENST00000638270 ABCC9O60706 1549 aa15.96■□□□□ 0.15
MED17-212ENST00000638270 RB1CC1Q8TDY2 1594 aa15.23■□□□□ 0.03
MED17-212ENST00000638270 DCAF8L2P0C7V8 631 aa15.19■□□□□ 0.02
MED17-212ENST00000638270 NACADO15069 1562 aa15.18■□□□□ 0.02
MED17-212ENST00000638270 MYO15BQ96JP2 1530 aa15.03■□□□□ -0
MED17-212ENST00000638270 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
MED17-212ENST00000638270 UNC13AQ9UPW8 1703 aa14.97□□□□□ -0.01
MED17-212ENST00000638270 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
MED17-212ENST00000638270 DCAF1Q9Y4B6 1507 aa14.91□□□□□ -0.02
MED17-212ENST00000638270 DNAJC5BQ9UF47 199 aa14.87□□□□□ -0.03
MED17-212ENST00000638270 BICRAQ9NZM4 1560 aa14.84□□□□□ -0.03
MED17-212ENST00000638270 SCRIBQ14160 1630 aa14.72□□□□□ -0.05
MED17-212ENST00000638270 SHROOM4Q9ULL8 1493 aa14.56□□□□□ -0.08
MED17-212ENST00000638270 EIF4G1Q04637 1599 aaKnown RBP14.44□□□□□ -0.1
MED17-212ENST00000638270 CC2D2AQ9P2K1 1620 aa14.43□□□□□ -0.1
MED17-212ENST00000638270 CECR2Q9BXF3 1484 aa14.34□□□□□ -0.11
MED17-212ENST00000638270 SMARCA4P51532 1647 aa14.06□□□□□ -0.16
MED17-212ENST00000638270 NCAPD3P42695 1498 aa14.03□□□□□ -0.16
MED17-212ENST00000638270 ATAD2BQ9ULI0 1458 aa14.03□□□□□ -0.16
MED17-212ENST00000638270 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
MED17-212ENST00000638270 SMARCA2P51531 1590 aa13.96□□□□□ -0.18
MED17-212ENST00000638270 MROH2BQ7Z745 1585 aa13.95□□□□□ -0.18
MED17-212ENST00000638270 HMGXB3Q12766 1538 aa13.92□□□□□ -0.18
MED17-212ENST00000638270 PEG3Q9GZU2 1588 aa13.91□□□□□ -0.18
MED17-212ENST00000638270 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
MED17-212ENST00000638270 WIZO95785 1651 aa13.8□□□□□ -0.2
MED17-212ENST00000638270 NESP48681 1621 aa13.79□□□□□ -0.2
MED17-212ENST00000638270 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
MED17-212ENST00000638270 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
MED17-212ENST00000638270 LAMC3Q9Y6N6 1575 aa13.67□□□□□ -0.22
MED17-212ENST00000638270 CUX2O14529 1486 aa13.63□□□□□ -0.23
MED17-212ENST00000638270 CADPSQ9ULU8 1353 aa13.61□□□□□ -0.23
MED17-212ENST00000638270 KIF21AQ7Z4S6 1674 aa13.61□□□□□ -0.23
MED17-212ENST00000638270 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
MED17-212ENST00000638270 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.24
MED17-212ENST00000638270 PDS5BQ9NTI5 1447 aa13.57□□□□□ -0.24
MED17-212ENST00000638270 CFTRP13569 1480 aa13.5□□□□□ -0.25
MED17-212ENST00000638270 CCDC88BA6NC98 1476 aa13.47□□□□□ -0.25
MED17-212ENST00000638270 HRCP23327 699 aa13.46□□□□□ -0.25
MED17-212ENST00000638270 FANCD2Q9BXW9 1451 aa13.45□□□□□ -0.26
MED17-212ENST00000638270 MRC2Q9UBG0 1479 aa13.45□□□□□ -0.26
MED17-212ENST00000638270 DNAJC5Q9H3Z4 198 aa13.45□□□□□ -0.26
MED17-212ENST00000638270 CEP164Q9UPV0 1460 aa13.43□□□□□ -0.26
MED17-212ENST00000638270 WDR62O43379 1518 aa13.42□□□□□ -0.26
MED17-212ENST00000638270 PRDM2Q13029 1718 aa13.37□□□□□ -0.27
MED17-212ENST00000638270 URB2Q14146 1524 aaKnown RBP13.36□□□□□ -0.27
MED17-212ENST00000638270 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
MED17-212ENST00000638270 SUPT5HO00267 1087 aaKnown RBP13.27□□□□□ -0.29
MED17-212ENST00000638270 TOPBP1Q92547 1522 aa13.23□□□□□ -0.29
MED17-212ENST00000638270 DNMBPQ6XZF7 1577 aa13.18□□□□□ -0.3
MED17-212ENST00000638270 ZNF608Q9ULD9 1512 aaPredicted RBP13.17□□□□□ -0.3
MED17-212ENST00000638270 ABCC8Q09428 1581 aa13.17□□□□□ -0.3
MED17-212ENST00000638270 IFT140Q96RY7 1462 aa13.15□□□□□ -0.3
MED17-212ENST00000638270 POLA1P09884 1462 aaPredicted RBP13.11□□□□□ -0.31
MED17-212ENST00000638270 TARBP1Q13395 1621 aaKnown RBP13.11□□□□□ -0.31
MED17-212ENST00000638270 CUX1P39880 1505 aa13.09□□□□□ -0.31
MED17-212ENST00000638270 RAD54L2Q9Y4B4 1467 aa13.08□□□□□ -0.31
MED17-212ENST00000638270 EIF4G3O43432 1585 aaKnown RBP13.08□□□□□ -0.32
MED17-212ENST00000638270 AQRO60306 1485 aaKnown RBP eCLIP13.07□□□□□ -0.322e-6■■■□□ 18.3
MED17-212ENST00000638270 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
MED17-212ENST00000638270 PPARGC1BQ86YN6 1023 aaKnown RBP13.06□□□□□ -0.32
MED17-212ENST00000638270 PCGF6Q9BYE7 350 aa13.05□□□□□ -0.32
MED17-212ENST00000638270 FGD5Q6ZNL6 1462 aa13.05□□□□□ -0.32
MED17-212ENST00000638270 SOGA1O94964 1423 aa13.04□□□□□ -0.32
MED17-212ENST00000638270 TDRD9Q8NDG6 1382 aaKnown RBP13.02□□□□□ -0.33
MED17-212ENST00000638270 CHD1O14646 1710 aa12.96□□□□□ -0.33
MED17-212ENST00000638270 WDR97A6NE52 1622 aa12.96□□□□□ -0.34
MED17-212ENST00000638270 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
MED17-212ENST00000638270 SYNJ1O43426 1573 aa12.93□□□□□ -0.34
MED17-212ENST00000638270 FBLN2P98095 1184 aa12.93□□□□□ -0.34
MED17-212ENST00000638270 WRNQ14191 1432 aaPredicted RBP eCLIP12.92□□□□□ -0.34
MED17-212ENST00000638270 SNAPC4Q5SXM2 1469 aa12.92□□□□□ -0.34
MED17-212ENST00000638270 BIVM-ERCC5R4GMW8 1640 aa12.92□□□□□ -0.34
MED17-212ENST00000638270 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
MED17-212ENST00000638270 ABCA10Q8WWZ4 1543 aa12.9□□□□□ -0.34
MED17-212ENST00000638270 GRIN2BQ13224 1484 aa12.89□□□□□ -0.35
MED17-212ENST00000638270 GAPVD1Q14C86 1478 aa12.89□□□□□ -0.35
MED17-212ENST00000638270 RIMBP3CA6NJZ7 1639 aa12.89□□□□□ -0.35
MED17-212ENST00000638270 RIMBP3BA6NNM3 1639 aa12.89□□□□□ -0.35
MED17-212ENST00000638270 RIMBP3Q9UFD9 1639 aa12.89□□□□□ -0.35
MED17-212ENST00000638270 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
MED17-212ENST00000638270 PBRM1Q86U86 1689 aa12.88□□□□□ -0.35
MED17-212ENST00000638270 MAGI1Q96QZ7 1491 aaPredicted RBP12.87□□□□□ -0.35
MED17-212ENST00000638270 ARHGEF11O15085 1522 aa12.86□□□□□ -0.35
MED17-212ENST00000638270 MYT1Q01538 1121 aa12.86□□□□□ -0.35
MED17-212ENST00000638270 CHIC1Q5VXU3 224 aa12.85□□□□□ -0.35
MED17-212ENST00000638270 CHMP7Q8WUX9 453 aaPredicted RBP12.85□□□□□ -0.35
MED17-212ENST00000638270 SYNJ2O15056 1496 aa12.83□□□□□ -0.36
MED17-212ENST00000638270 CLASP1Q7Z460 1538 aa12.8□□□□□ -0.36
MED17-212ENST00000638270 CYB5RLQ6IPT4 315 aa12.77□□□□□ -0.37
MED17-212ENST00000638270 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.37
MED17-212ENST00000638270 ADAMTS12P58397 1594 aa12.76□□□□□ -0.37
MED17-212ENST00000638270 ARAP1Q96P48 1450 aa12.75□□□□□ -0.37
MED17-212ENST00000638270 GRIN2AQ12879 1464 aa12.74□□□□□ -0.37
MED17-212ENST00000638270 ERICH3Q5RHP9 1530 aa12.74□□□□□ -0.37
MED17-212ENST00000638270 FHAD1B1AJZ9 1412 aa12.72□□□□□ -0.37
MED17-212ENST00000638270 POTEDQ86YR6 584 aa12.71□□□□□ -0.37
MED17-212ENST00000638270 CEP170Q5SW79 1584 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms