RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-256ENST00000637981 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
CACNA1A-256ENST00000637981 ABCC9O60706 1549 aa21.59■■□□□ 1.05
CACNA1A-256ENST00000637981 CCDC180Q9P1Z9 1646 aa21.34■■□□□ 1.01
CACNA1A-256ENST00000637981 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
CACNA1A-256ENST00000637981 DNAJC5BQ9UF47 199 aa20.46■□□□□ 0.87
CACNA1A-256ENST00000637981 RB1CC1Q8TDY2 1594 aa20.45■□□□□ 0.86
CACNA1A-256ENST00000637981 NACADO15069 1562 aa20.24■□□□□ 0.83
CACNA1A-256ENST00000637981 DCAF8L2P0C7V8 631 aa20.13■□□□□ 0.81
CACNA1A-256ENST00000637981 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
CACNA1A-256ENST00000637981 UNC13AQ9UPW8 1703 aa19.97■□□□□ 0.79
CACNA1A-256ENST00000637981 MYO15BQ96JP2 1530 aa19.87■□□□□ 0.77
CACNA1A-256ENST00000637981 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
CACNA1A-256ENST00000637981 ZCCHC6Q5VYS8 1495 aaKnown RBP19.58■□□□□ 0.73
CACNA1A-256ENST00000637981 SHROOM4Q9ULL8 1493 aa19.56■□□□□ 0.72
CACNA1A-256ENST00000637981 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
CACNA1A-256ENST00000637981 CC2D2AQ9P2K1 1620 aa19.49■□□□□ 0.71
CACNA1A-256ENST00000637981 CECR2Q9BXF3 1484 aa19.47■□□□□ 0.71
CACNA1A-256ENST00000637981 SCRIBQ14160 1630 aa19.46■□□□□ 0.71
CACNA1A-256ENST00000637981 EIF4G1Q04637 1599 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-256ENST00000637981 CHIC1Q5VXU3 224 aa19.29■□□□□ 0.68
CACNA1A-256ENST00000637981 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
CACNA1A-256ENST00000637981 CUX2O14529 1486 aa18.7■□□□□ 0.58
CACNA1A-256ENST00000637981 NCAPD3P42695 1498 aa18.69■□□□□ 0.58
CACNA1A-256ENST00000637981 ERCC6Q03468 1493 aa18.67■□□□□ 0.58
CACNA1A-256ENST00000637981 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
CACNA1A-256ENST00000637981 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
CACNA1A-256ENST00000637981 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
CACNA1A-256ENST00000637981 SMARCA4P51532 1647 aa18.53■□□□□ 0.56
CACNA1A-256ENST00000637981 NESP48681 1621 aa18.48■□□□□ 0.55
CACNA1A-256ENST00000637981 BAZ1BQ9UIG0 1483 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-256ENST00000637981 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-256ENST00000637981 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
CACNA1A-256ENST00000637981 THOC2Q8NI27 1593 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-256ENST00000637981 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
CACNA1A-256ENST00000637981 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
CACNA1A-256ENST00000637981 KIF21AQ7Z4S6 1674 aa18.23■□□□□ 0.51
CACNA1A-256ENST00000637981 PDS5BQ9NTI5 1447 aa18.22■□□□□ 0.51
CACNA1A-256ENST00000637981 CADPSQ9ULU8 1353 aa18.12■□□□□ 0.49
CACNA1A-256ENST00000637981 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
CACNA1A-256ENST00000637981 TRIM41Q8WV44 630 aa18.05■□□□□ 0.48
CACNA1A-256ENST00000637981 WDR62O43379 1518 aa18.03■□□□□ 0.48
CACNA1A-256ENST00000637981 WIZO95785 1651 aa18.03■□□□□ 0.48
CACNA1A-256ENST00000637981 CEP164Q9UPV0 1460 aa17.96■□□□□ 0.47
CACNA1A-256ENST00000637981 FANCD2Q9BXW9 1451 aa17.92■□□□□ 0.46
CACNA1A-256ENST00000637981 CFTRP13569 1480 aa17.86■□□□□ 0.45
CACNA1A-256ENST00000637981 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
CACNA1A-256ENST00000637981 RSF1Q96T23 1441 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-256ENST00000637981 TOP2AP11388 1531 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-256ENST00000637981 URB2Q14146 1524 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-256ENST00000637981 SENP3Q9H4L4 574 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-256ENST00000637981 PRDM2Q13029 1718 aa17.65■□□□□ 0.42
CACNA1A-256ENST00000637981 RIMBP3CA6NJZ7 1639 aa17.61■□□□□ 0.41
CACNA1A-256ENST00000637981 RIMBP3BA6NNM3 1639 aa17.61■□□□□ 0.41
CACNA1A-256ENST00000637981 RIMBP3Q9UFD9 1639 aa17.61■□□□□ 0.41
CACNA1A-256ENST00000637981 ZNF608Q9ULD9 1512 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-256ENST00000637981 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
CACNA1A-256ENST00000637981 CCDC88BA6NC98 1476 aa17.58■□□□□ 0.41
CACNA1A-256ENST00000637981 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
CACNA1A-256ENST00000637981 ARHGEF11O15085 1522 aa17.53■□□□□ 0.4
CACNA1A-256ENST00000637981 EIF4G3O43432 1585 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-256ENST00000637981 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
CACNA1A-256ENST00000637981 DNMBPQ6XZF7 1577 aa17.46■□□□□ 0.39
CACNA1A-256ENST00000637981 CYB5RLQ6IPT4 315 aa17.43■□□□□ 0.38
CACNA1A-256ENST00000637981 AQRO60306 1485 aaKnown RBP eCLIP17.42■□□□□ 0.38
CACNA1A-256ENST00000637981 CHD1O14646 1710 aa17.4■□□□□ 0.38
CACNA1A-256ENST00000637981 TARBP1Q13395 1621 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-256ENST00000637981 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-256ENST00000637981 FBLN2P98095 1184 aa17.37■□□□□ 0.37
CACNA1A-256ENST00000637981 POLA1P09884 1462 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-256ENST00000637981 ARAP1Q96P48 1450 aa17.33■□□□□ 0.37
CACNA1A-256ENST00000637981 TRHP20396 242 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-256ENST00000637981 RAD54L2Q9Y4B4 1467 aa17.3■□□□□ 0.36
CACNA1A-256ENST00000637981 SOGA1O94964 1423 aa17.28■□□□□ 0.36
CACNA1A-256ENST00000637981 TDRD9Q8NDG6 1382 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-256ENST00000637981 SNAPC4Q5SXM2 1469 aa17.23■□□□□ 0.35
CACNA1A-256ENST00000637981 FGD5Q6ZNL6 1462 aa17.22■□□□□ 0.35
CACNA1A-256ENST00000637981 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
CACNA1A-256ENST00000637981 CHMP7Q8WUX9 453 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-256ENST00000637981 CLASP1Q7Z460 1538 aa17.19■□□□□ 0.34
CACNA1A-256ENST00000637981 SYNJ1O43426 1573 aa17.18■□□□□ 0.34
CACNA1A-256ENST00000637981 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-256ENST00000637981 CUX1P39880 1505 aa17.17■□□□□ 0.34
CACNA1A-256ENST00000637981 GRIN2BQ13224 1484 aa17.15■□□□□ 0.34
CACNA1A-256ENST00000637981 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
CACNA1A-256ENST00000637981 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
CACNA1A-256ENST00000637981 GAPVD1Q14C86 1478 aa17.06■□□□□ 0.32
CACNA1A-256ENST00000637981 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
CACNA1A-256ENST00000637981 ABCA5Q8WWZ7 1642 aa17■□□□□ 0.31
CACNA1A-256ENST00000637981 GRIN2AQ12879 1464 aa16.93■□□□□ 0.3
CACNA1A-256ENST00000637981 ERCC6L2Q5T890 1561 aa16.92■□□□□ 0.3
CACNA1A-256ENST00000637981 WRNQ14191 1432 aaPredicted RBP eCLIP16.89■□□□□ 0.29
CACNA1A-256ENST00000637981 ADAMTS12P58397 1594 aa16.89■□□□□ 0.29
CACNA1A-256ENST00000637981 CEP170Q5SW79 1584 aa16.88■□□□□ 0.29
CACNA1A-256ENST00000637981 NUP160Q12769 1436 aa16.88■□□□□ 0.29
CACNA1A-256ENST00000637981 SUPT5HO00267 1087 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-256ENST00000637981 FHAD1B1AJZ9 1412 aa16.83■□□□□ 0.29
CACNA1A-256ENST00000637981 SHROOM2Q13796 1616 aa16.83■□□□□ 0.28
CACNA1A-256ENST00000637981 TOP2BQ02880 1626 aa16.82■□□□□ 0.28
CACNA1A-256ENST00000637981 BIVM-ERCC5R4GMW8 1640 aa16.82■□□□□ 0.28
CACNA1A-256ENST00000637981 ERICH3Q5RHP9 1530 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms