RNA–Protein interactions for RNA: ENST00000636138.1

CACNA1D-208, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-208ENST00000636138 AEBP2Q6ZN18 517 aaPredicted RBP22.24■■□□□ 1.15
CACNA1D-208ENST00000636138 NISCHQ9Y2I1 1504 aa22.13■■□□□ 1.13
CACNA1D-208ENST00000636138 CHIC1Q5VXU3 224 aa21.53■■□□□ 1.04
CACNA1D-208ENST00000636138 ABCC9O60706 1549 aa20.83■□□□□ 0.92
CACNA1D-208ENST00000636138 CCDC180Q9P1Z9 1646 aa20.26■□□□□ 0.83
CACNA1D-208ENST00000636138 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
CACNA1D-208ENST00000636138 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
CACNA1D-208ENST00000636138 NACADO15069 1562 aa19.23■□□□□ 0.67
CACNA1D-208ENST00000636138 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
CACNA1D-208ENST00000636138 UNC13AQ9UPW8 1703 aa19.19■□□□□ 0.66
CACNA1D-208ENST00000636138 SENP3Q9H4L4 574 aaPredicted RBP19.03■□□□□ 0.64
CACNA1D-208ENST00000636138 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
CACNA1D-208ENST00000636138 DCAF8L2P0C7V8 631 aa18.92■□□□□ 0.62
CACNA1D-208ENST00000636138 PHF23Q9BUL5 403 aaPredicted RBP18.85■□□□□ 0.61
CACNA1D-208ENST00000636138 DNAJC5Q9H3Z4 198 aa18.82■□□□□ 0.6
CACNA1D-208ENST00000636138 CECR2Q9BXF3 1484 aa18.82■□□□□ 0.6
CACNA1D-208ENST00000636138 CC2D2AQ9P2K1 1620 aa18.8■□□□□ 0.6
CACNA1D-208ENST00000636138 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
CACNA1D-208ENST00000636138 SHROOM4Q9ULL8 1493 aa18.66■□□□□ 0.58
CACNA1D-208ENST00000636138 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
CACNA1D-208ENST00000636138 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
CACNA1D-208ENST00000636138 ZCCHC6Q5VYS8 1495 aaKnown RBP18.24■□□□□ 0.51
CACNA1D-208ENST00000636138 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
CACNA1D-208ENST00000636138 CUX2O14529 1486 aa18.21■□□□□ 0.51
CACNA1D-208ENST00000636138 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
CACNA1D-208ENST00000636138 TRIM41Q8WV44 630 aa17.83■□□□□ 0.44
CACNA1D-208ENST00000636138 THOC2Q8NI27 1593 aaKnown RBP17.71■□□□□ 0.43
CACNA1D-208ENST00000636138 NESP48681 1621 aa17.69■□□□□ 0.42
CACNA1D-208ENST00000636138 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
CACNA1D-208ENST00000636138 FOXD1Q16676 465 aa17.62■□□□□ 0.41
CACNA1D-208ENST00000636138 SMARCA2P51531 1590 aa17.61■□□□□ 0.41
CACNA1D-208ENST00000636138 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
CACNA1D-208ENST00000636138 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
CACNA1D-208ENST00000636138 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
CACNA1D-208ENST00000636138 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
CACNA1D-208ENST00000636138 SMARCA4P51532 1647 aa17.47■□□□□ 0.39
CACNA1D-208ENST00000636138 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
CACNA1D-208ENST00000636138 BAZ1AQ9NRL2 1556 aaPredicted RBP17.41■□□□□ 0.38
CACNA1D-208ENST00000636138 PLPPR3Q6T4P5 718 aa17.4■□□□□ 0.38
CACNA1D-208ENST00000636138 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
CACNA1D-208ENST00000636138 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
CACNA1D-208ENST00000636138 WDR62O43379 1518 aa17.28■□□□□ 0.36
CACNA1D-208ENST00000636138 PEG3Q9GZU2 1588 aa17.25■□□□□ 0.35
CACNA1D-208ENST00000636138 RIMBP3CA6NJZ7 1639 aa17.18■□□□□ 0.34
CACNA1D-208ENST00000636138 RIMBP3BA6NNM3 1639 aa17.18■□□□□ 0.34
CACNA1D-208ENST00000636138 RIMBP3Q9UFD9 1639 aa17.18■□□□□ 0.34
CACNA1D-208ENST00000636138 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
CACNA1D-208ENST00000636138 CADPSQ9ULU8 1353 aa17.12■□□□□ 0.33
CACNA1D-208ENST00000636138 CEP164Q9UPV0 1460 aa17.11■□□□□ 0.33
CACNA1D-208ENST00000636138 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
CACNA1D-208ENST00000636138 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
CACNA1D-208ENST00000636138 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
CACNA1D-208ENST00000636138 TRHP20396 242 aaPredicted RBP16.91■□□□□ 0.3
CACNA1D-208ENST00000636138 URB2Q14146 1524 aaKnown RBP16.9■□□□□ 0.3
CACNA1D-208ENST00000636138 WIZO95785 1651 aa16.88■□□□□ 0.29
CACNA1D-208ENST00000636138 CYB5RLQ6IPT4 315 aa16.84■□□□□ 0.29
CACNA1D-208ENST00000636138 CFTRP13569 1480 aa16.81■□□□□ 0.28
CACNA1D-208ENST00000636138 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
CACNA1D-208ENST00000636138 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
CACNA1D-208ENST00000636138 CHD1O14646 1710 aa16.79■□□□□ 0.28
CACNA1D-208ENST00000636138 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
CACNA1D-208ENST00000636138 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
CACNA1D-208ENST00000636138 EIF4G3O43432 1585 aaKnown RBP16.76■□□□□ 0.27
CACNA1D-208ENST00000636138 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
CACNA1D-208ENST00000636138 ADRA2BP18089 450 aa16.69■□□□□ 0.26
CACNA1D-208ENST00000636138 RSF1Q96T23 1441 aaPredicted RBP16.66■□□□□ 0.26
CACNA1D-208ENST00000636138 TOP2AP11388 1531 aaKnown RBP16.61■□□□□ 0.25
CACNA1D-208ENST00000636138 TOPBP1Q92547 1522 aa16.61■□□□□ 0.25
CACNA1D-208ENST00000636138 PIAS4Q8N2W9 510 aaPredicted RBP16.58■□□□□ 0.24
CACNA1D-208ENST00000636138 FBLN2P98095 1184 aa16.56■□□□□ 0.24
CACNA1D-208ENST00000636138 AQRO60306 1485 aaKnown RBP eCLIP16.53■□□□□ 0.24
CACNA1D-208ENST00000636138 DNMBPQ6XZF7 1577 aa16.52■□□□□ 0.24
CACNA1D-208ENST00000636138 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
CACNA1D-208ENST00000636138 CLASP1Q7Z460 1538 aa16.5■□□□□ 0.23
CACNA1D-208ENST00000636138 ABCC8Q09428 1581 aa16.49■□□□□ 0.23
CACNA1D-208ENST00000636138 SYNJ1O43426 1573 aa16.46■□□□□ 0.23
CACNA1D-208ENST00000636138 MSH5O43196 834 aa16.45■□□□□ 0.22
CACNA1D-208ENST00000636138 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
CACNA1D-208ENST00000636138 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
CACNA1D-208ENST00000636138 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
CACNA1D-208ENST00000636138 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
CACNA1D-208ENST00000636138 RAD54L2Q9Y4B4 1467 aa16.33■□□□□ 0.2
CACNA1D-208ENST00000636138 WDR97A6NE52 1622 aa16.33■□□□□ 0.2
CACNA1D-208ENST00000636138 MAGI1Q96QZ7 1491 aaPredicted RBP16.31■□□□□ 0.2
CACNA1D-208ENST00000636138 TDRD9Q8NDG6 1382 aaKnown RBP16.31■□□□□ 0.2
CACNA1D-208ENST00000636138 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
CACNA1D-208ENST00000636138 SYNJ2O15056 1496 aa16.26■□□□□ 0.19
CACNA1D-208ENST00000636138 SOGA1O94964 1423 aa16.26■□□□□ 0.19
CACNA1D-208ENST00000636138 PBRM1Q86U86 1689 aa16.25■□□□□ 0.19
CACNA1D-208ENST00000636138 KIF13AQ9H1H9 1805 aa16.24■□□□□ 0.19
CACNA1D-208ENST00000636138 ILDR1Q86SU0 546 aaPredicted RBP16.24■□□□□ 0.19
CACNA1D-208ENST00000636138 GRIN2BQ13224 1484 aa16.23■□□□□ 0.19
CACNA1D-208ENST00000636138 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
CACNA1D-208ENST00000636138 ERCC6L2Q5T890 1561 aa16.19■□□□□ 0.18
CACNA1D-208ENST00000636138 CEP170Q5SW79 1584 aa16.1■□□□□ 0.17
CACNA1D-208ENST00000636138 CUX1P39880 1505 aa16.09■□□□□ 0.17
CACNA1D-208ENST00000636138 ABCA5Q8WWZ7 1642 aa16.07■□□□□ 0.16
CACNA1D-208ENST00000636138 KDM6BO15054 1643 aa16.05■□□□□ 0.16
CACNA1D-208ENST00000636138 GRIN2AQ12879 1464 aa16.04■□□□□ 0.16
CACNA1D-208ENST00000636138 SHROOM2Q13796 1616 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms