RNA–Protein interactions for RNA: ENST00000595936.1

LRMDA-211, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-211ENST00000595936 NISCHQ9Y2I1 1504 aa29.6■■■□□ 2.33
LRMDA-211ENST00000595936 ABCC9O60706 1549 aa26.95■■□□□ 1.9
LRMDA-211ENST00000595936 CCDC180Q9P1Z9 1646 aa26.7■■□□□ 1.86
LRMDA-211ENST00000595936 AEBP2Q6ZN18 517 aaPredicted RBP26.09■■□□□ 1.77
LRMDA-211ENST00000595936 RB1CC1Q8TDY2 1594 aa25.59■■□□□ 1.69
LRMDA-211ENST00000595936 DNAJC5BQ9UF47 199 aa25.52■■□□□ 1.68
LRMDA-211ENST00000595936 NACADO15069 1562 aa25.36■■□□□ 1.65
LRMDA-211ENST00000595936 DCAF8L2P0C7V8 631 aa25.08■■□□□ 1.61
LRMDA-211ENST00000595936 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
LRMDA-211ENST00000595936 PABPN1Q86U42 306 aaKnown RBP eCLIP25.03■■□□□ 1.6
LRMDA-211ENST00000595936 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
LRMDA-211ENST00000595936 UNC13AQ9UPW8 1703 aa24.85■■□□□ 1.57
LRMDA-211ENST00000595936 BICRAQ9NZM4 1560 aa24.77■■□□□ 1.56
LRMDA-211ENST00000595936 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
LRMDA-211ENST00000595936 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
LRMDA-211ENST00000595936 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
LRMDA-211ENST00000595936 CECR2Q9BXF3 1484 aa24.36■■□□□ 1.49
LRMDA-211ENST00000595936 CC2D2AQ9P2K1 1620 aa24.33■■□□□ 1.49
LRMDA-211ENST00000595936 EIF4G1Q04637 1599 aaKnown RBP24.23■■□□□ 1.47
LRMDA-211ENST00000595936 SCRIBQ14160 1630 aa24.22■■□□□ 1.47
LRMDA-211ENST00000595936 DNAJC5Q9H3Z4 198 aa23.78■■□□□ 1.4
LRMDA-211ENST00000595936 CUX2O14529 1486 aa23.46■■□□□ 1.35
LRMDA-211ENST00000595936 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
LRMDA-211ENST00000595936 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
LRMDA-211ENST00000595936 ATAD2BQ9ULI0 1458 aa23.27■■□□□ 1.32
LRMDA-211ENST00000595936 SMARCA2P51531 1590 aa23.23■■□□□ 1.31
LRMDA-211ENST00000595936 HMGXB3Q12766 1538 aa23.2■■□□□ 1.3
LRMDA-211ENST00000595936 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
LRMDA-211ENST00000595936 NESP48681 1621 aa23.03■■□□□ 1.28
LRMDA-211ENST00000595936 BAZ1BQ9UIG0 1483 aaKnown RBP23.03■■□□□ 1.28
LRMDA-211ENST00000595936 BAZ1AQ9NRL2 1556 aaPredicted RBP23.02■■□□□ 1.28
LRMDA-211ENST00000595936 PEG3Q9GZU2 1588 aa22.97■■□□□ 1.27
LRMDA-211ENST00000595936 LAMC3Q9Y6N6 1575 aa22.93■■□□□ 1.26
LRMDA-211ENST00000595936 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.26
LRMDA-211ENST00000595936 PDS5BQ9NTI5 1447 aa22.84■■□□□ 1.25
LRMDA-211ENST00000595936 MROH2BQ7Z745 1585 aa22.75■■□□□ 1.23
LRMDA-211ENST00000595936 KIF21AQ7Z4S6 1674 aa22.7■■□□□ 1.22
LRMDA-211ENST00000595936 CADPSQ9ULU8 1353 aa22.69■■□□□ 1.22
LRMDA-211ENST00000595936 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
LRMDA-211ENST00000595936 WDR62O43379 1518 aa22.57■■□□□ 1.2
LRMDA-211ENST00000595936 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
LRMDA-211ENST00000595936 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
LRMDA-211ENST00000595936 CEP164Q9UPV0 1460 aa22.47■■□□□ 1.19
LRMDA-211ENST00000595936 WIZO95785 1651 aa22.42■■□□□ 1.18
LRMDA-211ENST00000595936 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
LRMDA-211ENST00000595936 CFTRP13569 1480 aa22.36■■□□□ 1.17
LRMDA-211ENST00000595936 OSCARQ8IYS5 282 aa22.33■■□□□ 1.17
LRMDA-211ENST00000595936 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
LRMDA-211ENST00000595936 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
LRMDA-211ENST00000595936 URB2Q14146 1524 aaKnown RBP22.19■■□□□ 1.14
LRMDA-211ENST00000595936 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
LRMDA-211ENST00000595936 IFT140Q96RY7 1462 aa22.05■■□□□ 1.12
LRMDA-211ENST00000595936 PRDM2Q13029 1718 aa22.01■■□□□ 1.11
LRMDA-211ENST00000595936 RIMBP3CA6NJZ7 1639 aa21.97■■□□□ 1.11
LRMDA-211ENST00000595936 RIMBP3BA6NNM3 1639 aa21.97■■□□□ 1.11
LRMDA-211ENST00000595936 RIMBP3Q9UFD9 1639 aa21.97■■□□□ 1.11
LRMDA-211ENST00000595936 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
LRMDA-211ENST00000595936 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
LRMDA-211ENST00000595936 CCDC88BA6NC98 1476 aa21.93■■□□□ 1.1
LRMDA-211ENST00000595936 TOPBP1Q92547 1522 aa21.93■■□□□ 1.1
LRMDA-211ENST00000595936 ARHGEF11O15085 1522 aa21.92■■□□□ 1.1
LRMDA-211ENST00000595936 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
LRMDA-211ENST00000595936 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
LRMDA-211ENST00000595936 CYB5RLQ6IPT4 315 aa21.78■■□□□ 1.08
LRMDA-211ENST00000595936 AQRO60306 1485 aaKnown RBP eCLIP21.73■■□□□ 1.07
LRMDA-211ENST00000595936 TARBP1Q13395 1621 aaKnown RBP21.73■■□□□ 1.07
LRMDA-211ENST00000595936 POLA1P09884 1462 aaPredicted RBP21.69■■□□□ 1.06
LRMDA-211ENST00000595936 FBLN2P98095 1184 aa21.68■■□□□ 1.06
LRMDA-211ENST00000595936 CHD1O14646 1710 aa21.67■■□□□ 1.06
LRMDA-211ENST00000595936 ARAP1Q96P48 1450 aa21.66■■□□□ 1.06
LRMDA-211ENST00000595936 TRHP20396 242 aaPredicted RBP21.65■■□□□ 1.06
LRMDA-211ENST00000595936 WDR97A6NE52 1622 aa21.6■■□□□ 1.05
LRMDA-211ENST00000595936 SOGA1O94964 1423 aa21.6■■□□□ 1.05
LRMDA-211ENST00000595936 RAD54L2Q9Y4B4 1467 aa21.57■■□□□ 1.04
LRMDA-211ENST00000595936 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
LRMDA-211ENST00000595936 CHMP7Q8WUX9 453 aaPredicted RBP21.52■■□□□ 1.04
LRMDA-211ENST00000595936 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.03
LRMDA-211ENST00000595936 MAGI1Q96QZ7 1491 aaPredicted RBP21.52■■□□□ 1.03
LRMDA-211ENST00000595936 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
LRMDA-211ENST00000595936 SYNJ1O43426 1573 aa21.49■■□□□ 1.03
LRMDA-211ENST00000595936 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
LRMDA-211ENST00000595936 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
LRMDA-211ENST00000595936 SYNJ2O15056 1496 aa21.44■■□□□ 1.02
LRMDA-211ENST00000595936 CUX1P39880 1505 aa21.39■■□□□ 1.02
LRMDA-211ENST00000595936 GAPVD1Q14C86 1478 aa21.33■■□□□ 1.01
LRMDA-211ENST00000595936 ABCA10Q8WWZ4 1543 aa21.27■■□□□ 1
LRMDA-211ENST00000595936 PBRM1Q86U86 1689 aa21.25■□□□□ 0.99
LRMDA-211ENST00000595936 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
LRMDA-211ENST00000595936 GRIN2AQ12879 1464 aa21.17■□□□□ 0.98
LRMDA-211ENST00000595936 WRNQ14191 1432 aaPredicted RBP eCLIP21.15■□□□□ 0.98
LRMDA-211ENST00000595936 NUP160Q12769 1436 aa21.12■□□□□ 0.97
LRMDA-211ENST00000595936 ADAMTS12P58397 1594 aa21.08■□□□□ 0.97
LRMDA-211ENST00000595936 CEP170Q5SW79 1584 aa21.07■□□□□ 0.96
LRMDA-211ENST00000595936 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
LRMDA-211ENST00000595936 ERCC6L2Q5T890 1561 aa21.05■□□□□ 0.96
LRMDA-211ENST00000595936 SHROOM2Q13796 1616 aa21.03■□□□□ 0.96
LRMDA-211ENST00000595936 ERICH3Q5RHP9 1530 aa21.01■□□□□ 0.95
LRMDA-211ENST00000595936 TOP2BQ02880 1626 aa21■□□□□ 0.95
LRMDA-211ENST00000595936 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
LRMDA-211ENST00000595936 SUPT5HO00267 1087 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms