RNA–Protein interactions for RNA: ENST00000623449.3

CU633967.1-202, humanhuman

TSL 5 BASIC

Gene CU633967.1, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU633967.1-202ENST00000623449 NISCHQ9Y2I1 1504 aa22■■□□□ 1.11
CU633967.1-202ENST00000623449 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
CU633967.1-202ENST00000623449 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
CU633967.1-202ENST00000623449 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
CU633967.1-202ENST00000623449 ABCC9O60706 1549 aa19.38■□□□□ 0.69
CU633967.1-202ENST00000623449 RB1CC1Q8TDY2 1594 aa18.65■□□□□ 0.58
CU633967.1-202ENST00000623449 NACADO15069 1562 aa18.6■□□□□ 0.57
CU633967.1-202ENST00000623449 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
CU633967.1-202ENST00000623449 ZCCHC6Q5VYS8 1495 aaKnown RBP18.3■□□□□ 0.52
CU633967.1-202ENST00000623449 DCAF1Q9Y4B6 1507 aa18.29■□□□□ 0.52
CU633967.1-202ENST00000623449 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
CU633967.1-202ENST00000623449 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
CU633967.1-202ENST00000623449 BICRAQ9NZM4 1560 aa18.09■□□□□ 0.49
CU633967.1-202ENST00000623449 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
CU633967.1-202ENST00000623449 PABPN1Q86U42 306 aaKnown RBP eCLIP17.99■□□□□ 0.47
CU633967.1-202ENST00000623449 DNAJC5BQ9UF47 199 aa17.99■□□□□ 0.47
CU633967.1-202ENST00000623449 SCRIBQ14160 1630 aa17.85■□□□□ 0.45
CU633967.1-202ENST00000623449 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
CU633967.1-202ENST00000623449 CC2D2AQ9P2K1 1620 aa17.6■□□□□ 0.41
CU633967.1-202ENST00000623449 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
CU633967.1-202ENST00000623449 PHF23Q9BUL5 403 aaPredicted RBP17.27■□□□□ 0.36
CU633967.1-202ENST00000623449 NCAPD3P42695 1498 aa17.15■□□□□ 0.34
CU633967.1-202ENST00000623449 SMARCA4P51532 1647 aa17.13■□□□□ 0.33
CU633967.1-202ENST00000623449 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
CU633967.1-202ENST00000623449 BAZ1AQ9NRL2 1556 aaPredicted RBP17.09■□□□□ 0.33
CU633967.1-202ENST00000623449 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
CU633967.1-202ENST00000623449 HMGXB3Q12766 1538 aa17.07■□□□□ 0.32
CU633967.1-202ENST00000623449 PEG3Q9GZU2 1588 aa17.05■□□□□ 0.32
CU633967.1-202ENST00000623449 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
CU633967.1-202ENST00000623449 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
CU633967.1-202ENST00000623449 CUX2O14529 1486 aa16.77■□□□□ 0.28
CU633967.1-202ENST00000623449 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
CU633967.1-202ENST00000623449 ERCC6Q03468 1493 aa16.74■□□□□ 0.27
CU633967.1-202ENST00000623449 NESP48681 1621 aa16.7■□□□□ 0.26
CU633967.1-202ENST00000623449 WIZO95785 1651 aa16.69■□□□□ 0.26
CU633967.1-202ENST00000623449 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
CU633967.1-202ENST00000623449 THOC2Q8NI27 1593 aaKnown RBP16.61■□□□□ 0.25
CU633967.1-202ENST00000623449 PDS5BQ9NTI5 1447 aa16.6■□□□□ 0.25
CU633967.1-202ENST00000623449 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
CU633967.1-202ENST00000623449 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
CU633967.1-202ENST00000623449 TOP2AP11388 1531 aaKnown RBP16.56■□□□□ 0.24
CU633967.1-202ENST00000623449 CFTRP13569 1480 aa16.48■□□□□ 0.23
CU633967.1-202ENST00000623449 DNAJC5Q9H3Z4 198 aa16.47■□□□□ 0.23
CU633967.1-202ENST00000623449 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
CU633967.1-202ENST00000623449 MRC2Q9UBG0 1479 aa16.44■□□□□ 0.22
CU633967.1-202ENST00000623449 WDR62O43379 1518 aa16.44■□□□□ 0.22
CU633967.1-202ENST00000623449 CEP164Q9UPV0 1460 aa16.4■□□□□ 0.22
CU633967.1-202ENST00000623449 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
CU633967.1-202ENST00000623449 FANCD2Q9BXW9 1451 aa16.38■□□□□ 0.21
CU633967.1-202ENST00000623449 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
CU633967.1-202ENST00000623449 URB2Q14146 1524 aaKnown RBP16.24■□□□□ 0.19
CU633967.1-202ENST00000623449 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
CU633967.1-202ENST00000623449 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
CU633967.1-202ENST00000623449 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
CU633967.1-202ENST00000623449 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
CU633967.1-202ENST00000623449 IFT140Q96RY7 1462 aa16.09■□□□□ 0.17
CU633967.1-202ENST00000623449 TARBP1Q13395 1621 aaKnown RBP15.99■□□□□ 0.15
CU633967.1-202ENST00000623449 ZNF608Q9ULD9 1512 aaPredicted RBP15.98■□□□□ 0.15
CU633967.1-202ENST00000623449 POLA1P09884 1462 aaPredicted RBP15.96■□□□□ 0.14
CU633967.1-202ENST00000623449 EIF4G3O43432 1585 aaKnown RBP15.96■□□□□ 0.14
CU633967.1-202ENST00000623449 WDR97A6NE52 1622 aa15.94■□□□□ 0.14
CU633967.1-202ENST00000623449 OSCARQ8IYS5 282 aa15.92■□□□□ 0.14
CU633967.1-202ENST00000623449 CUX1P39880 1505 aa15.89■□□□□ 0.13
CU633967.1-202ENST00000623449 FGD5Q6ZNL6 1462 aa15.85■□□□□ 0.13
CU633967.1-202ENST00000623449 SOGA1O94964 1423 aa15.84■□□□□ 0.13
CU633967.1-202ENST00000623449 AQRO60306 1485 aaKnown RBP eCLIP15.83■□□□□ 0.12
CU633967.1-202ENST00000623449 SUPT5HO00267 1087 aaKnown RBP15.82■□□□□ 0.12
CU633967.1-202ENST00000623449 RAD54L2Q9Y4B4 1467 aa15.82■□□□□ 0.12
CU633967.1-202ENST00000623449 CHD1O14646 1710 aa15.8■□□□□ 0.12
CU633967.1-202ENST00000623449 MAGI1Q96QZ7 1491 aaPredicted RBP15.76■□□□□ 0.11
CU633967.1-202ENST00000623449 ABCA10Q8WWZ4 1543 aa15.75■□□□□ 0.11
CU633967.1-202ENST00000623449 RIMBP3CA6NJZ7 1639 aa15.74■□□□□ 0.11
CU633967.1-202ENST00000623449 RIMBP3BA6NNM3 1639 aa15.74■□□□□ 0.11
CU633967.1-202ENST00000623449 RIMBP3Q9UFD9 1639 aa15.74■□□□□ 0.11
CU633967.1-202ENST00000623449 BIVM-ERCC5R4GMW8 1640 aa15.74■□□□□ 0.11
CU633967.1-202ENST00000623449 TDRD9Q8NDG6 1382 aaKnown RBP15.74■□□□□ 0.11
CU633967.1-202ENST00000623449 GRIN2BQ13224 1484 aa15.73■□□□□ 0.11
CU633967.1-202ENST00000623449 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
CU633967.1-202ENST00000623449 ARHGEF11O15085 1522 aa15.72■□□□□ 0.11
CU633967.1-202ENST00000623449 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
CU633967.1-202ENST00000623449 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.11
CU633967.1-202ENST00000623449 PBRM1Q86U86 1689 aa15.7■□□□□ 0.1
CU633967.1-202ENST00000623449 GAPVD1Q14C86 1478 aa15.68■□□□□ 0.1
CU633967.1-202ENST00000623449 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
CU633967.1-202ENST00000623449 SYNJ2O15056 1496 aa15.67■□□□□ 0.1
CU633967.1-202ENST00000623449 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
CU633967.1-202ENST00000623449 CLASP1Q7Z460 1538 aa15.66■□□□□ 0.1
CU633967.1-202ENST00000623449 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
CU633967.1-202ENST00000623449 FBLN2P98095 1184 aa15.58■□□□□ 0.08
CU633967.1-202ENST00000623449 CHMP7Q8WUX9 453 aaPredicted RBP15.58■□□□□ 0.08
CU633967.1-202ENST00000623449 ADAMTS12P58397 1594 aa15.58■□□□□ 0.08
CU633967.1-202ENST00000623449 ARAP1Q96P48 1450 aa15.57■□□□□ 0.08
CU633967.1-202ENST00000623449 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
CU633967.1-202ENST00000623449 GRIN2AQ12879 1464 aa15.53■□□□□ 0.08
CU633967.1-202ENST00000623449 FHAD1B1AJZ9 1412 aa15.51■□□□□ 0.07
CU633967.1-202ENST00000623449 NUP160Q12769 1436 aa15.51■□□□□ 0.07
CU633967.1-202ENST00000623449 CYB5RLQ6IPT4 315 aa15.46■□□□□ 0.07
CU633967.1-202ENST00000623449 CEP170Q5SW79 1584 aa15.45■□□□□ 0.06
CU633967.1-202ENST00000623449 SHROOM2Q13796 1616 aa15.45■□□□□ 0.06
CU633967.1-202ENST00000623449 CUL7Q14999 1698 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms