RNA–Protein interactions for RNA: ENST00000625791.2

TNFSF13-209, Transcript of TNF superfamily member 13, humanhuman

TSL 2 BASIC

Gene TNFSF13, Length 955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-209ENST00000625791 NISCHQ9Y2I1 1504 aa29.19■■■□□ 2.26
TNFSF13-209ENST00000625791 ABCC9O60706 1549 aa26.56■■□□□ 1.84
TNFSF13-209ENST00000625791 CCDC180Q9P1Z9 1646 aa26.21■■□□□ 1.79
TNFSF13-209ENST00000625791 AEBP2Q6ZN18 517 aaPredicted RBP25.92■■□□□ 1.74
TNFSF13-209ENST00000625791 DNAJC5BQ9UF47 199 aa25.21■■□□□ 1.63
TNFSF13-209ENST00000625791 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.61
TNFSF13-209ENST00000625791 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
TNFSF13-209ENST00000625791 NACADO15069 1562 aa24.92■■□□□ 1.58
TNFSF13-209ENST00000625791 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
TNFSF13-209ENST00000625791 PABPN1Q86U42 306 aaKnown RBP eCLIP24.77■■□□□ 1.56
TNFSF13-209ENST00000625791 MYO15BQ96JP2 1530 aa24.49■■□□□ 1.51
TNFSF13-209ENST00000625791 UNC13AQ9UPW8 1703 aa24.45■■□□□ 1.5
TNFSF13-209ENST00000625791 BICRAQ9NZM4 1560 aa24.39■■□□□ 1.5
TNFSF13-209ENST00000625791 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
TNFSF13-209ENST00000625791 DCAF1Q9Y4B6 1507 aa24.08■■□□□ 1.45
TNFSF13-209ENST00000625791 SHROOM4Q9ULL8 1493 aa24.06■■□□□ 1.44
TNFSF13-209ENST00000625791 CECR2Q9BXF3 1484 aa23.96■■□□□ 1.43
TNFSF13-209ENST00000625791 CC2D2AQ9P2K1 1620 aa23.94■■□□□ 1.42
TNFSF13-209ENST00000625791 SCRIBQ14160 1630 aa23.9■■□□□ 1.42
TNFSF13-209ENST00000625791 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
TNFSF13-209ENST00000625791 DNAJC5Q9H3Z4 198 aa23.35■■□□□ 1.33
TNFSF13-209ENST00000625791 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
TNFSF13-209ENST00000625791 CUX2O14529 1486 aa22.98■■□□□ 1.27
TNFSF13-209ENST00000625791 ERCC6Q03468 1493 aa22.96■■□□□ 1.27
TNFSF13-209ENST00000625791 ATAD2BQ9ULI0 1458 aa22.92■■□□□ 1.26
TNFSF13-209ENST00000625791 SMARCA2P51531 1590 aa22.82■■□□□ 1.24
TNFSF13-209ENST00000625791 HMGXB3Q12766 1538 aa22.78■■□□□ 1.24
TNFSF13-209ENST00000625791 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
TNFSF13-209ENST00000625791 NESP48681 1621 aa22.74■■□□□ 1.23
TNFSF13-209ENST00000625791 BAZ1BQ9UIG0 1483 aaKnown RBP22.67■■□□□ 1.22
TNFSF13-209ENST00000625791 BAZ1AQ9NRL2 1556 aaPredicted RBP22.66■■□□□ 1.22
TNFSF13-209ENST00000625791 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
TNFSF13-209ENST00000625791 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
TNFSF13-209ENST00000625791 MROH2BQ7Z745 1585 aa22.49■■□□□ 1.19
TNFSF13-209ENST00000625791 THOC2Q8NI27 1593 aaKnown RBP22.47■■□□□ 1.19
TNFSF13-209ENST00000625791 PDS5BQ9NTI5 1447 aa22.46■■□□□ 1.19
TNFSF13-209ENST00000625791 CADPSQ9ULU8 1353 aa22.36■■□□□ 1.17
TNFSF13-209ENST00000625791 KIF21AQ7Z4S6 1674 aa22.34■■□□□ 1.17
TNFSF13-209ENST00000625791 MRC2Q9UBG0 1479 aa22.23■■□□□ 1.15
TNFSF13-209ENST00000625791 TRIM41Q8WV44 630 aa22.21■■□□□ 1.15
TNFSF13-209ENST00000625791 SENP3Q9H4L4 574 aaPredicted RBP22.18■■□□□ 1.14
TNFSF13-209ENST00000625791 WIZO95785 1651 aa22.17■■□□□ 1.14
TNFSF13-209ENST00000625791 WDR62O43379 1518 aa22.16■■□□□ 1.14
TNFSF13-209ENST00000625791 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
TNFSF13-209ENST00000625791 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
TNFSF13-209ENST00000625791 CFTRP13569 1480 aa22.02■■□□□ 1.12
TNFSF13-209ENST00000625791 OSCARQ8IYS5 282 aa22■■□□□ 1.11
TNFSF13-209ENST00000625791 PHF23Q9BUL5 403 aaPredicted RBP21.99■■□□□ 1.11
TNFSF13-209ENST00000625791 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
TNFSF13-209ENST00000625791 TOP2AP11388 1531 aaKnown RBP21.88■■□□□ 1.09
TNFSF13-209ENST00000625791 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
TNFSF13-209ENST00000625791 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
TNFSF13-209ENST00000625791 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
TNFSF13-209ENST00000625791 ZNF608Q9ULD9 1512 aaPredicted RBP21.67■■□□□ 1.06
TNFSF13-209ENST00000625791 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
TNFSF13-209ENST00000625791 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
TNFSF13-209ENST00000625791 RIMBP3CA6NJZ7 1639 aa21.59■■□□□ 1.05
TNFSF13-209ENST00000625791 RIMBP3BA6NNM3 1639 aa21.59■■□□□ 1.05
TNFSF13-209ENST00000625791 RIMBP3Q9UFD9 1639 aa21.59■■□□□ 1.05
TNFSF13-209ENST00000625791 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
TNFSF13-209ENST00000625791 ARHGEF11O15085 1522 aa21.53■■□□□ 1.04
TNFSF13-209ENST00000625791 CYB5RLQ6IPT4 315 aa21.5■■□□□ 1.03
TNFSF13-209ENST00000625791 AQRO60306 1485 aaKnown RBP eCLIP21.47■■□□□ 1.03
TNFSF13-209ENST00000625791 DNMBPQ6XZF7 1577 aa21.47■■□□□ 1.03
TNFSF13-209ENST00000625791 EIF4G3O43432 1585 aaKnown RBP21.46■■□□□ 1.03
TNFSF13-209ENST00000625791 FBLN2P98095 1184 aa21.44■■□□□ 1.02
TNFSF13-209ENST00000625791 TARBP1Q13395 1621 aaKnown RBP21.39■■□□□ 1.01
TNFSF13-209ENST00000625791 POLA1P09884 1462 aaPredicted RBP21.37■■□□□ 1.01
TNFSF13-209ENST00000625791 TRHP20396 242 aaPredicted RBP21.34■■□□□ 1.01
TNFSF13-209ENST00000625791 TDRD9Q8NDG6 1382 aaKnown RBP21.33■■□□□ 1
TNFSF13-209ENST00000625791 SOGA1O94964 1423 aa21.32■■□□□ 1
TNFSF13-209ENST00000625791 CHD1O14646 1710 aa21.32■■□□□ 1
TNFSF13-209ENST00000625791 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
TNFSF13-209ENST00000625791 ARAP1Q96P48 1450 aa21.3■■□□□ 1
TNFSF13-209ENST00000625791 CHMP7Q8WUX9 453 aaPredicted RBP21.24■□□□□ 0.99
TNFSF13-209ENST00000625791 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
TNFSF13-209ENST00000625791 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
TNFSF13-209ENST00000625791 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
TNFSF13-209ENST00000625791 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
TNFSF13-209ENST00000625791 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
TNFSF13-209ENST00000625791 CUX1P39880 1505 aa21.13■□□□□ 0.97
TNFSF13-209ENST00000625791 CLASP1Q7Z460 1538 aa21.12■□□□□ 0.97
TNFSF13-209ENST00000625791 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
TNFSF13-209ENST00000625791 SYNJ2O15056 1496 aa21.08■□□□□ 0.97
TNFSF13-209ENST00000625791 GAPVD1Q14C86 1478 aa21.02■□□□□ 0.96
TNFSF13-209ENST00000625791 ABCA10Q8WWZ4 1543 aa20.94■□□□□ 0.94
TNFSF13-209ENST00000625791 PBRM1Q86U86 1689 aa20.91■□□□□ 0.94
TNFSF13-209ENST00000625791 SUPT5HO00267 1087 aaKnown RBP20.88■□□□□ 0.93
TNFSF13-209ENST00000625791 ABCA5Q8WWZ7 1642 aa20.88■□□□□ 0.93
TNFSF13-209ENST00000625791 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
TNFSF13-209ENST00000625791 GRIN2AQ12879 1464 aa20.84■□□□□ 0.93
TNFSF13-209ENST00000625791 NUP160Q12769 1436 aa20.79■□□□□ 0.92
TNFSF13-209ENST00000625791 ERCC6L2Q5T890 1561 aa20.79■□□□□ 0.92
TNFSF13-209ENST00000625791 FHAD1B1AJZ9 1412 aa20.77■□□□□ 0.91
TNFSF13-209ENST00000625791 CEP170Q5SW79 1584 aa20.75■□□□□ 0.91
TNFSF13-209ENST00000625791 ADAMTS12P58397 1594 aa20.74■□□□□ 0.91
TNFSF13-209ENST00000625791 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
TNFSF13-209ENST00000625791 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
TNFSF13-209ENST00000625791 ERICH3Q5RHP9 1530 aa20.67■□□□□ 0.9
TNFSF13-209ENST00000625791 SHROOM2Q13796 1616 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms