RNA–Protein interactions for RNA: ENST00000638047.1

LINC01876-209, Transcript of long intergenic non-protein coding RNA 1876, humanhuman

TSL 5 BASIC

Gene LINC01876, Length 1,983 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01876-209ENST00000638047 NISCHQ9Y2I1 1504 aa16.82■□□□□ 0.28
LINC01876-209ENST00000638047 AEBP2Q6ZN18 517 aaPredicted RBP15.56■□□□□ 0.08
LINC01876-209ENST00000638047 CCDC180Q9P1Z9 1646 aa15.24■□□□□ 0.03
LINC01876-209ENST00000638047 ABCC9O60706 1549 aa15.19■□□□□ 0.02
LINC01876-209ENST00000638047 CHIC1Q5VXU3 224 aa14.74□□□□□ -0.05
LINC01876-209ENST00000638047 RB1CC1Q8TDY2 1594 aa14.53□□□□□ -0.08
LINC01876-209ENST00000638047 NACADO15069 1562 aa14.42□□□□□ -0.1
LINC01876-209ENST00000638047 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
LINC01876-209ENST00000638047 MYO15BQ96JP2 1530 aa14.24□□□□□ -0.13
LINC01876-209ENST00000638047 UNC13AQ9UPW8 1703 aa14.15□□□□□ -0.14
LINC01876-209ENST00000638047 DCAF8L2P0C7V8 631 aa14.1□□□□□ -0.15
LINC01876-209ENST00000638047 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINC01876-209ENST00000638047 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
LINC01876-209ENST00000638047 SHROOM4Q9ULL8 1493 aa14.01□□□□□ -0.17
LINC01876-209ENST00000638047 DCAF1Q9Y4B6 1507 aa13.98□□□□□ -0.17
LINC01876-209ENST00000638047 ZCCHC6Q5VYS8 1495 aaKnown RBP13.92□□□□□ -0.18
LINC01876-209ENST00000638047 CC2D2AQ9P2K1 1620 aa13.78□□□□□ -0.2
LINC01876-209ENST00000638047 CECR2Q9BXF3 1484 aa13.75□□□□□ -0.21
LINC01876-209ENST00000638047 EIF4G1Q04637 1599 aaKnown RBP13.73□□□□□ -0.21
LINC01876-209ENST00000638047 SCRIBQ14160 1630 aa13.73□□□□□ -0.21
LINC01876-209ENST00000638047 SENP3Q9H4L4 574 aaPredicted RBP13.62□□□□□ -0.23
LINC01876-209ENST00000638047 POTEDQ86YR6 584 aa13.44□□□□□ -0.26
LINC01876-209ENST00000638047 DNAJC5Q9H3Z4 198 aa13.34□□□□□ -0.27
LINC01876-209ENST00000638047 NCAPD3P42695 1498 aa13.29□□□□□ -0.28
LINC01876-209ENST00000638047 CUX2O14529 1486 aa13.28□□□□□ -0.28
LINC01876-209ENST00000638047 PHF23Q9BUL5 403 aaPredicted RBP13.21□□□□□ -0.29
LINC01876-209ENST00000638047 HMGXB3Q12766 1538 aa13.2□□□□□ -0.3
LINC01876-209ENST00000638047 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
LINC01876-209ENST00000638047 ATAD2BQ9ULI0 1458 aa13.19□□□□□ -0.3
LINC01876-209ENST00000638047 ERCC6Q03468 1493 aa13.17□□□□□ -0.3
LINC01876-209ENST00000638047 SMARCA4P51532 1647 aa13.15□□□□□ -0.3
LINC01876-209ENST00000638047 BAZ1AQ9NRL2 1556 aaPredicted RBP13.1□□□□□ -0.31
LINC01876-209ENST00000638047 PEG3Q9GZU2 1588 aa13.08□□□□□ -0.32
LINC01876-209ENST00000638047 BAZ1BQ9UIG0 1483 aaKnown RBP13.05□□□□□ -0.32
LINC01876-209ENST00000638047 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
LINC01876-209ENST00000638047 NESP48681 1621 aa13□□□□□ -0.33
LINC01876-209ENST00000638047 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
LINC01876-209ENST00000638047 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
LINC01876-209ENST00000638047 MROH2BQ7Z745 1585 aa12.9□□□□□ -0.34
LINC01876-209ENST00000638047 KIF21AQ7Z4S6 1674 aa12.88□□□□□ -0.35
LINC01876-209ENST00000638047 CADPSQ9ULU8 1353 aa12.85□□□□□ -0.35
LINC01876-209ENST00000638047 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
LINC01876-209ENST00000638047 WDR62O43379 1518 aa12.8□□□□□ -0.36
LINC01876-209ENST00000638047 WIZO95785 1651 aa12.74□□□□□ -0.37
LINC01876-209ENST00000638047 CEP164Q9UPV0 1460 aa12.73□□□□□ -0.37
LINC01876-209ENST00000638047 CFTRP13569 1480 aa12.68□□□□□ -0.38
LINC01876-209ENST00000638047 FANCD2Q9BXW9 1451 aa12.68□□□□□ -0.38
LINC01876-209ENST00000638047 FOXD1Q16676 465 aa12.66□□□□□ -0.38
LINC01876-209ENST00000638047 TOP2AP11388 1531 aaKnown RBP12.64□□□□□ -0.39
LINC01876-209ENST00000638047 PRDM2Q13029 1718 aa12.61□□□□□ -0.39
LINC01876-209ENST00000638047 RSF1Q96T23 1441 aaPredicted RBP12.6□□□□□ -0.39
LINC01876-209ENST00000638047 TRIM41Q8WV44 630 aa12.6□□□□□ -0.39
LINC01876-209ENST00000638047 OSCARQ8IYS5 282 aa12.59□□□□□ -0.39
LINC01876-209ENST00000638047 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
LINC01876-209ENST00000638047 IFT140Q96RY7 1462 aa12.51□□□□□ -0.41
LINC01876-209ENST00000638047 ABCC8Q09428 1581 aa12.5□□□□□ -0.41
LINC01876-209ENST00000638047 CCDC88BA6NC98 1476 aa12.45□□□□□ -0.42
LINC01876-209ENST00000638047 TOPBP1Q92547 1522 aa12.43□□□□□ -0.42
LINC01876-209ENST00000638047 RIMBP3CA6NJZ7 1639 aa12.43□□□□□ -0.42
LINC01876-209ENST00000638047 RIMBP3BA6NNM3 1639 aa12.43□□□□□ -0.42
LINC01876-209ENST00000638047 RIMBP3Q9UFD9 1639 aa12.43□□□□□ -0.42
LINC01876-209ENST00000638047 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
LINC01876-209ENST00000638047 ZNF608Q9ULD9 1512 aaPredicted RBP12.39□□□□□ -0.43
LINC01876-209ENST00000638047 MSH5O43196 834 aa12.38□□□□□ -0.43
LINC01876-209ENST00000638047 EIF4G3O43432 1585 aaKnown RBP12.38□□□□□ -0.43
LINC01876-209ENST00000638047 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
LINC01876-209ENST00000638047 TARBP1Q13395 1621 aaKnown RBP12.34□□□□□ -0.43
LINC01876-209ENST00000638047 WDR97A6NE52 1622 aa12.33□□□□□ -0.43
LINC01876-209ENST00000638047 CHD1O14646 1710 aa12.31□□□□□ -0.44
LINC01876-209ENST00000638047 POLA1P09884 1462 aaPredicted RBP12.28□□□□□ -0.44
LINC01876-209ENST00000638047 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC01876-209ENST00000638047 SOGA1O94964 1423 aa12.23□□□□□ -0.45
LINC01876-209ENST00000638047 ARAP1Q96P48 1450 aa12.23□□□□□ -0.45
LINC01876-209ENST00000638047 CYB5RLQ6IPT4 315 aa12.22□□□□□ -0.45
LINC01876-209ENST00000638047 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.45
LINC01876-209ENST00000638047 CLASP1Q7Z460 1538 aa12.2□□□□□ -0.46
LINC01876-209ENST00000638047 SYNJ1O43426 1573 aa12.2□□□□□ -0.46
LINC01876-209ENST00000638047 RAD54L2Q9Y4B4 1467 aa12.19□□□□□ -0.46
LINC01876-209ENST00000638047 FBLN2P98095 1184 aa12.18□□□□□ -0.46
LINC01876-209ENST00000638047 FGD5Q6ZNL6 1462 aa12.18□□□□□ -0.46
LINC01876-209ENST00000638047 SNAPC4Q5SXM2 1469 aa12.18□□□□□ -0.46
LINC01876-209ENST00000638047 GRIN2BQ13224 1484 aa12.17□□□□□ -0.46
LINC01876-209ENST00000638047 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
LINC01876-209ENST00000638047 SUPT5HO00267 1087 aaKnown RBP12.15□□□□□ -0.46
LINC01876-209ENST00000638047 SYNJ2O15056 1496 aa12.15□□□□□ -0.46
LINC01876-209ENST00000638047 CUX1P39880 1505 aa12.14□□□□□ -0.47
LINC01876-209ENST00000638047 CHMP7Q8WUX9 453 aaPredicted RBP12.14□□□□□ -0.47
LINC01876-209ENST00000638047 TRHP20396 242 aaPredicted RBP12.13□□□□□ -0.47
LINC01876-209ENST00000638047 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
LINC01876-209ENST00000638047 GAPVD1Q14C86 1478 aa12.09□□□□□ -0.47
LINC01876-209ENST00000638047 ABCA10Q8WWZ4 1543 aa12.08□□□□□ -0.47
LINC01876-209ENST00000638047 ABCA5Q8WWZ7 1642 aa12.07□□□□□ -0.48
LINC01876-209ENST00000638047 GRIN2AQ12879 1464 aa12□□□□□ -0.49
LINC01876-209ENST00000638047 WRNQ14191 1432 aaPredicted RBP eCLIP12□□□□□ -0.49
LINC01876-209ENST00000638047 NUP160Q12769 1436 aa11.99□□□□□ -0.49
LINC01876-209ENST00000638047 ADAMTS12P58397 1594 aa11.98□□□□□ -0.49
LINC01876-209ENST00000638047 BIVM-ERCC5R4GMW8 1640 aa11.98□□□□□ -0.49
LINC01876-209ENST00000638047 TOP2BQ02880 1626 aa11.96□□□□□ -0.49
LINC01876-209ENST00000638047 SHROOM2Q13796 1616 aa11.96□□□□□ -0.5
LINC01876-209ENST00000638047 FHAD1B1AJZ9 1412 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 212.6 ms