RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.27□□□□□ -1.411e-41■■■■■ 46.1
TARDBP-216ENST00000614494 DDX6P26196 483 aaKnown RBP eCLIP7.86□□□□□ -1.155e-34■□□□□ 10
TARDBP-216ENST00000614494 GTF2F1P35269 517 aaKnown RBP eCLIP8.1□□□□□ -1.117e-26■■■□□ 18.2
TARDBP-216ENST00000614494 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.51□□□□□ -1.372e-21■■□□□ 12.4
TARDBP-216ENST00000614494 PRPF4O43172 522 aaKnown RBP eCLIP7□□□□□ -1.292e-14■■□□□ 12.4
TARDBP-216ENST00000614494 TARDBPQ13148 414 aaKnown RBP eCLIP7.39□□□□□ -1.231e-13■■■■■ 26.9
TARDBP-216ENST00000614494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.02□□□□□ -0.973e-13■□□□□ 8.3
TARDBP-216ENST00000614494 SRSF1Q07955 248 aaKnown RBP eCLIP7.07□□□□□ -1.283e-13■■□□□ 11.5
TARDBP-216ENST00000614494 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.17□□□□□ -1.263e-13■□□□□ 8.1
TARDBP-216ENST00000614494 ZRANB2O95218 330 aaKnown RBP eCLIP7.08□□□□□ -1.285e-13■□□□□ 10.2
TARDBP-216ENST00000614494 YBX3P16989 372 aaKnown RBP eCLIP9.82□□□□□ -0.848e-13■□□□□ 8.1
TARDBP-216ENST00000614494 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.26□□□□□ -1.099e-12■■■■■ 35.6
TARDBP-216ENST00000614494 GRSF1Q12849 480 aaKnown RBP eCLIP7.81□□□□□ -1.161e-11■■□□□ 12.1
TARDBP-216ENST00000614494 SUB1P53999 127 aaKnown RBP eCLIP5.38□□□□□ -1.551e-11■□□□□ 9.4
TARDBP-216ENST00000614494 UPF1Q92900 1129 aaKnown RBP eCLIP10.68□□□□□ -0.72e-11■■■□□ 15.1
TARDBP-216ENST00000614494 EIF4G2P78344 907 aaKnown RBP eCLIP9.95□□□□□ -0.828e-11■■□□□ 12.1
TARDBP-216ENST00000614494 U2AF2P26368 475 aaKnown RBP eCLIP7.94□□□□□ -1.142e-10■□□□□ 10.5
TARDBP-216ENST00000614494 SRSF7Q16629 238 aaKnown RBP eCLIP5.58□□□□□ -1.522e-10■■■□□ 18.4
TARDBP-216ENST00000614494 FUSP35637 526 aaKnown RBP eCLIP4.77□□□□□ -1.653e-10■■□□□ 12.1
TARDBP-216ENST00000614494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.7□□□□□ -1.181e-9■■■■□ 21.2
TARDBP-216ENST00000614494 KHSRPQ92945 711 aaKnown RBP eCLIP8.13□□□□□ -1.111e-9■□□□□ 11
TARDBP-216ENST00000614494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.15□□□□□ -0.621e-9■■□□□ 12.9
TARDBP-216ENST00000614494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.02□□□□□ -0.811e-9■■■□□ 18
TARDBP-216ENST00000614494 LSM11P83369 360 aaKnown RBP eCLIP7.41□□□□□ -1.223e-9■■□□□ 11.9
TARDBP-216ENST00000614494 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.74□□□□□ -1.335e-8■■■■■ 204.6
TARDBP-216ENST00000614494 RBM22Q9NW64 420 aaKnown RBP eCLIP7.17□□□□□ -1.265e-8■□□□□ 9.1
TARDBP-216ENST00000614494 ZC3H11AO75152 810 aaKnown RBP eCLIP8.09□□□□□ -1.111e-7■■□□□ 12
TARDBP-216ENST00000614494 FXR2P51116 673 aaKnown RBP eCLIP9.56□□□□□ -0.882e-7■■□□□ 11.5
TARDBP-216ENST00000614494 TIA1P31483 386 aaKnown RBP eCLIP6.56□□□□□ -1.362e-7■■■□□ 17.4
TARDBP-216ENST00000614494 U2AF1Q01081 240 aaKnown RBP eCLIP9.61□□□□□ -0.873e-7■■■□□ 15.3
TARDBP-216ENST00000614494 SF3B4Q15427 424 aaKnown RBP eCLIP6.77□□□□□ -1.334e-7■■□□□ 11.4
TARDBP-216ENST00000614494 TIAL1Q01085 375 aaKnown RBP eCLIP6.74□□□□□ -1.336e-7■■□□□ 11.7
TARDBP-216ENST00000614494 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.49□□□□□ -1.051e-6■□□□□ 10.9
TARDBP-216ENST00000614494 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.97□□□□□ -1.295e-6■■■■□ 25.7
TARDBP-216ENST00000614494 CDC40O60508 579 aaKnown RBP eCLIP6.73□□□□□ -1.335e-6■■□□□ 12.3
TARDBP-216ENST00000614494 ILF3Q12906 894 aaKnown RBP eCLIP7.29□□□□□ -1.246e-6■□□□□ 8.6
TARDBP-216ENST00000614494 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.07□□□□□ -1.287e-6■■■■■ 27.5
Retrieved 37 of 37 RNA–protein pairs in 7.1 ms