RNA–Protein interactions for RNA: ENST00000602234.1

CALR3-203, Transcript of calreticulin 3, humanhuman

TSL 3

Gene CALR3, Length 588 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3-203ENST00000602234 NISCHQ9Y2I1 1504 aa27.74■■■□□ 2.03
CALR3-203ENST00000602234 ABCC9O60706 1549 aa24.96■■□□□ 1.59
CALR3-203ENST00000602234 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
CALR3-203ENST00000602234 AEBP2Q6ZN18 517 aaPredicted RBP24.82■■□□□ 1.56
CALR3-203ENST00000602234 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
CALR3-203ENST00000602234 DNAJC5BQ9UF47 199 aa23.64■■□□□ 1.37
CALR3-203ENST00000602234 NACADO15069 1562 aa23.6■■□□□ 1.37
CALR3-203ENST00000602234 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
CALR3-203ENST00000602234 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
CALR3-203ENST00000602234 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
CALR3-203ENST00000602234 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
CALR3-203ENST00000602234 PABPN1Q86U42 306 aaKnown RBP eCLIP23.2■■□□□ 1.3
CALR3-203ENST00000602234 BICRAQ9NZM4 1560 aa23.17■■□□□ 1.3
CALR3-203ENST00000602234 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
CALR3-203ENST00000602234 DCAF1Q9Y4B6 1507 aa22.97■■□□□ 1.27
CALR3-203ENST00000602234 SHROOM4Q9ULL8 1493 aa22.81■■□□□ 1.24
CALR3-203ENST00000602234 SCRIBQ14160 1630 aa22.62■■□□□ 1.21
CALR3-203ENST00000602234 CC2D2AQ9P2K1 1620 aa22.6■■□□□ 1.21
CALR3-203ENST00000602234 EIF4G1Q04637 1599 aaKnown RBP22.53■■□□□ 1.2
CALR3-203ENST00000602234 CECR2Q9BXF3 1484 aa22.52■■□□□ 1.2
CALR3-203ENST00000602234 NCAPD3P42695 1498 aa21.83■■□□□ 1.08
CALR3-203ENST00000602234 DNAJC5Q9H3Z4 198 aa21.74■■□□□ 1.07
CALR3-203ENST00000602234 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
CALR3-203ENST00000602234 SMARCA4P51532 1647 aa21.65■■□□□ 1.06
CALR3-203ENST00000602234 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
CALR3-203ENST00000602234 CUX2O14529 1486 aa21.61■■□□□ 1.05
CALR3-203ENST00000602234 SMARCA2P51531 1590 aa21.61■■□□□ 1.05
CALR3-203ENST00000602234 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.04
CALR3-203ENST00000602234 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
CALR3-203ENST00000602234 ERCC6Q03468 1493 aa21.49■■□□□ 1.03
CALR3-203ENST00000602234 NESP48681 1621 aa21.46■■□□□ 1.03
CALR3-203ENST00000602234 BAZ1BQ9UIG0 1483 aaKnown RBP21.42■■□□□ 1.02
CALR3-203ENST00000602234 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
CALR3-203ENST00000602234 THOC2Q8NI27 1593 aaKnown RBP21.31■■□□□ 1
CALR3-203ENST00000602234 LAMC3Q9Y6N6 1575 aa21.3■■□□□ 1
CALR3-203ENST00000602234 SENP3Q9H4L4 574 aaPredicted RBP21.28■■□□□ 1
CALR3-203ENST00000602234 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
CALR3-203ENST00000602234 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
CALR3-203ENST00000602234 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
CALR3-203ENST00000602234 WIZO95785 1651 aa21.08■□□□□ 0.96
CALR3-203ENST00000602234 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
CALR3-203ENST00000602234 WDR62O43379 1518 aa20.98■□□□□ 0.95
CALR3-203ENST00000602234 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
CALR3-203ENST00000602234 RSF1Q96T23 1441 aaPredicted RBP20.89■□□□□ 0.94
CALR3-203ENST00000602234 CFTRP13569 1480 aa20.88■□□□□ 0.93
CALR3-203ENST00000602234 CEP164Q9UPV0 1460 aa20.84■□□□□ 0.93
CALR3-203ENST00000602234 FANCD2Q9BXW9 1451 aa20.83■□□□□ 0.93
CALR3-203ENST00000602234 TOP2AP11388 1531 aaKnown RBP20.81■□□□□ 0.92
CALR3-203ENST00000602234 URB2Q14146 1524 aaKnown RBP20.72■□□□□ 0.91
CALR3-203ENST00000602234 PRDM2Q13029 1718 aa20.64■□□□□ 0.9
CALR3-203ENST00000602234 CCDC88BA6NC98 1476 aa20.58■□□□□ 0.89
CALR3-203ENST00000602234 TRIM41Q8WV44 630 aa20.57■□□□□ 0.88
CALR3-203ENST00000602234 OSCARQ8IYS5 282 aa20.54■□□□□ 0.88
CALR3-203ENST00000602234 IFT140Q96RY7 1462 aa20.46■□□□□ 0.87
CALR3-203ENST00000602234 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
CALR3-203ENST00000602234 ZNF608Q9ULD9 1512 aaPredicted RBP20.46■□□□□ 0.87
CALR3-203ENST00000602234 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
CALR3-203ENST00000602234 DNMBPQ6XZF7 1577 aa20.36■□□□□ 0.85
CALR3-203ENST00000602234 RIMBP3CA6NJZ7 1639 aa20.34■□□□□ 0.85
CALR3-203ENST00000602234 RIMBP3BA6NNM3 1639 aa20.34■□□□□ 0.85
CALR3-203ENST00000602234 RIMBP3Q9UFD9 1639 aa20.34■□□□□ 0.85
CALR3-203ENST00000602234 TARBP1Q13395 1621 aaKnown RBP20.32■□□□□ 0.84
CALR3-203ENST00000602234 EIF4G3O43432 1585 aaKnown RBP20.32■□□□□ 0.84
CALR3-203ENST00000602234 ARHGEF11O15085 1522 aa20.27■□□□□ 0.83
CALR3-203ENST00000602234 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
CALR3-203ENST00000602234 AQRO60306 1485 aaKnown RBP eCLIP20.24■□□□□ 0.83
CALR3-203ENST00000602234 CHD1O14646 1710 aa20.2■□□□□ 0.82
CALR3-203ENST00000602234 RAD54L2Q9Y4B4 1467 aa20.15■□□□□ 0.82
CALR3-203ENST00000602234 SOGA1O94964 1423 aa20.1■□□□□ 0.81
CALR3-203ENST00000602234 WDR97A6NE52 1622 aa20.09■□□□□ 0.81
CALR3-203ENST00000602234 ARAP1Q96P48 1450 aa20.08■□□□□ 0.81
CALR3-203ENST00000602234 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.8
CALR3-203ENST00000602234 CUX1P39880 1505 aa20.07■□□□□ 0.8
CALR3-203ENST00000602234 FGD5Q6ZNL6 1462 aa20.07■□□□□ 0.8
CALR3-203ENST00000602234 CYB5RLQ6IPT4 315 aa20.04■□□□□ 0.8
CALR3-203ENST00000602234 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.79
CALR3-203ENST00000602234 SNAPC4Q5SXM2 1469 aa20.01■□□□□ 0.79
CALR3-203ENST00000602234 MAGI1Q96QZ7 1491 aaPredicted RBP19.99■□□□□ 0.79
CALR3-203ENST00000602234 FBLN2P98095 1184 aa19.97■□□□□ 0.79
CALR3-203ENST00000602234 GRIN2BQ13224 1484 aa19.95■□□□□ 0.78
CALR3-203ENST00000602234 SYNJ2O15056 1496 aa19.91■□□□□ 0.78
CALR3-203ENST00000602234 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
CALR3-203ENST00000602234 ABCA10Q8WWZ4 1543 aa19.88■□□□□ 0.77
CALR3-203ENST00000602234 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
CALR3-203ENST00000602234 CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
CALR3-203ENST00000602234 ABCA5Q8WWZ7 1642 aa19.87■□□□□ 0.77
CALR3-203ENST00000602234 GAPVD1Q14C86 1478 aa19.86■□□□□ 0.77
CALR3-203ENST00000602234 FOXD1Q16676 465 aa19.84■□□□□ 0.77
CALR3-203ENST00000602234 TRHP20396 242 aaPredicted RBP19.76■□□□□ 0.75
CALR3-203ENST00000602234 BIVM-ERCC5R4GMW8 1640 aa19.73■□□□□ 0.75
CALR3-203ENST00000602234 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
CALR3-203ENST00000602234 WRNQ14191 1432 aaPredicted RBP eCLIP19.71■□□□□ 0.75
CALR3-203ENST00000602234 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
CALR3-203ENST00000602234 NUP160Q12769 1436 aa19.7■□□□□ 0.74
CALR3-203ENST00000602234 ADAMTS12P58397 1594 aa19.7■□□□□ 0.74
CALR3-203ENST00000602234 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
CALR3-203ENST00000602234 ERCC6L2Q5T890 1561 aa19.68■□□□□ 0.74
CALR3-203ENST00000602234 CEP170Q5SW79 1584 aa19.66■□□□□ 0.74
CALR3-203ENST00000602234 SHROOM2Q13796 1616 aa19.64■□□□□ 0.73
CALR3-203ENST00000602234 FHAD1B1AJZ9 1412 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms