RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 NISCHQ9Y2I1 1504 aa22.38■■□□□ 1.17
TCF4-258ENST00000627320 ABCC9O60706 1549 aa20.97■□□□□ 0.95
TCF4-258ENST00000627320 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
TCF4-258ENST00000627320 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
TCF4-258ENST00000627320 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
TCF4-258ENST00000627320 UNC13AQ9UPW8 1703 aa19.48■□□□□ 0.71
TCF4-258ENST00000627320 PABPN1Q86U42 306 aaKnown RBP eCLIP19.4■□□□□ 0.7
TCF4-258ENST00000627320 NACADO15069 1562 aa19.25■□□□□ 0.67
TCF4-258ENST00000627320 BICRAQ9NZM4 1560 aa19.21■□□□□ 0.67
TCF4-258ENST00000627320 AEBP2Q6ZN18 517 aaPredicted RBP19.18■□□□□ 0.66
TCF4-258ENST00000627320 DCAF8L2P0C7V8 631 aa19.11■□□□□ 0.65
TCF4-258ENST00000627320 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
TCF4-258ENST00000627320 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
TCF4-258ENST00000627320 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
TCF4-258ENST00000627320 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
TCF4-258ENST00000627320 DNAJC5Q9H3Z4 198 aa18.7■□□□□ 0.58
TCF4-258ENST00000627320 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
TCF4-258ENST00000627320 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
TCF4-258ENST00000627320 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.56
TCF4-258ENST00000627320 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.54
TCF4-258ENST00000627320 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
TCF4-258ENST00000627320 CUX2O14529 1486 aa18.09■□□□□ 0.49
TCF4-258ENST00000627320 ERCC6Q03468 1493 aa18.01■□□□□ 0.47
TCF4-258ENST00000627320 NESP48681 1621 aa17.93■□□□□ 0.46
TCF4-258ENST00000627320 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.45
TCF4-258ENST00000627320 TRIM41Q8WV44 630 aa17.8■□□□□ 0.44
TCF4-258ENST00000627320 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
TCF4-258ENST00000627320 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
TCF4-258ENST00000627320 SMARCA2P51531 1590 aa17.72■□□□□ 0.43
TCF4-258ENST00000627320 ATAD2BQ9ULI0 1458 aa17.72■□□□□ 0.43
TCF4-258ENST00000627320 SMARCA4P51532 1647 aa17.66■□□□□ 0.42
TCF4-258ENST00000627320 HMGXB3Q12766 1538 aa17.64■□□□□ 0.41
TCF4-258ENST00000627320 BAZ1BQ9UIG0 1483 aaKnown RBP17.51■□□□□ 0.39
TCF4-258ENST00000627320 LAMC3Q9Y6N6 1575 aa17.51■□□□□ 0.39
TCF4-258ENST00000627320 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
TCF4-258ENST00000627320 PEG3Q9GZU2 1588 aa17.38■□□□□ 0.37
TCF4-258ENST00000627320 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
TCF4-258ENST00000627320 WDR62O43379 1518 aa17.34■□□□□ 0.37
TCF4-258ENST00000627320 MRC2Q9UBG0 1479 aa17.32■□□□□ 0.36
TCF4-258ENST00000627320 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
TCF4-258ENST00000627320 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
TCF4-258ENST00000627320 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
TCF4-258ENST00000627320 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
TCF4-258ENST00000627320 WIZO95785 1651 aa17.21■□□□□ 0.35
TCF4-258ENST00000627320 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
TCF4-258ENST00000627320 CEP164Q9UPV0 1460 aa17.14■□□□□ 0.33
TCF4-258ENST00000627320 OSCARQ8IYS5 282 aa17.1■□□□□ 0.33
TCF4-258ENST00000627320 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
TCF4-258ENST00000627320 URB2Q14146 1524 aaKnown RBP17.08■□□□□ 0.32
TCF4-258ENST00000627320 ARHGEF11O15085 1522 aa17.05■□□□□ 0.32
TCF4-258ENST00000627320 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
TCF4-258ENST00000627320 CHD1O14646 1710 aa16.96■□□□□ 0.31
TCF4-258ENST00000627320 PRDM2Q13029 1718 aa16.94■□□□□ 0.3
TCF4-258ENST00000627320 CFTRP13569 1480 aa16.93■□□□□ 0.3
TCF4-258ENST00000627320 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.29
TCF4-258ENST00000627320 ARAP1Q96P48 1450 aa16.88■□□□□ 0.29
TCF4-258ENST00000627320 CYB5RLQ6IPT4 315 aa16.86■□□□□ 0.29
TCF4-258ENST00000627320 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
TCF4-258ENST00000627320 TOP2AP11388 1531 aaKnown RBP16.79■□□□□ 0.28
TCF4-258ENST00000627320 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
TCF4-258ENST00000627320 IFT140Q96RY7 1462 aa16.77■□□□□ 0.28
TCF4-258ENST00000627320 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
TCF4-258ENST00000627320 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
TCF4-258ENST00000627320 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.26
TCF4-258ENST00000627320 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
TCF4-258ENST00000627320 DNMBPQ6XZF7 1577 aa16.63■□□□□ 0.25
TCF4-258ENST00000627320 FBLN2P98095 1184 aa16.62■□□□□ 0.25
TCF4-258ENST00000627320 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
TCF4-258ENST00000627320 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
TCF4-258ENST00000627320 RAD54L2Q9Y4B4 1467 aa16.57■□□□□ 0.24
TCF4-258ENST00000627320 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
TCF4-258ENST00000627320 SNAPC4Q5SXM2 1469 aa16.53■□□□□ 0.24
TCF4-258ENST00000627320 TDRD9Q8NDG6 1382 aaKnown RBP16.49■□□□□ 0.23
TCF4-258ENST00000627320 ERCC6L2Q5T890 1561 aa16.46■□□□□ 0.23
TCF4-258ENST00000627320 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
TCF4-258ENST00000627320 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
TCF4-258ENST00000627320 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
TCF4-258ENST00000627320 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
TCF4-258ENST00000627320 KIF13AQ9H1H9 1805 aa16.4■□□□□ 0.22
TCF4-258ENST00000627320 GAPVD1Q14C86 1478 aa16.39■□□□□ 0.21
TCF4-258ENST00000627320 FGD5Q6ZNL6 1462 aa16.38■□□□□ 0.21
TCF4-258ENST00000627320 SOGA1O94964 1423 aa16.36■□□□□ 0.21
TCF4-258ENST00000627320 CUX1P39880 1505 aa16.32■□□□□ 0.2
TCF4-258ENST00000627320 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
TCF4-258ENST00000627320 CHMP7Q8WUX9 453 aaPredicted RBP16.31■□□□□ 0.2
TCF4-258ENST00000627320 SYNJ2O15056 1496 aa16.3■□□□□ 0.2
TCF4-258ENST00000627320 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
TCF4-258ENST00000627320 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
TCF4-258ENST00000627320 CEP170Q5SW79 1584 aa16.24■□□□□ 0.19
TCF4-258ENST00000627320 SHROOM2Q13796 1616 aa16.16■□□□□ 0.18
TCF4-258ENST00000627320 ILDR1Q86SU0 546 aaPredicted RBP16.16■□□□□ 0.18
TCF4-258ENST00000627320 ADAMTS12P58397 1594 aa16.15■□□□□ 0.18
TCF4-258ENST00000627320 TSPOAP1O95153 1857 aa16.14■□□□□ 0.17
TCF4-258ENST00000627320 GRIN2AQ12879 1464 aa16.13■□□□□ 0.17
TCF4-258ENST00000627320 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
TCF4-258ENST00000627320 KDM4FA0A1W2PPD8 638 aa16.08■□□□□ 0.16
TCF4-258ENST00000627320 ABCA10Q8WWZ4 1543 aa16.08■□□□□ 0.16
TCF4-258ENST00000627320 DIP2BQ9P265 1576 aa16.06■□□□□ 0.16
TCF4-258ENST00000627320 NUP160Q12769 1436 aa16.06■□□□□ 0.16
TCF4-258ENST00000627320 KDM6BO15054 1643 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms