RNA–Protein interactions for RNA: ENST00000602998.1

SH3YL1-227, Transcript of SH3 and SYLF domain containing 1, humanhuman

Gene SH3YL1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-227ENST00000602998 NISCHQ9Y2I1 1504 aa25.18■■□□□ 1.62
SH3YL1-227ENST00000602998 ABCC9O60706 1549 aa22.97■■□□□ 1.27
SH3YL1-227ENST00000602998 CCDC180Q9P1Z9 1646 aa22.62■■□□□ 1.21
SH3YL1-227ENST00000602998 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
SH3YL1-227ENST00000602998 DNAJC5BQ9UF47 199 aa21.84■■□□□ 1.09
SH3YL1-227ENST00000602998 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
SH3YL1-227ENST00000602998 NACADO15069 1562 aa21.44■■□□□ 1.02
SH3YL1-227ENST00000602998 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
SH3YL1-227ENST00000602998 PABPN1Q86U42 306 aaKnown RBP eCLIP21.39■■□□□ 1.01
SH3YL1-227ENST00000602998 UNC13AQ9UPW8 1703 aa21.29■■□□□ 1
SH3YL1-227ENST00000602998 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
SH3YL1-227ENST00000602998 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.97
SH3YL1-227ENST00000602998 MYO15BQ96JP2 1530 aa21.03■□□□□ 0.96
SH3YL1-227ENST00000602998 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
SH3YL1-227ENST00000602998 SCRIBQ14160 1630 aa20.71■□□□□ 0.91
SH3YL1-227ENST00000602998 DCAF1Q9Y4B6 1507 aa20.71■□□□□ 0.91
SH3YL1-227ENST00000602998 CC2D2AQ9P2K1 1620 aa20.71■□□□□ 0.91
SH3YL1-227ENST00000602998 CECR2Q9BXF3 1484 aa20.66■□□□□ 0.9
SH3YL1-227ENST00000602998 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
SH3YL1-227ENST00000602998 EIF4G1Q04637 1599 aaKnown RBP20.59■□□□□ 0.89
SH3YL1-227ENST00000602998 DNAJC5Q9H3Z4 198 aa20.08■□□□□ 0.81
SH3YL1-227ENST00000602998 NCAPD3P42695 1498 aa19.83■□□□□ 0.76
SH3YL1-227ENST00000602998 ATAD2BQ9ULI0 1458 aa19.78■□□□□ 0.76
SH3YL1-227ENST00000602998 ERCC6Q03468 1493 aa19.76■□□□□ 0.75
SH3YL1-227ENST00000602998 CUX2O14529 1486 aa19.75■□□□□ 0.75
SH3YL1-227ENST00000602998 NESP48681 1621 aa19.71■□□□□ 0.75
SH3YL1-227ENST00000602998 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
SH3YL1-227ENST00000602998 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
SH3YL1-227ENST00000602998 HMGXB3Q12766 1538 aa19.63■□□□□ 0.73
SH3YL1-227ENST00000602998 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
SH3YL1-227ENST00000602998 BAZ1AQ9NRL2 1556 aaPredicted RBP19.51■□□□□ 0.71
SH3YL1-227ENST00000602998 THOC2Q8NI27 1593 aaKnown RBP19.48■□□□□ 0.71
SH3YL1-227ENST00000602998 MROH2BQ7Z745 1585 aa19.46■□□□□ 0.71
SH3YL1-227ENST00000602998 PEG3Q9GZU2 1588 aa19.46■□□□□ 0.71
SH3YL1-227ENST00000602998 KIF21AQ7Z4S6 1674 aa19.4■□□□□ 0.7
SH3YL1-227ENST00000602998 LAMC3Q9Y6N6 1575 aa19.39■□□□□ 0.69
SH3YL1-227ENST00000602998 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
SH3YL1-227ENST00000602998 PDS5BQ9NTI5 1447 aa19.27■□□□□ 0.68
SH3YL1-227ENST00000602998 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
SH3YL1-227ENST00000602998 WIZO95785 1651 aa19.23■□□□□ 0.67
SH3YL1-227ENST00000602998 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
SH3YL1-227ENST00000602998 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
SH3YL1-227ENST00000602998 WDR62O43379 1518 aa19.12■□□□□ 0.65
SH3YL1-227ENST00000602998 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
SH3YL1-227ENST00000602998 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
SH3YL1-227ENST00000602998 CFTRP13569 1480 aa18.97■□□□□ 0.63
SH3YL1-227ENST00000602998 PHF23Q9BUL5 403 aaPredicted RBP18.96■□□□□ 0.63
SH3YL1-227ENST00000602998 RSF1Q96T23 1441 aaPredicted RBP18.95■□□□□ 0.62
SH3YL1-227ENST00000602998 URB2Q14146 1524 aaKnown RBP18.93■□□□□ 0.62
SH3YL1-227ENST00000602998 TOP2AP11388 1531 aaKnown RBP18.89■□□□□ 0.61
SH3YL1-227ENST00000602998 OSCARQ8IYS5 282 aa18.86■□□□□ 0.61
SH3YL1-227ENST00000602998 ZNF608Q9ULD9 1512 aaPredicted RBP18.76■□□□□ 0.59
SH3YL1-227ENST00000602998 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
SH3YL1-227ENST00000602998 CCDC88BA6NC98 1476 aa18.73■□□□□ 0.59
SH3YL1-227ENST00000602998 RIMBP3CA6NJZ7 1639 aa18.7■□□□□ 0.58
SH3YL1-227ENST00000602998 RIMBP3BA6NNM3 1639 aa18.7■□□□□ 0.58
SH3YL1-227ENST00000602998 RIMBP3Q9UFD9 1639 aa18.7■□□□□ 0.58
SH3YL1-227ENST00000602998 TOPBP1Q92547 1522 aa18.65■□□□□ 0.58
SH3YL1-227ENST00000602998 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
SH3YL1-227ENST00000602998 ARHGEF11O15085 1522 aa18.59■□□□□ 0.57
SH3YL1-227ENST00000602998 EIF4G3O43432 1585 aaKnown RBP18.58■□□□□ 0.56
SH3YL1-227ENST00000602998 AQRO60306 1485 aaKnown RBP eCLIP18.55■□□□□ 0.56
SH3YL1-227ENST00000602998 DNMBPQ6XZF7 1577 aa18.53■□□□□ 0.56
SH3YL1-227ENST00000602998 TARBP1Q13395 1621 aaKnown RBP18.52■□□□□ 0.55
SH3YL1-227ENST00000602998 CHD1O14646 1710 aa18.52■□□□□ 0.55
SH3YL1-227ENST00000602998 CYB5RLQ6IPT4 315 aa18.51■□□□□ 0.55
SH3YL1-227ENST00000602998 ABCC8Q09428 1581 aa18.48■□□□□ 0.55
SH3YL1-227ENST00000602998 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.54
SH3YL1-227ENST00000602998 RAD54L2Q9Y4B4 1467 aa18.45■□□□□ 0.54
SH3YL1-227ENST00000602998 FBLN2P98095 1184 aa18.44■□□□□ 0.54
SH3YL1-227ENST00000602998 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
SH3YL1-227ENST00000602998 TDRD9Q8NDG6 1382 aaKnown RBP18.4■□□□□ 0.54
SH3YL1-227ENST00000602998 SOGA1O94964 1423 aa18.34■□□□□ 0.53
SH3YL1-227ENST00000602998 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.52
SH3YL1-227ENST00000602998 SNAPC4Q5SXM2 1469 aa18.31■□□□□ 0.52
SH3YL1-227ENST00000602998 FGD5Q6ZNL6 1462 aa18.31■□□□□ 0.52
SH3YL1-227ENST00000602998 CUX1P39880 1505 aa18.28■□□□□ 0.52
SH3YL1-227ENST00000602998 CLASP1Q7Z460 1538 aa18.26■□□□□ 0.51
SH3YL1-227ENST00000602998 CHMP7Q8WUX9 453 aaPredicted RBP18.22■□□□□ 0.51
SH3YL1-227ENST00000602998 WDR97A6NE52 1622 aa18.18■□□□□ 0.5
SH3YL1-227ENST00000602998 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
SH3YL1-227ENST00000602998 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
SH3YL1-227ENST00000602998 SYNJ1O43426 1573 aa18.17■□□□□ 0.5
SH3YL1-227ENST00000602998 SYNJ2O15056 1496 aa18.14■□□□□ 0.5
SH3YL1-227ENST00000602998 PBRM1Q86U86 1689 aa18.14■□□□□ 0.49
SH3YL1-227ENST00000602998 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
SH3YL1-227ENST00000602998 ABCA5Q8WWZ7 1642 aa18.06■□□□□ 0.48
SH3YL1-227ENST00000602998 ERCC6L2Q5T890 1561 aa18.06■□□□□ 0.48
SH3YL1-227ENST00000602998 ABCA10Q8WWZ4 1543 aa18.06■□□□□ 0.48
SH3YL1-227ENST00000602998 SUPT5HO00267 1087 aaKnown RBP18.01■□□□□ 0.47
SH3YL1-227ENST00000602998 GRIN2AQ12879 1464 aa17.97■□□□□ 0.47
SH3YL1-227ENST00000602998 CEP170Q5SW79 1584 aa17.96■□□□□ 0.47
SH3YL1-227ENST00000602998 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
SH3YL1-227ENST00000602998 NUP160Q12769 1436 aa17.92■□□□□ 0.46
SH3YL1-227ENST00000602998 WRNQ14191 1432 aaPredicted RBP eCLIP17.91■□□□□ 0.46
SH3YL1-227ENST00000602998 FOXD1Q16676 465 aa17.89■□□□□ 0.45
SH3YL1-227ENST00000602998 TOP2BQ02880 1626 aa17.88■□□□□ 0.45
SH3YL1-227ENST00000602998 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
SH3YL1-227ENST00000602998 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
SH3YL1-227ENST00000602998 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms