RNA–Protein interactions for RNA: ENST00000602654.1

AP000962.1-201, humanhuman

TSL 5 BASIC

Gene AP000962.1, Length 729 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000962.1-201ENST00000602654 NISCHQ9Y2I1 1504 aa24.39■■□□□ 1.49
AP000962.1-201ENST00000602654 ABCC9O60706 1549 aa22.62■■□□□ 1.21
AP000962.1-201ENST00000602654 CCDC180Q9P1Z9 1646 aa22.13■■□□□ 1.13
AP000962.1-201ENST00000602654 DNAJC5BQ9UF47 199 aa21.8■■□□□ 1.08
AP000962.1-201ENST00000602654 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
AP000962.1-201ENST00000602654 RB1CC1Q8TDY2 1594 aa21.39■■□□□ 1.01
AP000962.1-201ENST00000602654 NACADO15069 1562 aa21.13■□□□□ 0.97
AP000962.1-201ENST00000602654 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
AP000962.1-201ENST00000602654 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
AP000962.1-201ENST00000602654 DCAF8L2P0C7V8 631 aa20.83■□□□□ 0.93
AP000962.1-201ENST00000602654 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
AP000962.1-201ENST00000602654 MYO15BQ96JP2 1530 aa20.72■□□□□ 0.91
AP000962.1-201ENST00000602654 BICRAQ9NZM4 1560 aa20.69■□□□□ 0.9
AP000962.1-201ENST00000602654 DNAJC5Q9H3Z4 198 aa20.65■□□□□ 0.9
AP000962.1-201ENST00000602654 SHROOM4Q9ULL8 1493 aa20.59■□□□□ 0.89
AP000962.1-201ENST00000602654 CECR2Q9BXF3 1484 aa20.53■□□□□ 0.88
AP000962.1-201ENST00000602654 CC2D2AQ9P2K1 1620 aa20.44■□□□□ 0.86
AP000962.1-201ENST00000602654 EIF4G1Q04637 1599 aaKnown RBP20.26■□□□□ 0.83
AP000962.1-201ENST00000602654 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
AP000962.1-201ENST00000602654 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
AP000962.1-201ENST00000602654 SCRIBQ14160 1630 aa20.08■□□□□ 0.8
AP000962.1-201ENST00000602654 CUX2O14529 1486 aa19.93■□□□□ 0.78
AP000962.1-201ENST00000602654 ERCC6Q03468 1493 aa19.66■□□□□ 0.74
AP000962.1-201ENST00000602654 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
AP000962.1-201ENST00000602654 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
AP000962.1-201ENST00000602654 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
AP000962.1-201ENST00000602654 HMGXB3Q12766 1538 aa19.28■□□□□ 0.68
AP000962.1-201ENST00000602654 SMARCA2P51531 1590 aa19.26■□□□□ 0.67
AP000962.1-201ENST00000602654 NESP48681 1621 aa19.22■□□□□ 0.67
AP000962.1-201ENST00000602654 THOC2Q8NI27 1593 aaKnown RBP19.2■□□□□ 0.66
AP000962.1-201ENST00000602654 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
AP000962.1-201ENST00000602654 PDS5BQ9NTI5 1447 aa19.11■□□□□ 0.65
AP000962.1-201ENST00000602654 SMARCA4P51532 1647 aa19.08■□□□□ 0.65
AP000962.1-201ENST00000602654 BAZ1BQ9UIG0 1483 aaKnown RBP19.06■□□□□ 0.64
AP000962.1-201ENST00000602654 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
AP000962.1-201ENST00000602654 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
AP000962.1-201ENST00000602654 KIF21AQ7Z4S6 1674 aa18.94■□□□□ 0.62
AP000962.1-201ENST00000602654 OSCARQ8IYS5 282 aa18.93■□□□□ 0.62
AP000962.1-201ENST00000602654 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
AP000962.1-201ENST00000602654 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
AP000962.1-201ENST00000602654 WDR62O43379 1518 aa18.86■□□□□ 0.61
AP000962.1-201ENST00000602654 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.6
AP000962.1-201ENST00000602654 CEP164Q9UPV0 1460 aa18.69■□□□□ 0.58
AP000962.1-201ENST00000602654 FANCD2Q9BXW9 1451 aa18.6■□□□□ 0.57
AP000962.1-201ENST00000602654 PHF23Q9BUL5 403 aaPredicted RBP18.6■□□□□ 0.57
AP000962.1-201ENST00000602654 RIMBP3CA6NJZ7 1639 aa18.59■□□□□ 0.57
AP000962.1-201ENST00000602654 RIMBP3BA6NNM3 1639 aa18.59■□□□□ 0.57
AP000962.1-201ENST00000602654 RIMBP3Q9UFD9 1639 aa18.59■□□□□ 0.57
AP000962.1-201ENST00000602654 WIZO95785 1651 aa18.57■□□□□ 0.56
AP000962.1-201ENST00000602654 CFTRP13569 1480 aa18.52■□□□□ 0.55
AP000962.1-201ENST00000602654 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
AP000962.1-201ENST00000602654 URB2Q14146 1524 aaKnown RBP18.44■□□□□ 0.54
AP000962.1-201ENST00000602654 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
AP000962.1-201ENST00000602654 CYB5RLQ6IPT4 315 aa18.43■□□□□ 0.54
AP000962.1-201ENST00000602654 IFT140Q96RY7 1462 aa18.39■□□□□ 0.53
AP000962.1-201ENST00000602654 RSF1Q96T23 1441 aaPredicted RBP18.31■□□□□ 0.52
AP000962.1-201ENST00000602654 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
AP000962.1-201ENST00000602654 TOP2AP11388 1531 aaKnown RBP18.26■□□□□ 0.51
AP000962.1-201ENST00000602654 ARAP1Q96P48 1450 aa18.26■□□□□ 0.51
AP000962.1-201ENST00000602654 ABCC8Q09428 1581 aa18.25■□□□□ 0.51
AP000962.1-201ENST00000602654 SENP3Q9H4L4 574 aaPredicted RBP18.23■□□□□ 0.51
AP000962.1-201ENST00000602654 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
AP000962.1-201ENST00000602654 TOPBP1Q92547 1522 aa18.16■□□□□ 0.5
AP000962.1-201ENST00000602654 EIF4G3O43432 1585 aaKnown RBP18.16■□□□□ 0.5
AP000962.1-201ENST00000602654 CCDC88BA6NC98 1476 aa18.12■□□□□ 0.49
AP000962.1-201ENST00000602654 CHD1O14646 1710 aa18.1■□□□□ 0.49
AP000962.1-201ENST00000602654 FBLN2P98095 1184 aa18.1■□□□□ 0.49
AP000962.1-201ENST00000602654 AQRO60306 1485 aaKnown RBP eCLIP18.07■□□□□ 0.48
AP000962.1-201ENST00000602654 DNMBPQ6XZF7 1577 aa18.05■□□□□ 0.48
AP000962.1-201ENST00000602654 TARBP1Q13395 1621 aaKnown RBP18.04■□□□□ 0.48
AP000962.1-201ENST00000602654 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
AP000962.1-201ENST00000602654 WDR97A6NE52 1622 aa17.95■□□□□ 0.46
AP000962.1-201ENST00000602654 CHMP7Q8WUX9 453 aaPredicted RBP17.95■□□□□ 0.46
AP000962.1-201ENST00000602654 SYNJ1O43426 1573 aa17.95■□□□□ 0.46
AP000962.1-201ENST00000602654 POLA1P09884 1462 aaPredicted RBP17.94■□□□□ 0.46
AP000962.1-201ENST00000602654 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
AP000962.1-201ENST00000602654 RAD54L2Q9Y4B4 1467 aa17.9■□□□□ 0.46
AP000962.1-201ENST00000602654 SOGA1O94964 1423 aa17.89■□□□□ 0.45
AP000962.1-201ENST00000602654 TDRD9Q8NDG6 1382 aaKnown RBP17.88■□□□□ 0.45
AP000962.1-201ENST00000602654 GAPVD1Q14C86 1478 aa17.86■□□□□ 0.45
AP000962.1-201ENST00000602654 SNAPC4Q5SXM2 1469 aa17.86■□□□□ 0.45
AP000962.1-201ENST00000602654 SYNJ2O15056 1496 aa17.83■□□□□ 0.45
AP000962.1-201ENST00000602654 GRIN2BQ13224 1484 aa17.82■□□□□ 0.44
AP000962.1-201ENST00000602654 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
AP000962.1-201ENST00000602654 CUX1P39880 1505 aa17.7■□□□□ 0.42
AP000962.1-201ENST00000602654 ILDR1Q86SU0 546 aaPredicted RBP17.63■□□□□ 0.41
AP000962.1-201ENST00000602654 PBRM1Q86U86 1689 aa17.58■□□□□ 0.4
AP000962.1-201ENST00000602654 ERCC6L2Q5T890 1561 aa17.57■□□□□ 0.4
AP000962.1-201ENST00000602654 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
AP000962.1-201ENST00000602654 KIF13AQ9H1H9 1805 aa17.55■□□□□ 0.4
AP000962.1-201ENST00000602654 NUP160Q12769 1436 aa17.55■□□□□ 0.4
AP000962.1-201ENST00000602654 CEP170Q5SW79 1584 aa17.54■□□□□ 0.4
AP000962.1-201ENST00000602654 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
AP000962.1-201ENST00000602654 KDM4FA0A1W2PPD8 638 aa17.51■□□□□ 0.39
AP000962.1-201ENST00000602654 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
AP000962.1-201ENST00000602654 ABCA5Q8WWZ7 1642 aa17.5■□□□□ 0.39
AP000962.1-201ENST00000602654 ABCC10Q5T3U5 1492 aa17.5■□□□□ 0.39
AP000962.1-201ENST00000602654 NPM1P06748 294 aaKnown RBP eCLIP17.5■□□□□ 0.39
AP000962.1-201ENST00000602654 FAM69CQ0P6D2 419 aa17.5■□□□□ 0.39
AP000962.1-201ENST00000602654 FHAD1B1AJZ9 1412 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms