RNA–Protein interactions for RNA: ENST00000635082.1

ATRIP-205, Transcript of ATR interacting protein, humanhuman

TSL 5

Gene ATRIP, Length 793 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-205ENST00000635082 NISCHQ9Y2I1 1504 aa29.74■■■□□ 2.35
ATRIP-205ENST00000635082 ABCC9O60706 1549 aa28.05■■■□□ 2.08
ATRIP-205ENST00000635082 AEBP2Q6ZN18 517 aaPredicted RBP27.82■■■□□ 2.04
ATRIP-205ENST00000635082 DNAJC5BQ9UF47 199 aa27.21■■□□□ 1.95
ATRIP-205ENST00000635082 CCDC180Q9P1Z9 1646 aa27.12■■□□□ 1.93
ATRIP-205ENST00000635082 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
ATRIP-205ENST00000635082 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
ATRIP-205ENST00000635082 PABPN1Q86U42 306 aaKnown RBP eCLIP25.96■■□□□ 1.75
ATRIP-205ENST00000635082 NACADO15069 1562 aa25.82■■□□□ 1.72
ATRIP-205ENST00000635082 UNC13AQ9UPW8 1703 aa25.8■■□□□ 1.72
ATRIP-205ENST00000635082 DNAJC5Q9H3Z4 198 aa25.61■■□□□ 1.69
ATRIP-205ENST00000635082 BICRAQ9NZM4 1560 aa25.6■■□□□ 1.69
ATRIP-205ENST00000635082 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
ATRIP-205ENST00000635082 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
ATRIP-205ENST00000635082 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
ATRIP-205ENST00000635082 MYO15BQ96JP2 1530 aa25.13■■□□□ 1.61
ATRIP-205ENST00000635082 SHROOM4Q9ULL8 1493 aa25.02■■□□□ 1.6
ATRIP-205ENST00000635082 EIF4G1Q04637 1599 aaKnown RBP25■■□□□ 1.59
ATRIP-205ENST00000635082 SCRIBQ14160 1630 aa24.67■■□□□ 1.54
ATRIP-205ENST00000635082 CUX2O14529 1486 aa24.51■■□□□ 1.51
ATRIP-205ENST00000635082 DCAF1Q9Y4B6 1507 aa24.47■■□□□ 1.51
ATRIP-205ENST00000635082 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
ATRIP-205ENST00000635082 ERCC6Q03468 1493 aa24.22■■□□□ 1.47
ATRIP-205ENST00000635082 TRIM41Q8WV44 630 aa24.09■■□□□ 1.45
ATRIP-205ENST00000635082 NCAPD3P42695 1498 aa23.86■■□□□ 1.41
ATRIP-205ENST00000635082 NESP48681 1621 aa23.85■■□□□ 1.41
ATRIP-205ENST00000635082 THOC2Q8NI27 1593 aaKnown RBP23.79■■□□□ 1.4
ATRIP-205ENST00000635082 ATAD2BQ9ULI0 1458 aa23.66■■□□□ 1.38
ATRIP-205ENST00000635082 SENP3Q9H4L4 574 aaPredicted RBP23.59■■□□□ 1.37
ATRIP-205ENST00000635082 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
ATRIP-205ENST00000635082 SMARCA2P51531 1590 aa23.57■■□□□ 1.36
ATRIP-205ENST00000635082 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
ATRIP-205ENST00000635082 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
ATRIP-205ENST00000635082 SMARCA4P51532 1647 aa23.43■■□□□ 1.34
ATRIP-205ENST00000635082 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
ATRIP-205ENST00000635082 BAZ1AQ9NRL2 1556 aaPredicted RBP23.35■■□□□ 1.33
ATRIP-205ENST00000635082 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.32
ATRIP-205ENST00000635082 PHF23Q9BUL5 403 aaPredicted RBP23.32■■□□□ 1.32
ATRIP-205ENST00000635082 OSCARQ8IYS5 282 aa23.23■■□□□ 1.31
ATRIP-205ENST00000635082 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
ATRIP-205ENST00000635082 WDR62O43379 1518 aa23.22■■□□□ 1.31
ATRIP-205ENST00000635082 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
ATRIP-205ENST00000635082 RIMBP3CA6NJZ7 1639 aa23.12■■□□□ 1.29
ATRIP-205ENST00000635082 RIMBP3BA6NNM3 1639 aa23.12■■□□□ 1.29
ATRIP-205ENST00000635082 RIMBP3Q9UFD9 1639 aa23.12■■□□□ 1.29
ATRIP-205ENST00000635082 CADPSQ9ULU8 1353 aa23.07■■□□□ 1.28
ATRIP-205ENST00000635082 MROH2BQ7Z745 1585 aa22.94■■□□□ 1.26
ATRIP-205ENST00000635082 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
ATRIP-205ENST00000635082 ARHGEF11O15085 1522 aa22.9■■□□□ 1.26
ATRIP-205ENST00000635082 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
ATRIP-205ENST00000635082 TRHP20396 242 aaPredicted RBP22.81■■□□□ 1.24
ATRIP-205ENST00000635082 CYB5RLQ6IPT4 315 aa22.78■■□□□ 1.24
ATRIP-205ENST00000635082 URB2Q14146 1524 aaKnown RBP22.75■■□□□ 1.23
ATRIP-205ENST00000635082 WIZO95785 1651 aa22.65■■□□□ 1.22
ATRIP-205ENST00000635082 ZNF608Q9ULD9 1512 aaPredicted RBP22.63■■□□□ 1.21
ATRIP-205ENST00000635082 CFTRP13569 1480 aa22.63■■□□□ 1.21
ATRIP-205ENST00000635082 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
ATRIP-205ENST00000635082 CHD1O14646 1710 aa22.51■■□□□ 1.19
ATRIP-205ENST00000635082 IFT140Q96RY7 1462 aa22.5■■□□□ 1.19
ATRIP-205ENST00000635082 EIF4G3O43432 1585 aaKnown RBP22.45■■□□□ 1.18
ATRIP-205ENST00000635082 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
ATRIP-205ENST00000635082 PRDM2Q13029 1718 aa22.4■■□□□ 1.18
ATRIP-205ENST00000635082 TOPBP1Q92547 1522 aa22.31■■□□□ 1.16
ATRIP-205ENST00000635082 FBLN2P98095 1184 aa22.28■■□□□ 1.16
ATRIP-205ENST00000635082 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.16
ATRIP-205ENST00000635082 TOP2AP11388 1531 aaKnown RBP22.23■■□□□ 1.15
ATRIP-205ENST00000635082 TARBP1Q13395 1621 aaKnown RBP22.22■■□□□ 1.15
ATRIP-205ENST00000635082 CLASP1Q7Z460 1538 aa22.17■■□□□ 1.14
ATRIP-205ENST00000635082 ABCC8Q09428 1581 aa22.13■■□□□ 1.13
ATRIP-205ENST00000635082 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
ATRIP-205ENST00000635082 FOXD1Q16676 465 aa22.08■■□□□ 1.13
ATRIP-205ENST00000635082 ILDR1Q86SU0 546 aaPredicted RBP22.04■■□□□ 1.12
ATRIP-205ENST00000635082 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
ATRIP-205ENST00000635082 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
ATRIP-205ENST00000635082 SNAPC4Q5SXM2 1469 aa22.02■■□□□ 1.12
ATRIP-205ENST00000635082 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
ATRIP-205ENST00000635082 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
ATRIP-205ENST00000635082 GAPVD1Q14C86 1478 aa21.98■■□□□ 1.11
ATRIP-205ENST00000635082 RAD54L2Q9Y4B4 1467 aa21.98■■□□□ 1.11
ATRIP-205ENST00000635082 CHMP7Q8WUX9 453 aaPredicted RBP21.95■■□□□ 1.1
ATRIP-205ENST00000635082 MAGI1Q96QZ7 1491 aaPredicted RBP21.89■■□□□ 1.09
ATRIP-205ENST00000635082 SOGA1O94964 1423 aa21.88■■□□□ 1.09
ATRIP-205ENST00000635082 KIF13AQ9H1H9 1805 aa21.86■■□□□ 1.09
ATRIP-205ENST00000635082 WDR97A6NE52 1622 aa21.85■■□□□ 1.09
ATRIP-205ENST00000635082 SYNJ2O15056 1496 aa21.83■■□□□ 1.09
ATRIP-205ENST00000635082 ERCC6L2Q5T890 1561 aa21.82■■□□□ 1.08
ATRIP-205ENST00000635082 GRIN2BQ13224 1484 aa21.79■■□□□ 1.08
ATRIP-205ENST00000635082 FGD5Q6ZNL6 1462 aa21.75■■□□□ 1.07
ATRIP-205ENST00000635082 KDM4FA0A1W2PPD8 638 aa21.74■■□□□ 1.07
ATRIP-205ENST00000635082 PBRM1Q86U86 1689 aa21.72■■□□□ 1.07
ATRIP-205ENST00000635082 CEP170Q5SW79 1584 aa21.63■■□□□ 1.05
ATRIP-205ENST00000635082 CUX1P39880 1505 aa21.6■■□□□ 1.05
ATRIP-205ENST00000635082 SHROOM2Q13796 1616 aa21.55■■□□□ 1.04
ATRIP-205ENST00000635082 ABCA5Q8WWZ7 1642 aa21.53■■□□□ 1.04
ATRIP-205ENST00000635082 GRIN2AQ12879 1464 aa21.52■■□□□ 1.04
ATRIP-205ENST00000635082 FAM69CQ0P6D2 419 aa21.52■■□□□ 1.04
ATRIP-205ENST00000635082 KDM6BO15054 1643 aa21.51■■□□□ 1.03
ATRIP-205ENST00000635082 ABCC10Q5T3U5 1492 aa21.51■■□□□ 1.03
ATRIP-205ENST00000635082 NUP160Q12769 1436 aa21.49■■□□□ 1.03
ATRIP-205ENST00000635082 DIP2BQ9P265 1576 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms