RNA–Protein interactions for RNA: ENST00000621420.5

SRP19-208, Transcript of signal recognition particle 19, humanhuman

TSL 3 BASIC

Gene SRP19, Length 1,270 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP19-208ENST00000621420 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
SRP19-208ENST00000621420 ABCC9O60706 1549 aa29.02■■■□□ 2.24
SRP19-208ENST00000621420 AEBP2Q6ZN18 517 aaPredicted RBP28.41■■■□□ 2.14
SRP19-208ENST00000621420 DNAJC5BQ9UF47 199 aa28.15■■■□□ 2.1
SRP19-208ENST00000621420 CCDC180Q9P1Z9 1646 aa27.98■■■□□ 2.07
SRP19-208ENST00000621420 RB1CC1Q8TDY2 1594 aa27.12■■□□□ 1.93
SRP19-208ENST00000621420 PABPN1Q86U42 306 aaKnown RBP eCLIP26.89■■□□□ 1.9
SRP19-208ENST00000621420 NACADO15069 1562 aa26.69■■□□□ 1.86
SRP19-208ENST00000621420 CHIC1Q5VXU3 224 aa26.62■■□□□ 1.85
SRP19-208ENST00000621420 UNC13AQ9UPW8 1703 aa26.57■■□□□ 1.84
SRP19-208ENST00000621420 DNAJC5Q9H3Z4 198 aa26.49■■□□□ 1.83
SRP19-208ENST00000621420 DCAF8L2P0C7V8 631 aa26.44■■□□□ 1.82
SRP19-208ENST00000621420 BICRAQ9NZM4 1560 aa26.43■■□□□ 1.82
SRP19-208ENST00000621420 CECR2Q9BXF3 1484 aa26.22■■□□□ 1.79
SRP19-208ENST00000621420 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.78
SRP19-208ENST00000621420 MYO15BQ96JP2 1530 aa25.96■■□□□ 1.75
SRP19-208ENST00000621420 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
SRP19-208ENST00000621420 EIF4G1Q04637 1599 aaKnown RBP25.83■■□□□ 1.73
SRP19-208ENST00000621420 SCRIBQ14160 1630 aa25.51■■□□□ 1.67
SRP19-208ENST00000621420 CUX2O14529 1486 aa25.34■■□□□ 1.65
SRP19-208ENST00000621420 DCAF1Q9Y4B6 1507 aa25.29■■□□□ 1.64
SRP19-208ENST00000621420 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
SRP19-208ENST00000621420 ERCC6Q03468 1493 aa25.09■■□□□ 1.61
SRP19-208ENST00000621420 TRIM41Q8WV44 630 aa24.97■■□□□ 1.59
SRP19-208ENST00000621420 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
SRP19-208ENST00000621420 NESP48681 1621 aa24.67■■□□□ 1.54
SRP19-208ENST00000621420 THOC2Q8NI27 1593 aaKnown RBP24.58■■□□□ 1.52
SRP19-208ENST00000621420 ATAD2BQ9ULI0 1458 aa24.48■■□□□ 1.51
SRP19-208ENST00000621420 SENP3Q9H4L4 574 aaPredicted RBP24.45■■□□□ 1.5
SRP19-208ENST00000621420 SMARCA2P51531 1590 aa24.38■■□□□ 1.49
SRP19-208ENST00000621420 HMGXB3Q12766 1538 aa24.38■■□□□ 1.49
SRP19-208ENST00000621420 KIF21AQ7Z4S6 1674 aa24.3■■□□□ 1.48
SRP19-208ENST00000621420 LAMC3Q9Y6N6 1575 aa24.25■■□□□ 1.47
SRP19-208ENST00000621420 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
SRP19-208ENST00000621420 BAZ1BQ9UIG0 1483 aaKnown RBP24.18■■□□□ 1.46
SRP19-208ENST00000621420 PDS5BQ9NTI5 1447 aa24.15■■□□□ 1.46
SRP19-208ENST00000621420 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
SRP19-208ENST00000621420 OSCARQ8IYS5 282 aa24.05■■□□□ 1.44
SRP19-208ENST00000621420 MRC2Q9UBG0 1479 aa24.02■■□□□ 1.44
SRP19-208ENST00000621420 PHF23Q9BUL5 403 aaPredicted RBP23.99■■□□□ 1.43
SRP19-208ENST00000621420 WDR62O43379 1518 aa23.99■■□□□ 1.43
SRP19-208ENST00000621420 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.42
SRP19-208ENST00000621420 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
SRP19-208ENST00000621420 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
SRP19-208ENST00000621420 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
SRP19-208ENST00000621420 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
SRP19-208ENST00000621420 CEP164Q9UPV0 1460 aa23.73■■□□□ 1.39
SRP19-208ENST00000621420 MROH2BQ7Z745 1585 aa23.72■■□□□ 1.39
SRP19-208ENST00000621420 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
SRP19-208ENST00000621420 TRHP20396 242 aaPredicted RBP23.64■■□□□ 1.37
SRP19-208ENST00000621420 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
SRP19-208ENST00000621420 CYB5RLQ6IPT4 315 aa23.59■■□□□ 1.37
SRP19-208ENST00000621420 URB2Q14146 1524 aaKnown RBP23.52■■□□□ 1.36
SRP19-208ENST00000621420 ZNF608Q9ULD9 1512 aaPredicted RBP23.41■■□□□ 1.34
SRP19-208ENST00000621420 CFTRP13569 1480 aa23.4■■□□□ 1.34
SRP19-208ENST00000621420 ARAP1Q96P48 1450 aa23.4■■□□□ 1.34
SRP19-208ENST00000621420 WIZO95785 1651 aa23.4■■□□□ 1.34
SRP19-208ENST00000621420 IFT140Q96RY7 1462 aa23.28■■□□□ 1.32
SRP19-208ENST00000621420 CHD1O14646 1710 aa23.22■■□□□ 1.31
SRP19-208ENST00000621420 EIF4G3O43432 1585 aaKnown RBP23.19■■□□□ 1.3
SRP19-208ENST00000621420 RSF1Q96T23 1441 aaPredicted RBP23.17■■□□□ 1.3
SRP19-208ENST00000621420 FBLN2P98095 1184 aa23.1■■□□□ 1.29
SRP19-208ENST00000621420 PRDM2Q13029 1718 aa23.08■■□□□ 1.28
SRP19-208ENST00000621420 TOPBP1Q92547 1522 aa23.08■■□□□ 1.28
SRP19-208ENST00000621420 AQRO60306 1485 aaKnown RBP eCLIP23.06■■□□□ 1.282e-6■■■□□ 14.7
SRP19-208ENST00000621420 TOP2AP11388 1531 aaKnown RBP22.98■■□□□ 1.27
SRP19-208ENST00000621420 TARBP1Q13395 1621 aaKnown RBP22.95■■□□□ 1.26
SRP19-208ENST00000621420 CLASP1Q7Z460 1538 aa22.91■■□□□ 1.26
SRP19-208ENST00000621420 ABCC8Q09428 1581 aa22.89■■□□□ 1.26
SRP19-208ENST00000621420 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.25
SRP19-208ENST00000621420 FOXD1Q16676 465 aa22.87■■□□□ 1.25
SRP19-208ENST00000621420 POTEDQ86YR6 584 aa22.83■■□□□ 1.25
SRP19-208ENST00000621420 ILDR1Q86SU0 546 aaPredicted RBP22.82■■□□□ 1.24
SRP19-208ENST00000621420 SYNJ1O43426 1573 aa22.78■■□□□ 1.24
SRP19-208ENST00000621420 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
SRP19-208ENST00000621420 SNAPC4Q5SXM2 1469 aa22.78■■□□□ 1.24
SRP19-208ENST00000621420 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
SRP19-208ENST00000621420 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
SRP19-208ENST00000621420 GAPVD1Q14C86 1478 aa22.75■■□□□ 1.23
SRP19-208ENST00000621420 RAD54L2Q9Y4B4 1467 aa22.75■■□□□ 1.23
SRP19-208ENST00000621420 CHMP7Q8WUX9 453 aaPredicted RBP22.74■■□□□ 1.23
SRP19-208ENST00000621420 SUPT5HO00267 1087 aaKnown RBP22.66■■□□□ 1.22
SRP19-208ENST00000621420 SOGA1O94964 1423 aa22.65■■□□□ 1.22
SRP19-208ENST00000621420 MAGI1Q96QZ7 1491 aaPredicted RBP22.63■■□□□ 1.21
SRP19-208ENST00000621420 SYNJ2O15056 1496 aa22.59■■□□□ 1.21
SRP19-208ENST00000621420 WDR97A6NE52 1622 aa22.57■■□□□ 1.2
SRP19-208ENST00000621420 ERCC6L2Q5T890 1561 aa22.55■■□□□ 1.2
SRP19-208ENST00000621420 GRIN2BQ13224 1484 aa22.54■■□□□ 1.2
SRP19-208ENST00000621420 KIF13AQ9H1H9 1805 aa22.53■■□□□ 1.2
SRP19-208ENST00000621420 FGD5Q6ZNL6 1462 aa22.5■■□□□ 1.19
SRP19-208ENST00000621420 KDM4FA0A1W2PPD8 638 aa22.5■■□□□ 1.19
SRP19-208ENST00000621420 PBRM1Q86U86 1689 aa22.42■■□□□ 1.18
SRP19-208ENST00000621420 CEP170Q5SW79 1584 aa22.36■■□□□ 1.17
SRP19-208ENST00000621420 CUX1P39880 1505 aa22.34■■□□□ 1.17
SRP19-208ENST00000621420 FAM69CQ0P6D2 419 aa22.3■■□□□ 1.16
SRP19-208ENST00000621420 GRIN2AQ12879 1464 aa22.27■■□□□ 1.16
SRP19-208ENST00000621420 ABCC10Q5T3U5 1492 aa22.25■■□□□ 1.15
SRP19-208ENST00000621420 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
SRP19-208ENST00000621420 KDM6BO15054 1643 aa22.24■■□□□ 1.15
SRP19-208ENST00000621420 ABCA5Q8WWZ7 1642 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms