RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 NISCHQ9Y2I1 1504 aa18.07■□□□□ 0.48
TARDBP-216ENST00000614494 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
TARDBP-216ENST00000614494 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
TARDBP-216ENST00000614494 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
TARDBP-216ENST00000614494 ABCC9O60706 1549 aa16.11■□□□□ 0.17
TARDBP-216ENST00000614494 RB1CC1Q8TDY2 1594 aa15.5■□□□□ 0.07
TARDBP-216ENST00000614494 NACADO15069 1562 aa15.41■□□□□ 0.06
TARDBP-216ENST00000614494 MYO15BQ96JP2 1530 aa15.28■□□□□ 0.04
TARDBP-216ENST00000614494 SENP3Q9H4L4 574 aaPredicted RBP15.24■□□□□ 0.03
TARDBP-216ENST00000614494 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
TARDBP-216ENST00000614494 DCAF1Q9Y4B6 1507 aa15.05■□□□□ -0
TARDBP-216ENST00000614494 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
TARDBP-216ENST00000614494 ZCCHC6Q5VYS8 1495 aaKnown RBP14.99□□□□□ -0.01
TARDBP-216ENST00000614494 UNC13AQ9UPW8 1703 aa14.97□□□□□ -0.01
TARDBP-216ENST00000614494 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
TARDBP-216ENST00000614494 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
TARDBP-216ENST00000614494 BICRAQ9NZM4 1560 aa14.91□□□□□ -0.02
TARDBP-216ENST00000614494 PHF23Q9BUL5 403 aaPredicted RBP14.81□□□□□ -0.04
TARDBP-216ENST00000614494 SCRIBQ14160 1630 aa14.7□□□□□ -0.06
TARDBP-216ENST00000614494 EIF4G1Q04637 1599 aaKnown RBP14.61□□□□□ -0.07
TARDBP-216ENST00000614494 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
TARDBP-216ENST00000614494 CECR2Q9BXF3 1484 aa14.59□□□□□ -0.07
TARDBP-216ENST00000614494 NCAPD3P42695 1498 aa14.19□□□□□ -0.14
TARDBP-216ENST00000614494 SMARCA2P51531 1590 aa14.15□□□□□ -0.14
TARDBP-216ENST00000614494 HMGXB3Q12766 1538 aa14.13□□□□□ -0.15
TARDBP-216ENST00000614494 BAZ1AQ9NRL2 1556 aaPredicted RBP14.09□□□□□ -0.15
TARDBP-216ENST00000614494 ATAD2BQ9ULI0 1458 aa14.09□□□□□ -0.15
TARDBP-216ENST00000614494 SMARCA4P51532 1647 aa14.08□□□□□ -0.15
TARDBP-216ENST00000614494 CUX2O14529 1486 aa14.06□□□□□ -0.16
TARDBP-216ENST00000614494 FOXD1Q16676 465 aa14.05□□□□□ -0.16
TARDBP-216ENST00000614494 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
TARDBP-216ENST00000614494 PEG3Q9GZU2 1588 aa14.03□□□□□ -0.16
TARDBP-216ENST00000614494 ERCC6Q03468 1493 aa14.02□□□□□ -0.16
TARDBP-216ENST00000614494 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
TARDBP-216ENST00000614494 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
TARDBP-216ENST00000614494 LAMC3Q9Y6N6 1575 aa13.9□□□□□ -0.18
TARDBP-216ENST00000614494 MROH2BQ7Z745 1585 aa13.83□□□□□ -0.19
TARDBP-216ENST00000614494 PDS5BQ9NTI5 1447 aa13.82□□□□□ -0.2
TARDBP-216ENST00000614494 NESP48681 1621 aa13.79□□□□□ -0.2
TARDBP-216ENST00000614494 THOC2Q8NI27 1593 aaKnown RBP13.76□□□□□ -0.21
TARDBP-216ENST00000614494 CADPSQ9ULU8 1353 aa13.73□□□□□ -0.21
TARDBP-216ENST00000614494 MRC2Q9UBG0 1479 aa13.67□□□□□ -0.22
TARDBP-216ENST00000614494 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
TARDBP-216ENST00000614494 MSH5O43196 834 aa13.65□□□□□ -0.22
TARDBP-216ENST00000614494 WIZO95785 1651 aa13.64□□□□□ -0.23
TARDBP-216ENST00000614494 WDR62O43379 1518 aa13.63□□□□□ -0.23
TARDBP-216ENST00000614494 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
TARDBP-216ENST00000614494 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
TARDBP-216ENST00000614494 RSF1Q96T23 1441 aaPredicted RBP13.59□□□□□ -0.23
TARDBP-216ENST00000614494 CFTRP13569 1480 aa13.59□□□□□ -0.23
TARDBP-216ENST00000614494 FANCD2Q9BXW9 1451 aa13.56□□□□□ -0.24
TARDBP-216ENST00000614494 PRDM2Q13029 1718 aa13.46□□□□□ -0.25
TARDBP-216ENST00000614494 ABCC8Q09428 1581 aa13.41□□□□□ -0.26
TARDBP-216ENST00000614494 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
TARDBP-216ENST00000614494 IFT140Q96RY7 1462 aa13.37□□□□□ -0.27
TARDBP-216ENST00000614494 CCDC88BA6NC98 1476 aa13.36□□□□□ -0.27
TARDBP-216ENST00000614494 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
TARDBP-216ENST00000614494 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
TARDBP-216ENST00000614494 DNMBPQ6XZF7 1577 aa13.29□□□□□ -0.28
TARDBP-216ENST00000614494 WDR97A6NE52 1622 aa13.23□□□□□ -0.29
TARDBP-216ENST00000614494 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
TARDBP-216ENST00000614494 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
TARDBP-216ENST00000614494 ZNF608Q9ULD9 1512 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-216ENST00000614494 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
TARDBP-216ENST00000614494 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
TARDBP-216ENST00000614494 RIMBP3CA6NJZ7 1639 aa13.11□□□□□ -0.31
TARDBP-216ENST00000614494 RIMBP3BA6NNM3 1639 aa13.11□□□□□ -0.31
TARDBP-216ENST00000614494 RIMBP3Q9UFD9 1639 aa13.11□□□□□ -0.31
TARDBP-216ENST00000614494 ARHGEF11O15085 1522 aa13.11□□□□□ -0.31
TARDBP-216ENST00000614494 SOGA1O94964 1423 aa13.1□□□□□ -0.31
TARDBP-216ENST00000614494 AQRO60306 1485 aaKnown RBP eCLIP13.08□□□□□ -0.32
TARDBP-216ENST00000614494 MAGI1Q96QZ7 1491 aaPredicted RBP13.08□□□□□ -0.32
TARDBP-216ENST00000614494 PIAS4Q8N2W9 510 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-216ENST00000614494 FGD5Q6ZNL6 1462 aa13.06□□□□□ -0.32
TARDBP-216ENST00000614494 CHD1O14646 1710 aa13.05□□□□□ -0.32
TARDBP-216ENST00000614494 GRIN2BQ13224 1484 aa13.04□□□□□ -0.32
TARDBP-216ENST00000614494 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
TARDBP-216ENST00000614494 RAD54L2Q9Y4B4 1467 aa13.02□□□□□ -0.33
TARDBP-216ENST00000614494 CUX1P39880 1505 aa13.02□□□□□ -0.33
TARDBP-216ENST00000614494 TDRD9Q8NDG6 1382 aaKnown RBP13.01□□□□□ -0.33
TARDBP-216ENST00000614494 SNAPC4Q5SXM2 1469 aa13.01□□□□□ -0.33
TARDBP-216ENST00000614494 SYNJ2O15056 1496 aa13□□□□□ -0.33
TARDBP-216ENST00000614494 FBLN2P98095 1184 aa13□□□□□ -0.33
TARDBP-216ENST00000614494 CHMP7Q8WUX9 453 aaPredicted RBP12.98□□□□□ -0.33
TARDBP-216ENST00000614494 ABCA10Q8WWZ4 1543 aa12.98□□□□□ -0.33
TARDBP-216ENST00000614494 CLASP1Q7Z460 1538 aa12.97□□□□□ -0.33
TARDBP-216ENST00000614494 GAPVD1Q14C86 1478 aa12.96□□□□□ -0.34
TARDBP-216ENST00000614494 WRNQ14191 1432 aaPredicted RBP eCLIP12.95□□□□□ -0.34
TARDBP-216ENST00000614494 ARAP1Q96P48 1450 aa12.94□□□□□ -0.34
TARDBP-216ENST00000614494 ABCA5Q8WWZ7 1642 aa12.93□□□□□ -0.34
TARDBP-216ENST00000614494 CYB5RLQ6IPT4 315 aa12.93□□□□□ -0.34
TARDBP-216ENST00000614494 PBRM1Q86U86 1689 aa12.92□□□□□ -0.34
TARDBP-216ENST00000614494 TOP2BQ02880 1626 aa12.89□□□□□ -0.35
TARDBP-216ENST00000614494 BIVM-ERCC5R4GMW8 1640 aa12.88□□□□□ -0.35
TARDBP-216ENST00000614494 SUPT5HO00267 1087 aaKnown RBP12.88□□□□□ -0.35
TARDBP-216ENST00000614494 GRIN2AQ12879 1464 aa12.85□□□□□ -0.35
TARDBP-216ENST00000614494 ERICH3Q5RHP9 1530 aa12.84□□□□□ -0.35
TARDBP-216ENST00000614494 ADAMTS12P58397 1594 aa12.83□□□□□ -0.36
TARDBP-216ENST00000614494 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.36
TARDBP-216ENST00000614494 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms