RNA–Protein interactions for RNA: ENST00000615042.1

RITA1-204, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

Gene RITA1, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-204ENST00000615042 NISCHQ9Y2I1 1504 aa27.41■■□□□ 1.98
RITA1-204ENST00000615042 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
RITA1-204ENST00000615042 ABCC9O60706 1549 aa24.3■■□□□ 1.48
RITA1-204ENST00000615042 RB1CC1Q8TDY2 1594 aa23.28■■□□□ 1.32
RITA1-204ENST00000615042 NACADO15069 1562 aa23.16■■□□□ 1.3
RITA1-204ENST00000615042 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
RITA1-204ENST00000615042 DCAF8L2P0C7V8 631 aa22.89■■□□□ 1.25
RITA1-204ENST00000615042 UNC13AQ9UPW8 1703 aa22.81■■□□□ 1.24
RITA1-204ENST00000615042 ZCCHC6Q5VYS8 1495 aaKnown RBP22.79■■□□□ 1.24
RITA1-204ENST00000615042 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
RITA1-204ENST00000615042 BICRAQ9NZM4 1560 aa22.59■■□□□ 1.21
RITA1-204ENST00000615042 PABPN1Q86U42 306 aaKnown RBP eCLIP22.58■■□□□ 1.21
RITA1-204ENST00000615042 DNAJC5BQ9UF47 199 aa22.55■■□□□ 1.2
RITA1-204ENST00000615042 SCRIBQ14160 1630 aa22.37■■□□□ 1.17
RITA1-204ENST00000615042 SHROOM4Q9ULL8 1493 aa22.35■■□□□ 1.17
RITA1-204ENST00000615042 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
RITA1-204ENST00000615042 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
RITA1-204ENST00000615042 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
RITA1-204ENST00000615042 CC2D2AQ9P2K1 1620 aa22.01■■□□□ 1.11
RITA1-204ENST00000615042 CECR2Q9BXF3 1484 aa21.89■■□□□ 1.09
RITA1-204ENST00000615042 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
RITA1-204ENST00000615042 NCAPD3P42695 1498 aa21.34■■□□□ 1.01
RITA1-204ENST00000615042 ATAD2BQ9ULI0 1458 aa21.3■■□□□ 1
RITA1-204ENST00000615042 SMARCA2P51531 1590 aa21.29■■□□□ 1
RITA1-204ENST00000615042 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
RITA1-204ENST00000615042 HMGXB3Q12766 1538 aa21.26■□□□□ 0.99
RITA1-204ENST00000615042 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
RITA1-204ENST00000615042 BAZ1BQ9UIG0 1483 aaKnown RBP21.12■□□□□ 0.97
RITA1-204ENST00000615042 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
RITA1-204ENST00000615042 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
RITA1-204ENST00000615042 NESP48681 1621 aa20.93■□□□□ 0.94
RITA1-204ENST00000615042 CUX2O14529 1486 aa20.93■□□□□ 0.94
RITA1-204ENST00000615042 WIZO95785 1651 aa20.89■□□□□ 0.93
RITA1-204ENST00000615042 LAMC3Q9Y6N6 1575 aa20.89■□□□□ 0.93
RITA1-204ENST00000615042 THOC2Q8NI27 1593 aaKnown RBP20.77■□□□□ 0.92
RITA1-204ENST00000615042 KIF21AQ7Z4S6 1674 aa20.75■□□□□ 0.91
RITA1-204ENST00000615042 RSF1Q96T23 1441 aaPredicted RBP20.71■□□□□ 0.91
RITA1-204ENST00000615042 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
RITA1-204ENST00000615042 CADPSQ9ULU8 1353 aa20.67■□□□□ 0.9
RITA1-204ENST00000615042 TOP2AP11388 1531 aaKnown RBP20.66■□□□□ 0.9
RITA1-204ENST00000615042 DNAJC5Q9H3Z4 198 aa20.6■□□□□ 0.89
RITA1-204ENST00000615042 MRC2Q9UBG0 1479 aa20.54■□□□□ 0.88
RITA1-204ENST00000615042 WDR62O43379 1518 aa20.51■□□□□ 0.87
RITA1-204ENST00000615042 CFTRP13569 1480 aa20.5■□□□□ 0.87
RITA1-204ENST00000615042 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
RITA1-204ENST00000615042 FANCD2Q9BXW9 1451 aa20.47■□□□□ 0.87
RITA1-204ENST00000615042 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
RITA1-204ENST00000615042 CCDC88BA6NC98 1476 aa20.36■□□□□ 0.85
RITA1-204ENST00000615042 URB2Q14146 1524 aaKnown RBP20.3■□□□□ 0.84
RITA1-204ENST00000615042 TOPBP1Q92547 1522 aa20.12■□□□□ 0.81
RITA1-204ENST00000615042 ABCC8Q09428 1581 aa20.08■□□□□ 0.81
RITA1-204ENST00000615042 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.81
RITA1-204ENST00000615042 IFT140Q96RY7 1462 aa20.07■□□□□ 0.8
RITA1-204ENST00000615042 ZNF608Q9ULD9 1512 aaPredicted RBP20■□□□□ 0.79
RITA1-204ENST00000615042 EIF4G3O43432 1585 aaKnown RBP19.97■□□□□ 0.79
RITA1-204ENST00000615042 TARBP1Q13395 1621 aaKnown RBP19.95■□□□□ 0.78
RITA1-204ENST00000615042 POLA1P09884 1462 aaPredicted RBP19.92■□□□□ 0.78
RITA1-204ENST00000615042 OSCARQ8IYS5 282 aa19.89■□□□□ 0.77
RITA1-204ENST00000615042 CUX1P39880 1505 aa19.83■□□□□ 0.77
RITA1-204ENST00000615042 SUPT5HO00267 1087 aaKnown RBP19.83■□□□□ 0.77
RITA1-204ENST00000615042 FGD5Q6ZNL6 1462 aa19.82■□□□□ 0.76
RITA1-204ENST00000615042 WDR97A6NE52 1622 aa19.81■□□□□ 0.76
RITA1-204ENST00000615042 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.76
RITA1-204ENST00000615042 RAD54L2Q9Y4B4 1467 aa19.8■□□□□ 0.76
RITA1-204ENST00000615042 CHD1O14646 1710 aa19.79■□□□□ 0.76
RITA1-204ENST00000615042 SOGA1O94964 1423 aa19.78■□□□□ 0.76
RITA1-204ENST00000615042 TRIM41Q8WV44 630 aa19.75■□□□□ 0.75
RITA1-204ENST00000615042 RIMBP3CA6NJZ7 1639 aa19.73■□□□□ 0.75
RITA1-204ENST00000615042 RIMBP3BA6NNM3 1639 aa19.73■□□□□ 0.75
RITA1-204ENST00000615042 RIMBP3Q9UFD9 1639 aa19.73■□□□□ 0.75
RITA1-204ENST00000615042 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
RITA1-204ENST00000615042 SNAPC4Q5SXM2 1469 aa19.67■□□□□ 0.74
RITA1-204ENST00000615042 ARHGEF11O15085 1522 aa19.66■□□□□ 0.74
RITA1-204ENST00000615042 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
RITA1-204ENST00000615042 MAGI1Q96QZ7 1491 aaPredicted RBP19.64■□□□□ 0.73
RITA1-204ENST00000615042 GRIN2BQ13224 1484 aa19.63■□□□□ 0.73
RITA1-204ENST00000615042 BIVM-ERCC5R4GMW8 1640 aa19.62■□□□□ 0.73
RITA1-204ENST00000615042 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
RITA1-204ENST00000615042 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
RITA1-204ENST00000615042 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
RITA1-204ENST00000615042 FBLN2P98095 1184 aa19.58■□□□□ 0.72
RITA1-204ENST00000615042 GAPVD1Q14C86 1478 aa19.57■□□□□ 0.72
RITA1-204ENST00000615042 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
RITA1-204ENST00000615042 CLASP1Q7Z460 1538 aa19.56■□□□□ 0.72
RITA1-204ENST00000615042 SYNJ2O15056 1496 aa19.55■□□□□ 0.72
RITA1-204ENST00000615042 WRNQ14191 1432 aaPredicted RBP eCLIP19.54■□□□□ 0.72
RITA1-204ENST00000615042 CHMP7Q8WUX9 453 aaPredicted RBP19.49■□□□□ 0.71
RITA1-204ENST00000615042 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
RITA1-204ENST00000615042 ADAMTS12P58397 1594 aa19.44■□□□□ 0.7
RITA1-204ENST00000615042 PHF23Q9BUL5 403 aaPredicted RBP19.42■□□□□ 0.7
RITA1-204ENST00000615042 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
RITA1-204ENST00000615042 GRIN2AQ12879 1464 aa19.39■□□□□ 0.69
RITA1-204ENST00000615042 ERICH3Q5RHP9 1530 aa19.39■□□□□ 0.69
RITA1-204ENST00000615042 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
RITA1-204ENST00000615042 CEP170Q5SW79 1584 aa19.33■□□□□ 0.69
RITA1-204ENST00000615042 NUP160Q12769 1436 aa19.32■□□□□ 0.68
RITA1-204ENST00000615042 SHROOM2Q13796 1616 aa19.26■□□□□ 0.67
RITA1-204ENST00000615042 ERCC6L2Q5T890 1561 aa19.22■□□□□ 0.67
RITA1-204ENST00000615042 RUSC2Q8N2Y8 1516 aa19.18■□□□□ 0.66
RITA1-204ENST00000615042 CUL7Q14999 1698 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms