RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-223ENST00000631247 AEBP2Q6ZN18 517 aaPredicted RBP27.68■■■□□ 2.02
UBE3A-223ENST00000631247 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
UBE3A-223ENST00000631247 NISCHQ9Y2I1 1504 aa25.81■■□□□ 1.72
UBE3A-223ENST00000631247 SENP3Q9H4L4 574 aaPredicted RBP23.66■■□□□ 1.38
UBE3A-223ENST00000631247 PHF23Q9BUL5 403 aaPredicted RBP23.36■■□□□ 1.33
UBE3A-223ENST00000631247 CCDC180Q9P1Z9 1646 aa23.22■■□□□ 1.31
UBE3A-223ENST00000631247 ABCC9O60706 1549 aa23.12■■□□□ 1.29
UBE3A-223ENST00000631247 RB1CC1Q8TDY2 1594 aa22.06■■□□□ 1.12
UBE3A-223ENST00000631247 FOXD1Q16676 465 aa22.01■■□□□ 1.11
UBE3A-223ENST00000631247 NACADO15069 1562 aa21.89■■□□□ 1.09
UBE3A-223ENST00000631247 DCAF8L2P0C7V8 631 aa21.79■■□□□ 1.08
UBE3A-223ENST00000631247 MYO15BQ96JP2 1530 aa21.57■■□□□ 1.04
UBE3A-223ENST00000631247 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
UBE3A-223ENST00000631247 DNAJC5BQ9UF47 199 aa21.5■■□□□ 1.03
UBE3A-223ENST00000631247 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.03
UBE3A-223ENST00000631247 ZCCHC6Q5VYS8 1495 aaKnown RBP21.41■■□□□ 1.02
UBE3A-223ENST00000631247 BICRAQ9NZM4 1560 aa21.34■■□□□ 1.01
UBE3A-223ENST00000631247 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
UBE3A-223ENST00000631247 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
UBE3A-223ENST00000631247 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
UBE3A-223ENST00000631247 SHROOM4Q9ULL8 1493 aa21.13■□□□□ 0.97
UBE3A-223ENST00000631247 CC2D2AQ9P2K1 1620 aa20.89■□□□□ 0.93
UBE3A-223ENST00000631247 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
UBE3A-223ENST00000631247 CECR2Q9BXF3 1484 aa20.81■□□□□ 0.92
UBE3A-223ENST00000631247 PPP6R1Q9UPN7 881 aa20.63■□□□□ 0.89
UBE3A-223ENST00000631247 MSH5O43196 834 aa20.61■□□□□ 0.89
UBE3A-223ENST00000631247 PIAS4Q8N2W9 510 aaPredicted RBP20.6■□□□□ 0.89
UBE3A-223ENST00000631247 ADRA2BP18089 450 aa20.58■□□□□ 0.89
UBE3A-223ENST00000631247 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
UBE3A-223ENST00000631247 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
UBE3A-223ENST00000631247 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
UBE3A-223ENST00000631247 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
UBE3A-223ENST00000631247 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.8
UBE3A-223ENST00000631247 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
UBE3A-223ENST00000631247 ERCC6Q03468 1493 aa20.01■□□□□ 0.79
UBE3A-223ENST00000631247 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
UBE3A-223ENST00000631247 POTEDQ86YR6 584 aa19.94■□□□□ 0.78
UBE3A-223ENST00000631247 PEG3Q9GZU2 1588 aa19.93■□□□□ 0.78
UBE3A-223ENST00000631247 CUX2O14529 1486 aa19.91■□□□□ 0.78
UBE3A-223ENST00000631247 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
UBE3A-223ENST00000631247 NESP48681 1621 aa19.84■□□□□ 0.77
UBE3A-223ENST00000631247 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.76
UBE3A-223ENST00000631247 DNAJC5Q9H3Z4 198 aa19.76■□□□□ 0.75
UBE3A-223ENST00000631247 THOC2Q8NI27 1593 aaKnown RBP19.68■□□□□ 0.74
UBE3A-223ENST00000631247 WIZO95785 1651 aa19.68■□□□□ 0.74
UBE3A-223ENST00000631247 KIF21AQ7Z4S6 1674 aa19.66■□□□□ 0.74
UBE3A-223ENST00000631247 PDS5BQ9NTI5 1447 aa19.64■□□□□ 0.73
UBE3A-223ENST00000631247 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
UBE3A-223ENST00000631247 MRC2Q9UBG0 1479 aa19.47■□□□□ 0.71
UBE3A-223ENST00000631247 RSF1Q96T23 1441 aaPredicted RBP19.46■□□□□ 0.71
UBE3A-223ENST00000631247 TOP2AP11388 1531 aaKnown RBP19.45■□□□□ 0.7
UBE3A-223ENST00000631247 CEP164Q9UPV0 1460 aa19.42■□□□□ 0.7
UBE3A-223ENST00000631247 WDR62O43379 1518 aa19.41■□□□□ 0.7
UBE3A-223ENST00000631247 FANCD2Q9BXW9 1451 aa19.37■□□□□ 0.69
UBE3A-223ENST00000631247 CFTRP13569 1480 aa19.35■□□□□ 0.69
UBE3A-223ENST00000631247 PRDM2Q13029 1718 aa19.27■□□□□ 0.68
UBE3A-223ENST00000631247 URB2Q14146 1524 aaKnown RBP19.19■□□□□ 0.66
UBE3A-223ENST00000631247 CCDC88BA6NC98 1476 aa19.17■□□□□ 0.66
UBE3A-223ENST00000631247 IFT140Q96RY7 1462 aa19.01■□□□□ 0.63
UBE3A-223ENST00000631247 TOPBP1Q92547 1522 aa19■□□□□ 0.63
UBE3A-223ENST00000631247 TRIM41Q8WV44 630 aa19■□□□□ 0.63
UBE3A-223ENST00000631247 ABCC8Q09428 1581 aa18.99■□□□□ 0.63
UBE3A-223ENST00000631247 DNMBPQ6XZF7 1577 aa18.97■□□□□ 0.63
UBE3A-223ENST00000631247 OSCARQ8IYS5 282 aa18.96■□□□□ 0.63
UBE3A-223ENST00000631247 ZNF608Q9ULD9 1512 aaPredicted RBP18.94■□□□□ 0.62
UBE3A-223ENST00000631247 SCAF1Q9H7N4 1312 aaKnown RBP18.92■□□□□ 0.62
UBE3A-223ENST00000631247 EIF4G3O43432 1585 aaKnown RBP18.91■□□□□ 0.62
UBE3A-223ENST00000631247 MAPK8IP2Q13387 824 aaPredicted RBP18.88■□□□□ 0.61
UBE3A-223ENST00000631247 TARBP1Q13395 1621 aaKnown RBP18.83■□□□□ 0.61
UBE3A-223ENST00000631247 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
UBE3A-223ENST00000631247 RIMBP3CA6NJZ7 1639 aa18.78■□□□□ 0.6
UBE3A-223ENST00000631247 RIMBP3BA6NNM3 1639 aa18.78■□□□□ 0.6
UBE3A-223ENST00000631247 RIMBP3Q9UFD9 1639 aa18.78■□□□□ 0.6
UBE3A-223ENST00000631247 CHD1O14646 1710 aa18.77■□□□□ 0.59
UBE3A-223ENST00000631247 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.59
UBE3A-223ENST00000631247 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
UBE3A-223ENST00000631247 RAD54L2Q9Y4B4 1467 aa18.72■□□□□ 0.59
UBE3A-223ENST00000631247 SOGA1O94964 1423 aa18.72■□□□□ 0.59
UBE3A-223ENST00000631247 FGD5Q6ZNL6 1462 aa18.71■□□□□ 0.59
UBE3A-223ENST00000631247 ARHGEF11O15085 1522 aa18.7■□□□□ 0.58
UBE3A-223ENST00000631247 WDR97A6NE52 1622 aa18.7■□□□□ 0.58
UBE3A-223ENST00000631247 FBLN2P98095 1184 aa18.69■□□□□ 0.58
UBE3A-223ENST00000631247 CUX1P39880 1505 aa18.69■□□□□ 0.58
UBE3A-223ENST00000631247 SUPT5HO00267 1087 aaKnown RBP18.68■□□□□ 0.58
UBE3A-223ENST00000631247 TDRD9Q8NDG6 1382 aaKnown RBP18.66■□□□□ 0.58
UBE3A-223ENST00000631247 SNAPC4Q5SXM2 1469 aa18.63■□□□□ 0.57
UBE3A-223ENST00000631247 MAGI1Q96QZ7 1491 aaPredicted RBP18.58■□□□□ 0.57
UBE3A-223ENST00000631247 GRIN2BQ13224 1484 aa18.58■□□□□ 0.56
UBE3A-223ENST00000631247 PBRM1Q86U86 1689 aa18.57■□□□□ 0.56
UBE3A-223ENST00000631247 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
UBE3A-223ENST00000631247 PPP4R3CPQ6ZMV5 832 aa18.54■□□□□ 0.56
UBE3A-223ENST00000631247 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
UBE3A-223ENST00000631247 CYB5RLQ6IPT4 315 aa18.53■□□□□ 0.56
UBE3A-223ENST00000631247 SYNJ2O15056 1496 aa18.51■□□□□ 0.55
UBE3A-223ENST00000631247 GAPVD1Q14C86 1478 aa18.51■□□□□ 0.55
UBE3A-223ENST00000631247 ARAP1Q96P48 1450 aa18.51■□□□□ 0.55
UBE3A-223ENST00000631247 CLASP1Q7Z460 1538 aa18.5■□□□□ 0.55
UBE3A-223ENST00000631247 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
UBE3A-223ENST00000631247 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
UBE3A-223ENST00000631247 BIVM-ERCC5R4GMW8 1640 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms