RNA–Protein interactions for RNA: ENST00000598758.5

TGFB1-203, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-203ENST00000598758 NISCHQ9Y2I1 1504 aa24.2■■□□□ 1.47
TGFB1-203ENST00000598758 ABCC9O60706 1549 aa22.25■■□□□ 1.15
TGFB1-203ENST00000598758 CCDC180Q9P1Z9 1646 aa21.94■■□□□ 1.1
TGFB1-203ENST00000598758 DNAJC5BQ9UF47 199 aa21.2■□□□□ 0.98
TGFB1-203ENST00000598758 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
TGFB1-203ENST00000598758 NACADO15069 1562 aa20.76■□□□□ 0.91
TGFB1-203ENST00000598758 UNC13AQ9UPW8 1703 aa20.71■□□□□ 0.91
TGFB1-203ENST00000598758 PABPN1Q86U42 306 aaKnown RBP eCLIP20.6■□□□□ 0.89
TGFB1-203ENST00000598758 BICRAQ9NZM4 1560 aa20.5■□□□□ 0.87
TGFB1-203ENST00000598758 DCAF8L2P0C7V8 631 aa20.44■□□□□ 0.86
TGFB1-203ENST00000598758 MYO15BQ96JP2 1530 aa20.33■□□□□ 0.85
TGFB1-203ENST00000598758 CC2D2AQ9P2K1 1620 aa20.12■□□□□ 0.81
TGFB1-203ENST00000598758 SHROOM4Q9ULL8 1493 aa20.06■□□□□ 0.8
TGFB1-203ENST00000598758 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
TGFB1-203ENST00000598758 ZCCHC6Q5VYS8 1495 aaKnown RBP20.01■□□□□ 0.79
TGFB1-203ENST00000598758 EIF4G1Q04637 1599 aaKnown RBP19.97■□□□□ 0.79
TGFB1-203ENST00000598758 SCRIBQ14160 1630 aa19.97■□□□□ 0.79
TGFB1-203ENST00000598758 DCAF1Q9Y4B6 1507 aa19.96■□□□□ 0.79
TGFB1-203ENST00000598758 DNAJC5Q9H3Z4 198 aa19.65■□□□□ 0.74
TGFB1-203ENST00000598758 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
TGFB1-203ENST00000598758 CHIC1Q5VXU3 224 aa19.56■□□□□ 0.72
TGFB1-203ENST00000598758 CUX2O14529 1486 aa19.28■□□□□ 0.68
TGFB1-203ENST00000598758 ERCC6Q03468 1493 aa19.17■□□□□ 0.66
TGFB1-203ENST00000598758 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
TGFB1-203ENST00000598758 ATAD2BQ9ULI0 1458 aa19.06■□□□□ 0.64
TGFB1-203ENST00000598758 NESP48681 1621 aa19.04■□□□□ 0.64
TGFB1-203ENST00000598758 HMGXB3Q12766 1538 aa19.02■□□□□ 0.64
TGFB1-203ENST00000598758 SMARCA4P51532 1647 aa19.01■□□□□ 0.63
TGFB1-203ENST00000598758 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
TGFB1-203ENST00000598758 THOC2Q8NI27 1593 aaKnown RBP18.97■□□□□ 0.63
TGFB1-203ENST00000598758 KIF21AQ7Z4S6 1674 aa18.86■□□□□ 0.61
TGFB1-203ENST00000598758 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
TGFB1-203ENST00000598758 PEG3Q9GZU2 1588 aa18.81■□□□□ 0.6
TGFB1-203ENST00000598758 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
TGFB1-203ENST00000598758 BAZ1AQ9NRL2 1556 aaPredicted RBP18.79■□□□□ 0.6
TGFB1-203ENST00000598758 MROH2BQ7Z745 1585 aa18.68■□□□□ 0.58
TGFB1-203ENST00000598758 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
TGFB1-203ENST00000598758 PDS5BQ9NTI5 1447 aa18.63■□□□□ 0.57
TGFB1-203ENST00000598758 WDR62O43379 1518 aa18.57■□□□□ 0.56
TGFB1-203ENST00000598758 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
TGFB1-203ENST00000598758 CADPSQ9ULU8 1353 aa18.52■□□□□ 0.55
TGFB1-203ENST00000598758 WIZO95785 1651 aa18.47■□□□□ 0.55
TGFB1-203ENST00000598758 CEP164Q9UPV0 1460 aa18.4■□□□□ 0.54
TGFB1-203ENST00000598758 FANCD2Q9BXW9 1451 aa18.35■□□□□ 0.53
TGFB1-203ENST00000598758 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
TGFB1-203ENST00000598758 CFTRP13569 1480 aa18.27■□□□□ 0.52
TGFB1-203ENST00000598758 OSCARQ8IYS5 282 aa18.25■□□□□ 0.51
TGFB1-203ENST00000598758 RIMBP3CA6NJZ7 1639 aa18.24■□□□□ 0.51
TGFB1-203ENST00000598758 RIMBP3BA6NNM3 1639 aa18.24■□□□□ 0.51
TGFB1-203ENST00000598758 RIMBP3Q9UFD9 1639 aa18.24■□□□□ 0.51
TGFB1-203ENST00000598758 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
TGFB1-203ENST00000598758 TOP2AP11388 1531 aaKnown RBP18.17■□□□□ 0.5
TGFB1-203ENST00000598758 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
TGFB1-203ENST00000598758 ZNF608Q9ULD9 1512 aaPredicted RBP18.11■□□□□ 0.49
TGFB1-203ENST00000598758 ARHGEF11O15085 1522 aa18.1■□□□□ 0.49
TGFB1-203ENST00000598758 IFT140Q96RY7 1462 aa18.03■□□□□ 0.48
TGFB1-203ENST00000598758 EIF4G3O43432 1585 aaKnown RBP18.03■□□□□ 0.48
TGFB1-203ENST00000598758 CHD1O14646 1710 aa18.01■□□□□ 0.47
TGFB1-203ENST00000598758 TOPBP1Q92547 1522 aa17.99■□□□□ 0.47
TGFB1-203ENST00000598758 CCDC88BA6NC98 1476 aa17.94■□□□□ 0.46
TGFB1-203ENST00000598758 TARBP1Q13395 1621 aaKnown RBP17.91■□□□□ 0.46
TGFB1-203ENST00000598758 ARAP1Q96P48 1450 aa17.91■□□□□ 0.46
TGFB1-203ENST00000598758 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
TGFB1-203ENST00000598758 CYB5RLQ6IPT4 315 aa17.88■□□□□ 0.45
TGFB1-203ENST00000598758 AQRO60306 1485 aaKnown RBP eCLIP17.86■□□□□ 0.452e-7■■■□□ 17.8
TGFB1-203ENST00000598758 ABCC8Q09428 1581 aa17.83■□□□□ 0.45
TGFB1-203ENST00000598758 POLA1P09884 1462 aaPredicted RBP17.79■□□□□ 0.44
TGFB1-203ENST00000598758 TRHP20396 242 aaPredicted RBP17.77■□□□□ 0.44
TGFB1-203ENST00000598758 CLASP1Q7Z460 1538 aa17.73■□□□□ 0.43
TGFB1-203ENST00000598758 RAD54L2Q9Y4B4 1467 aa17.73■□□□□ 0.43
TGFB1-203ENST00000598758 FBLN2P98095 1184 aa17.72■□□□□ 0.43
TGFB1-203ENST00000598758 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
TGFB1-203ENST00000598758 TDRD9Q8NDG6 1382 aaKnown RBP17.66■□□□□ 0.42
TGFB1-203ENST00000598758 WDR97A6NE52 1622 aa17.64■□□□□ 0.41
TGFB1-203ENST00000598758 SYNJ1O43426 1573 aa17.63■□□□□ 0.41
TGFB1-203ENST00000598758 SOGA1O94964 1423 aa17.63■□□□□ 0.41
TGFB1-203ENST00000598758 FGD5Q6ZNL6 1462 aa17.62■□□□□ 0.41
TGFB1-203ENST00000598758 CUX1P39880 1505 aa17.58■□□□□ 0.41
TGFB1-203ENST00000598758 MAGI1Q96QZ7 1491 aaPredicted RBP17.58■□□□□ 0.41
TGFB1-203ENST00000598758 PBRM1Q86U86 1689 aa17.58■□□□□ 0.4
TGFB1-203ENST00000598758 GRIN2BQ13224 1484 aa17.54■□□□□ 0.4
TGFB1-203ENST00000598758 SYNJ2O15056 1496 aa17.53■□□□□ 0.4
TGFB1-203ENST00000598758 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
TGFB1-203ENST00000598758 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
TGFB1-203ENST00000598758 ERCC6L2Q5T890 1561 aa17.47■□□□□ 0.39
TGFB1-203ENST00000598758 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
TGFB1-203ENST00000598758 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
TGFB1-203ENST00000598758 KIF13AQ9H1H9 1805 aa17.37■□□□□ 0.37
TGFB1-203ENST00000598758 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
TGFB1-203ENST00000598758 CEP170Q5SW79 1584 aa17.36■□□□□ 0.37
TGFB1-203ENST00000598758 GRIN2AQ12879 1464 aa17.34■□□□□ 0.37
TGFB1-203ENST00000598758 SHROOM2Q13796 1616 aa17.34■□□□□ 0.37
TGFB1-203ENST00000598758 NUP160Q12769 1436 aa17.3■□□□□ 0.36
TGFB1-203ENST00000598758 BIVM-ERCC5R4GMW8 1640 aa17.22■□□□□ 0.35
TGFB1-203ENST00000598758 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
TGFB1-203ENST00000598758 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
TGFB1-203ENST00000598758 FHAD1B1AJZ9 1412 aa17.18■□□□□ 0.34
TGFB1-203ENST00000598758 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.345e-6■■■■■ 29.2
TGFB1-203ENST00000598758 ERICH3Q5RHP9 1530 aa17.15■□□□□ 0.34
TGFB1-203ENST00000598758 PRG4Q92954 1404 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms