RNA–Protein interactions for RNA: ENST00000630477.1

PSMB2-203, Transcript of proteasome subunit beta 2, humanhuman

TSL 1 (best)

Gene PSMB2, Length 1,127 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB2-203ENST00000630477 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.82
PSMB2-203ENST00000630477 ABCC9O60706 1549 aa24.94■■□□□ 1.58
PSMB2-203ENST00000630477 DNAJC5BQ9UF47 199 aa24.26■■□□□ 1.47
PSMB2-203ENST00000630477 CCDC180Q9P1Z9 1646 aa24.01■■□□□ 1.43
PSMB2-203ENST00000630477 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.33
PSMB2-203ENST00000630477 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.29
PSMB2-203ENST00000630477 NACADO15069 1562 aa22.97■■□□□ 1.27
PSMB2-203ENST00000630477 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
PSMB2-203ENST00000630477 DNAJC5Q9H3Z4 198 aa22.97■■□□□ 1.27
PSMB2-203ENST00000630477 BICRAQ9NZM4 1560 aa22.7■■□□□ 1.22
PSMB2-203ENST00000630477 UNC13AQ9UPW8 1703 aa22.62■■□□□ 1.21
PSMB2-203ENST00000630477 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
PSMB2-203ENST00000630477 DCAF8L2P0C7V8 631 aa22.57■■□□□ 1.2
PSMB2-203ENST00000630477 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
PSMB2-203ENST00000630477 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
PSMB2-203ENST00000630477 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
PSMB2-203ENST00000630477 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
PSMB2-203ENST00000630477 EIF4G1Q04637 1599 aaKnown RBP22.22■■□□□ 1.15
PSMB2-203ENST00000630477 CUX2O14529 1486 aa21.93■■□□□ 1.1
PSMB2-203ENST00000630477 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
PSMB2-203ENST00000630477 DCAF1Q9Y4B6 1507 aa21.79■■□□□ 1.08
PSMB2-203ENST00000630477 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
PSMB2-203ENST00000630477 ERCC6Q03468 1493 aa21.59■■□□□ 1.05
PSMB2-203ENST00000630477 TRIM41Q8WV44 630 aa21.48■■□□□ 1.03
PSMB2-203ENST00000630477 NCAPD3P42695 1498 aa21.28■■□□□ 1
PSMB2-203ENST00000630477 NESP48681 1621 aa21.16■□□□□ 0.98
PSMB2-203ENST00000630477 THOC2Q8NI27 1593 aaKnown RBP21.13■□□□□ 0.97
PSMB2-203ENST00000630477 ATAD2BQ9ULI0 1458 aa21.06■□□□□ 0.96
PSMB2-203ENST00000630477 HMGXB3Q12766 1538 aa21■□□□□ 0.95
PSMB2-203ENST00000630477 SMARCA2P51531 1590 aa20.92■□□□□ 0.94
PSMB2-203ENST00000630477 LAMC3Q9Y6N6 1575 aa20.87■□□□□ 0.93
PSMB2-203ENST00000630477 PDS5BQ9NTI5 1447 aa20.82■□□□□ 0.92
PSMB2-203ENST00000630477 BAZ1BQ9UIG0 1483 aaKnown RBP20.76■□□□□ 0.91
PSMB2-203ENST00000630477 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
PSMB2-203ENST00000630477 KIF21AQ7Z4S6 1674 aa20.74■□□□□ 0.91
PSMB2-203ENST00000630477 SMARCA4P51532 1647 aa20.73■□□□□ 0.91
PSMB2-203ENST00000630477 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
PSMB2-203ENST00000630477 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
PSMB2-203ENST00000630477 WDR62O43379 1518 aa20.67■□□□□ 0.9
PSMB2-203ENST00000630477 PEG3Q9GZU2 1588 aa20.61■□□□□ 0.89
PSMB2-203ENST00000630477 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.88
PSMB2-203ENST00000630477 RIMBP3CA6NJZ7 1639 aa20.51■□□□□ 0.87
PSMB2-203ENST00000630477 RIMBP3BA6NNM3 1639 aa20.51■□□□□ 0.87
PSMB2-203ENST00000630477 RIMBP3Q9UFD9 1639 aa20.51■□□□□ 0.87
PSMB2-203ENST00000630477 ARHGEF11O15085 1522 aa20.42■□□□□ 0.86
PSMB2-203ENST00000630477 CEP164Q9UPV0 1460 aa20.41■□□□□ 0.86
PSMB2-203ENST00000630477 TRHP20396 242 aaPredicted RBP20.34■□□□□ 0.85
PSMB2-203ENST00000630477 FANCD2Q9BXW9 1451 aa20.31■□□□□ 0.84
PSMB2-203ENST00000630477 MROH2BQ7Z745 1585 aa20.31■□□□□ 0.84
PSMB2-203ENST00000630477 CYB5RLQ6IPT4 315 aa20.3■□□□□ 0.84
PSMB2-203ENST00000630477 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
PSMB2-203ENST00000630477 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
PSMB2-203ENST00000630477 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
PSMB2-203ENST00000630477 CFTRP13569 1480 aa20.16■□□□□ 0.82
PSMB2-203ENST00000630477 ZNF608Q9ULD9 1512 aaPredicted RBP20.1■□□□□ 0.81
PSMB2-203ENST00000630477 IFT140Q96RY7 1462 aa20.05■□□□□ 0.8
PSMB2-203ENST00000630477 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
PSMB2-203ENST00000630477 WIZO95785 1651 aa19.93■□□□□ 0.78
PSMB2-203ENST00000630477 EIF4G3O43432 1585 aaKnown RBP19.89■□□□□ 0.77
PSMB2-203ENST00000630477 CHD1O14646 1710 aa19.82■□□□□ 0.76
PSMB2-203ENST00000630477 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
PSMB2-203ENST00000630477 FBLN2P98095 1184 aa19.8■□□□□ 0.76
PSMB2-203ENST00000630477 AQRO60306 1485 aaKnown RBP eCLIP19.79■□□□□ 0.765e-7■■□□□ 12.8
PSMB2-203ENST00000630477 ILDR1Q86SU0 546 aaPredicted RBP19.73■□□□□ 0.75
PSMB2-203ENST00000630477 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
PSMB2-203ENST00000630477 ABCC8Q09428 1581 aa19.72■□□□□ 0.75
PSMB2-203ENST00000630477 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
PSMB2-203ENST00000630477 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
PSMB2-203ENST00000630477 DNMBPQ6XZF7 1577 aa19.64■□□□□ 0.73
PSMB2-203ENST00000630477 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
PSMB2-203ENST00000630477 GAPVD1Q14C86 1478 aa19.59■□□□□ 0.73
PSMB2-203ENST00000630477 SYNJ1O43426 1573 aa19.58■□□□□ 0.73
PSMB2-203ENST00000630477 POLA1P09884 1462 aaPredicted RBP19.57■□□□□ 0.72
PSMB2-203ENST00000630477 SNAPC4Q5SXM2 1469 aa19.56■□□□□ 0.72
PSMB2-203ENST00000630477 CHMP7Q8WUX9 453 aaPredicted RBP19.54■□□□□ 0.72
PSMB2-203ENST00000630477 TDRD9Q8NDG6 1382 aaKnown RBP19.54■□□□□ 0.72
PSMB2-203ENST00000630477 MAGI1Q96QZ7 1491 aaPredicted RBP19.5■□□□□ 0.71
PSMB2-203ENST00000630477 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
PSMB2-203ENST00000630477 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
PSMB2-203ENST00000630477 SOGA1O94964 1423 aa19.45■□□□□ 0.7
PSMB2-203ENST00000630477 SYNJ2O15056 1496 aa19.45■□□□□ 0.7
PSMB2-203ENST00000630477 WDR97A6NE52 1622 aa19.44■□□□□ 0.7
PSMB2-203ENST00000630477 GRIN2BQ13224 1484 aa19.41■□□□□ 0.7
PSMB2-203ENST00000630477 KDM4FA0A1W2PPD8 638 aa19.4■□□□□ 0.7
PSMB2-203ENST00000630477 ERCC6L2Q5T890 1561 aa19.31■□□□□ 0.68
PSMB2-203ENST00000630477 FGD5Q6ZNL6 1462 aa19.29■□□□□ 0.68
PSMB2-203ENST00000630477 KIF13AQ9H1H9 1805 aa19.25■□□□□ 0.67
PSMB2-203ENST00000630477 CEP170Q5SW79 1584 aa19.2■□□□□ 0.66
PSMB2-203ENST00000630477 ABCC10Q5T3U5 1492 aa19.19■□□□□ 0.66
PSMB2-203ENST00000630477 FAM69CQ0P6D2 419 aa19.18■□□□□ 0.66
PSMB2-203ENST00000630477 NUP160Q12769 1436 aa19.16■□□□□ 0.66
PSMB2-203ENST00000630477 GRIN2AQ12879 1464 aa19.15■□□□□ 0.66
PSMB2-203ENST00000630477 CUX1P39880 1505 aa19.13■□□□□ 0.65
PSMB2-203ENST00000630477 KDM6BO15054 1643 aa19.11■□□□□ 0.65
PSMB2-203ENST00000630477 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
PSMB2-203ENST00000630477 SHROOM2Q13796 1616 aa19.11■□□□□ 0.65
PSMB2-203ENST00000630477 MAPKBP1O60336 1514 aa19.08■□□□□ 0.64
PSMB2-203ENST00000630477 PLPPR3Q6T4P5 718 aa19.07■□□□□ 0.64
PSMB2-203ENST00000630477 DIP2BQ9P265 1576 aa19.06■□□□□ 0.64
PSMB2-203ENST00000630477 ABCA5Q8WWZ7 1642 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms