RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 NISCHQ9Y2I1 1504 aa27.39■■□□□ 1.98
SRP54-AS1-205ENST00000636540 CCDC180Q9P1Z9 1646 aa24.51■■□□□ 1.51
SRP54-AS1-205ENST00000636540 ABCC9O60706 1549 aa23.87■■□□□ 1.41
SRP54-AS1-205ENST00000636540 AEBP2Q6ZN18 517 aaPredicted RBP23.25■■□□□ 1.31
SRP54-AS1-205ENST00000636540 RB1CC1Q8TDY2 1594 aa23.01■■□□□ 1.27
SRP54-AS1-205ENST00000636540 NACADO15069 1562 aa22.97■■□□□ 1.27
SRP54-AS1-205ENST00000636540 ZCCHC6Q5VYS8 1495 aaKnown RBP22.86■■□□□ 1.25
SRP54-AS1-205ENST00000636540 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.25
SRP54-AS1-205ENST00000636540 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
SRP54-AS1-205ENST00000636540 DCAF8L2P0C7V8 631 aa22.64■■□□□ 1.21
SRP54-AS1-205ENST00000636540 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
SRP54-AS1-205ENST00000636540 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
SRP54-AS1-205ENST00000636540 BICRAQ9NZM4 1560 aa22.35■■□□□ 1.17
SRP54-AS1-205ENST00000636540 SCRIBQ14160 1630 aa22.28■■□□□ 1.16
SRP54-AS1-205ENST00000636540 PABPN1Q86U42 306 aaKnown RBP eCLIP22.18■■□□□ 1.14
SRP54-AS1-205ENST00000636540 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
SRP54-AS1-205ENST00000636540 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
SRP54-AS1-205ENST00000636540 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
SRP54-AS1-205ENST00000636540 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
SRP54-AS1-205ENST00000636540 CECR2Q9BXF3 1484 aa21.46■■□□□ 1.03
SRP54-AS1-205ENST00000636540 SMARCA4P51532 1647 aa21.33■■□□□ 1
SRP54-AS1-205ENST00000636540 BAZ1AQ9NRL2 1556 aaPredicted RBP21.26■□□□□ 0.99
SRP54-AS1-205ENST00000636540 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
SRP54-AS1-205ENST00000636540 ATAD2BQ9ULI0 1458 aa21.15■□□□□ 0.98
SRP54-AS1-205ENST00000636540 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.97
SRP54-AS1-205ENST00000636540 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
SRP54-AS1-205ENST00000636540 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
SRP54-AS1-205ENST00000636540 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
SRP54-AS1-205ENST00000636540 BAZ1BQ9UIG0 1483 aaKnown RBP20.98■□□□□ 0.95
SRP54-AS1-205ENST00000636540 WIZO95785 1651 aa20.92■□□□□ 0.94
SRP54-AS1-205ENST00000636540 RSF1Q96T23 1441 aaPredicted RBP20.8■□□□□ 0.92
SRP54-AS1-205ENST00000636540 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
SRP54-AS1-205ENST00000636540 LAMC3Q9Y6N6 1575 aa20.66■□□□□ 0.9
SRP54-AS1-205ENST00000636540 NESP48681 1621 aa20.66■□□□□ 0.9
SRP54-AS1-205ENST00000636540 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
SRP54-AS1-205ENST00000636540 KIF21AQ7Z4S6 1674 aa20.52■□□□□ 0.88
SRP54-AS1-205ENST00000636540 THOC2Q8NI27 1593 aaKnown RBP20.49■□□□□ 0.87
SRP54-AS1-205ENST00000636540 CADPSQ9ULU8 1353 aa20.47■□□□□ 0.87
SRP54-AS1-205ENST00000636540 CUX2O14529 1486 aa20.43■□□□□ 0.86
SRP54-AS1-205ENST00000636540 PRDM2Q13029 1718 aa20.42■□□□□ 0.86
SRP54-AS1-205ENST00000636540 PDS5BQ9NTI5 1447 aa20.42■□□□□ 0.86
SRP54-AS1-205ENST00000636540 CFTRP13569 1480 aa20.4■□□□□ 0.86
SRP54-AS1-205ENST00000636540 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
SRP54-AS1-205ENST00000636540 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
SRP54-AS1-205ENST00000636540 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
SRP54-AS1-205ENST00000636540 MRC2Q9UBG0 1479 aa20.28■□□□□ 0.84
SRP54-AS1-205ENST00000636540 WDR62O43379 1518 aa20.27■□□□□ 0.83
SRP54-AS1-205ENST00000636540 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
SRP54-AS1-205ENST00000636540 SUPT5HO00267 1087 aaKnown RBP20.07■□□□□ 0.8
SRP54-AS1-205ENST00000636540 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
SRP54-AS1-205ENST00000636540 TOPBP1Q92547 1522 aa19.98■□□□□ 0.79
SRP54-AS1-205ENST00000636540 ABCC8Q09428 1581 aa19.94■□□□□ 0.78
SRP54-AS1-205ENST00000636540 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
SRP54-AS1-205ENST00000636540 IFT140Q96RY7 1462 aa19.86■□□□□ 0.77
SRP54-AS1-205ENST00000636540 CUX1P39880 1505 aa19.83■□□□□ 0.77
SRP54-AS1-205ENST00000636540 TARBP1Q13395 1621 aaKnown RBP19.82■□□□□ 0.76
SRP54-AS1-205ENST00000636540 POLA1P09884 1462 aaPredicted RBP19.81■□□□□ 0.76
SRP54-AS1-205ENST00000636540 EIF4G3O43432 1585 aaKnown RBP19.79■□□□□ 0.76
SRP54-AS1-205ENST00000636540 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
SRP54-AS1-205ENST00000636540 FGD5Q6ZNL6 1462 aa19.75■□□□□ 0.75
SRP54-AS1-205ENST00000636540 WDR97A6NE52 1622 aa19.73■□□□□ 0.75
SRP54-AS1-205ENST00000636540 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
SRP54-AS1-205ENST00000636540 DNAJC5Q9H3Z4 198 aa19.72■□□□□ 0.75
SRP54-AS1-205ENST00000636540 BIVM-ERCC5R4GMW8 1640 aa19.71■□□□□ 0.75
SRP54-AS1-205ENST00000636540 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
SRP54-AS1-205ENST00000636540 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
SRP54-AS1-205ENST00000636540 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
SRP54-AS1-205ENST00000636540 SOGA1O94964 1423 aa19.63■□□□□ 0.73
SRP54-AS1-205ENST00000636540 WRNQ14191 1432 aaPredicted RBP eCLIP19.62■□□□□ 0.73
SRP54-AS1-205ENST00000636540 AQRO60306 1485 aaKnown RBP eCLIP19.59■□□□□ 0.731e-6■■■■□ 25.1
SRP54-AS1-205ENST00000636540 ABCA5Q8WWZ7 1642 aa19.58■□□□□ 0.72
SRP54-AS1-205ENST00000636540 PBRM1Q86U86 1689 aa19.57■□□□□ 0.72
SRP54-AS1-205ENST00000636540 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
SRP54-AS1-205ENST00000636540 CHD1O14646 1710 aa19.56■□□□□ 0.72
SRP54-AS1-205ENST00000636540 TDRD9Q8NDG6 1382 aaKnown RBP19.52■□□□□ 0.72
SRP54-AS1-205ENST00000636540 SNAPC4Q5SXM2 1469 aa19.48■□□□□ 0.71
SRP54-AS1-205ENST00000636540 GRIN2BQ13224 1484 aa19.48■□□□□ 0.71
SRP54-AS1-205ENST00000636540 MAGI1Q96QZ7 1491 aaPredicted RBP19.47■□□□□ 0.71
SRP54-AS1-205ENST00000636540 GAPVD1Q14C86 1478 aa19.46■□□□□ 0.71
SRP54-AS1-205ENST00000636540 OSCARQ8IYS5 282 aa19.39■□□□□ 0.69
SRP54-AS1-205ENST00000636540 ADAMTS12P58397 1594 aa19.39■□□□□ 0.69
SRP54-AS1-205ENST00000636540 SYNJ2O15056 1496 aa19.37■□□□□ 0.69
SRP54-AS1-205ENST00000636540 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
SRP54-AS1-205ENST00000636540 CLASP1Q7Z460 1538 aa19.32■□□□□ 0.68
SRP54-AS1-205ENST00000636540 RIMBP3CA6NJZ7 1639 aa19.3■□□□□ 0.68
SRP54-AS1-205ENST00000636540 RIMBP3BA6NNM3 1639 aa19.3■□□□□ 0.68
SRP54-AS1-205ENST00000636540 RIMBP3Q9UFD9 1639 aa19.3■□□□□ 0.68
SRP54-AS1-205ENST00000636540 ARHGEF11O15085 1522 aa19.27■□□□□ 0.68
SRP54-AS1-205ENST00000636540 GRIN2AQ12879 1464 aa19.26■□□□□ 0.67
SRP54-AS1-205ENST00000636540 FBLN2P98095 1184 aa19.25■□□□□ 0.67
SRP54-AS1-205ENST00000636540 FHAD1B1AJZ9 1412 aa19.23■□□□□ 0.67
SRP54-AS1-205ENST00000636540 CEP170Q5SW79 1584 aa19.21■□□□□ 0.67
SRP54-AS1-205ENST00000636540 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
SRP54-AS1-205ENST00000636540 CUL7Q14999 1698 aa19.2■□□□□ 0.66
SRP54-AS1-205ENST00000636540 KIF27Q86VH2 1401 aa19.19■□□□□ 0.66
SRP54-AS1-205ENST00000636540 NUP160Q12769 1436 aa19.17■□□□□ 0.66
SRP54-AS1-205ENST00000636540 SHROOM2Q13796 1616 aa19.11■□□□□ 0.65
SRP54-AS1-205ENST00000636540 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
SRP54-AS1-205ENST00000636540 ARAP1Q96P48 1450 aa19.11■□□□□ 0.65
SRP54-AS1-205ENST00000636540 IGF1RP08069 1367 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms