RNA–Protein interactions for RNA: ENST00000591559.5

CNTD1-206, Transcript of cyclin N-terminal domain containing 1, humanhuman

TSL 4

Gene CNTD1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-206ENST00000591559 NISCHQ9Y2I1 1504 aa19.06■□□□□ 0.64
CNTD1-206ENST00000591559 ABCC9O60706 1549 aa17.2■□□□□ 0.34
CNTD1-206ENST00000591559 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
CNTD1-206ENST00000591559 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
CNTD1-206ENST00000591559 RB1CC1Q8TDY2 1594 aa16.32■□□□□ 0.2
CNTD1-206ENST00000591559 NACADO15069 1562 aa16.21■□□□□ 0.18
CNTD1-206ENST00000591559 UNC13AQ9UPW8 1703 aa16.07■□□□□ 0.16
CNTD1-206ENST00000591559 DCAF8L2P0C7V8 631 aa16.01■□□□□ 0.15
CNTD1-206ENST00000591559 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
CNTD1-206ENST00000591559 MYO15BQ96JP2 1530 aa15.99■□□□□ 0.15
CNTD1-206ENST00000591559 BICRAQ9NZM4 1560 aa15.95■□□□□ 0.14
CNTD1-206ENST00000591559 ZCCHC6Q5VYS8 1495 aaKnown RBP15.81■□□□□ 0.12
CNTD1-206ENST00000591559 DCAF1Q9Y4B6 1507 aa15.8■□□□□ 0.12
CNTD1-206ENST00000591559 AEBP2Q6ZN18 517 aaPredicted RBP15.77■□□□□ 0.12
CNTD1-206ENST00000591559 SHROOM4Q9ULL8 1493 aa15.63■□□□□ 0.09
CNTD1-206ENST00000591559 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
CNTD1-206ENST00000591559 SCRIBQ14160 1630 aa15.56■□□□□ 0.08
CNTD1-206ENST00000591559 CHIC1Q5VXU3 224 aa15.55■□□□□ 0.08
CNTD1-206ENST00000591559 CECR2Q9BXF3 1484 aa15.51■□□□□ 0.07
CNTD1-206ENST00000591559 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
CNTD1-206ENST00000591559 DNAJC5Q9H3Z4 198 aa15.03■□□□□ -0
CNTD1-206ENST00000591559 NCAPD3P42695 1498 aa14.99□□□□□ -0.01
CNTD1-206ENST00000591559 ATAD2BQ9ULI0 1458 aa14.92□□□□□ -0.02
CNTD1-206ENST00000591559 SMARCA4P51532 1647 aa14.87□□□□□ -0.03
CNTD1-206ENST00000591559 CUX2O14529 1486 aa14.87□□□□□ -0.03
CNTD1-206ENST00000591559 HMGXB3Q12766 1538 aa14.84□□□□□ -0.03
CNTD1-206ENST00000591559 SMARCA2P51531 1590 aa14.83□□□□□ -0.04
CNTD1-206ENST00000591559 NESP48681 1621 aa14.79□□□□□ -0.04
CNTD1-206ENST00000591559 ERCC6Q03468 1493 aa14.79□□□□□ -0.04
CNTD1-206ENST00000591559 PEG3Q9GZU2 1588 aa14.76□□□□□ -0.05
CNTD1-206ENST00000591559 BAZ1AQ9NRL2 1556 aaPredicted RBP14.75□□□□□ -0.05
CNTD1-206ENST00000591559 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.05
CNTD1-206ENST00000591559 MROH2BQ7Z745 1585 aa14.68□□□□□ -0.06
CNTD1-206ENST00000591559 THOC2Q8NI27 1593 aaKnown RBP14.66□□□□□ -0.06
CNTD1-206ENST00000591559 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
CNTD1-206ENST00000591559 KIF21AQ7Z4S6 1674 aa14.6□□□□□ -0.07
CNTD1-206ENST00000591559 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
CNTD1-206ENST00000591559 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
CNTD1-206ENST00000591559 WIZO95785 1651 aa14.5□□□□□ -0.09
CNTD1-206ENST00000591559 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
CNTD1-206ENST00000591559 WDR62O43379 1518 aa14.42□□□□□ -0.1
CNTD1-206ENST00000591559 MRC2Q9UBG0 1479 aa14.42□□□□□ -0.1
CNTD1-206ENST00000591559 CFTRP13569 1480 aa14.33□□□□□ -0.12
CNTD1-206ENST00000591559 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
CNTD1-206ENST00000591559 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
CNTD1-206ENST00000591559 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
CNTD1-206ENST00000591559 URB2Q14146 1524 aaKnown RBP14.25□□□□□ -0.13
CNTD1-206ENST00000591559 TRIM41Q8WV44 630 aa14.23□□□□□ -0.13
CNTD1-206ENST00000591559 PRDM2Q13029 1718 aa14.19□□□□□ -0.14
CNTD1-206ENST00000591559 CCDC88BA6NC98 1476 aa14.17□□□□□ -0.14
CNTD1-206ENST00000591559 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
CNTD1-206ENST00000591559 ZNF608Q9ULD9 1512 aaPredicted RBP14.09□□□□□ -0.15
CNTD1-206ENST00000591559 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
CNTD1-206ENST00000591559 TOPBP1Q92547 1522 aa14.05□□□□□ -0.16
CNTD1-206ENST00000591559 RIMBP3CA6NJZ7 1639 aa14.03□□□□□ -0.16
CNTD1-206ENST00000591559 RIMBP3BA6NNM3 1639 aa14.03□□□□□ -0.16
CNTD1-206ENST00000591559 RIMBP3Q9UFD9 1639 aa14.03□□□□□ -0.16
CNTD1-206ENST00000591559 ABCC8Q09428 1581 aa13.98□□□□□ -0.17
CNTD1-206ENST00000591559 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
CNTD1-206ENST00000591559 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
CNTD1-206ENST00000591559 EIF4G3O43432 1585 aaKnown RBP13.97□□□□□ -0.17
CNTD1-206ENST00000591559 ARHGEF11O15085 1522 aa13.95□□□□□ -0.18
CNTD1-206ENST00000591559 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.18
CNTD1-206ENST00000591559 CHD1O14646 1710 aa13.93□□□□□ -0.18
CNTD1-206ENST00000591559 POLA1P09884 1462 aaPredicted RBP13.91□□□□□ -0.18
CNTD1-206ENST00000591559 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
CNTD1-206ENST00000591559 CYB5RLQ6IPT4 315 aa13.83□□□□□ -0.2
CNTD1-206ENST00000591559 ARAP1Q96P48 1450 aa13.82□□□□□ -0.2
CNTD1-206ENST00000591559 SOGA1O94964 1423 aa13.81□□□□□ -0.2
CNTD1-206ENST00000591559 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
CNTD1-206ENST00000591559 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
CNTD1-206ENST00000591559 CUX1P39880 1505 aa13.79□□□□□ -0.2
CNTD1-206ENST00000591559 WDR97A6NE52 1622 aa13.78□□□□□ -0.2
CNTD1-206ENST00000591559 FBLN2P98095 1184 aa13.77□□□□□ -0.21
CNTD1-206ENST00000591559 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.21
CNTD1-206ENST00000591559 CLASP1Q7Z460 1538 aa13.76□□□□□ -0.21
CNTD1-206ENST00000591559 SNAPC4Q5SXM2 1469 aa13.75□□□□□ -0.21
CNTD1-206ENST00000591559 MAGI1Q96QZ7 1491 aaPredicted RBP13.72□□□□□ -0.21
CNTD1-206ENST00000591559 GRIN2BQ13224 1484 aa13.7□□□□□ -0.22
CNTD1-206ENST00000591559 SUPT5HO00267 1087 aaKnown RBP13.69□□□□□ -0.22
CNTD1-206ENST00000591559 SYNJ1O43426 1573 aa13.68□□□□□ -0.22
CNTD1-206ENST00000591559 CHMP7Q8WUX9 453 aaPredicted RBP13.68□□□□□ -0.22
CNTD1-206ENST00000591559 PBRM1Q86U86 1689 aa13.68□□□□□ -0.22
CNTD1-206ENST00000591559 SYNJ2O15056 1496 aa13.67□□□□□ -0.22
CNTD1-206ENST00000591559 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.22
CNTD1-206ENST00000591559 GAPVD1Q14C86 1478 aa13.65□□□□□ -0.22
CNTD1-206ENST00000591559 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
CNTD1-206ENST00000591559 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
CNTD1-206ENST00000591559 ERCC6L2Q5T890 1561 aa13.56□□□□□ -0.24
CNTD1-206ENST00000591559 TOP2BQ02880 1626 aa13.56□□□□□ -0.24
CNTD1-206ENST00000591559 BIVM-ERCC5R4GMW8 1640 aa13.55□□□□□ -0.24
CNTD1-206ENST00000591559 WRNQ14191 1432 aaPredicted RBP eCLIP13.55□□□□□ -0.24
CNTD1-206ENST00000591559 GRIN2AQ12879 1464 aa13.54□□□□□ -0.24
CNTD1-206ENST00000591559 NUP160Q12769 1436 aa13.53□□□□□ -0.24
CNTD1-206ENST00000591559 CEP170Q5SW79 1584 aa13.53□□□□□ -0.24
CNTD1-206ENST00000591559 ADAMTS12P58397 1594 aa13.52□□□□□ -0.25
CNTD1-206ENST00000591559 SHROOM2Q13796 1616 aa13.5□□□□□ -0.25
CNTD1-206ENST00000591559 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
CNTD1-206ENST00000591559 ERICH3Q5RHP9 1530 aa13.45□□□□□ -0.26
CNTD1-206ENST00000591559 KIF13AQ9H1H9 1805 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms