RNA–Protein interactions for RNA: ENST00000591116.5

LINC01535-204, Transcript of long intergenic non-protein coding RNA 1535, humanhuman

TSL 3 BASIC

Gene LINC01535, Length 815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01535-204ENST00000591116 NISCHQ9Y2I1 1504 aa27.84■■■□□ 2.05
LINC01535-204ENST00000591116 ABCC9O60706 1549 aa25.3■■□□□ 1.64
LINC01535-204ENST00000591116 CCDC180Q9P1Z9 1646 aa25.09■■□□□ 1.61
LINC01535-204ENST00000591116 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
LINC01535-204ENST00000591116 DNAJC5BQ9UF47 199 aa23.84■■□□□ 1.41
LINC01535-204ENST00000591116 AEBP2Q6ZN18 517 aaPredicted RBP23.8■■□□□ 1.4
LINC01535-204ENST00000591116 NACADO15069 1562 aa23.75■■□□□ 1.39
LINC01535-204ENST00000591116 DCAF8L2P0C7V8 631 aa23.62■■□□□ 1.37
LINC01535-204ENST00000591116 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
LINC01535-204ENST00000591116 UNC13AQ9UPW8 1703 aa23.45■■□□□ 1.34
LINC01535-204ENST00000591116 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.32
LINC01535-204ENST00000591116 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
LINC01535-204ENST00000591116 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
LINC01535-204ENST00000591116 DCAF1Q9Y4B6 1507 aa22.97■■□□□ 1.27
LINC01535-204ENST00000591116 SHROOM4Q9ULL8 1493 aa22.93■■□□□ 1.26
LINC01535-204ENST00000591116 SCRIBQ14160 1630 aa22.89■■□□□ 1.25
LINC01535-204ENST00000591116 CC2D2AQ9P2K1 1620 aa22.83■■□□□ 1.25
LINC01535-204ENST00000591116 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
LINC01535-204ENST00000591116 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
LINC01535-204ENST00000591116 EIF4G1Q04637 1599 aaKnown RBP22.74■■□□□ 1.23
LINC01535-204ENST00000591116 DNAJC5Q9H3Z4 198 aa22.04■■□□□ 1.12
LINC01535-204ENST00000591116 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
LINC01535-204ENST00000591116 ERCC6Q03468 1493 aa21.87■■□□□ 1.09
LINC01535-204ENST00000591116 CUX2O14529 1486 aa21.86■■□□□ 1.09
LINC01535-204ENST00000591116 ATAD2BQ9ULI0 1458 aa21.83■■□□□ 1.09
LINC01535-204ENST00000591116 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
LINC01535-204ENST00000591116 SMARCA2P51531 1590 aa21.77■■□□□ 1.08
LINC01535-204ENST00000591116 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
LINC01535-204ENST00000591116 NESP48681 1621 aa21.67■■□□□ 1.06
LINC01535-204ENST00000591116 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
LINC01535-204ENST00000591116 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.05
LINC01535-204ENST00000591116 PEG3Q9GZU2 1588 aa21.54■■□□□ 1.04
LINC01535-204ENST00000591116 THOC2Q8NI27 1593 aaKnown RBP21.5■■□□□ 1.03
LINC01535-204ENST00000591116 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
LINC01535-204ENST00000591116 MROH2BQ7Z745 1585 aa21.46■■□□□ 1.03
LINC01535-204ENST00000591116 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
LINC01535-204ENST00000591116 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
LINC01535-204ENST00000591116 CADPSQ9ULU8 1353 aa21.24■□□□□ 0.99
LINC01535-204ENST00000591116 WIZO95785 1651 aa21.21■□□□□ 0.99
LINC01535-204ENST00000591116 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
LINC01535-204ENST00000591116 WDR62O43379 1518 aa21.14■□□□□ 0.98
LINC01535-204ENST00000591116 CEP164Q9UPV0 1460 aa21.08■□□□□ 0.97
LINC01535-204ENST00000591116 TRIM41Q8WV44 630 aa21.06■□□□□ 0.96
LINC01535-204ENST00000591116 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
LINC01535-204ENST00000591116 CFTRP13569 1480 aa20.96■□□□□ 0.95
LINC01535-204ENST00000591116 RSF1Q96T23 1441 aaPredicted RBP20.93■□□□□ 0.94
LINC01535-204ENST00000591116 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
LINC01535-204ENST00000591116 URB2Q14146 1524 aaKnown RBP20.87■□□□□ 0.93
LINC01535-204ENST00000591116 OSCARQ8IYS5 282 aa20.81■□□□□ 0.92
LINC01535-204ENST00000591116 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
LINC01535-204ENST00000591116 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
LINC01535-204ENST00000591116 IFT140Q96RY7 1462 aa20.65■□□□□ 0.9
LINC01535-204ENST00000591116 ZNF608Q9ULD9 1512 aaPredicted RBP20.64■□□□□ 0.9
LINC01535-204ENST00000591116 RIMBP3CA6NJZ7 1639 aa20.61■□□□□ 0.89
LINC01535-204ENST00000591116 RIMBP3BA6NNM3 1639 aa20.61■□□□□ 0.89
LINC01535-204ENST00000591116 RIMBP3Q9UFD9 1639 aa20.61■□□□□ 0.89
LINC01535-204ENST00000591116 TOPBP1Q92547 1522 aa20.61■□□□□ 0.89
LINC01535-204ENST00000591116 EIF4G3O43432 1585 aaKnown RBP20.55■□□□□ 0.88
LINC01535-204ENST00000591116 ABCC8Q09428 1581 aa20.53■□□□□ 0.88
LINC01535-204ENST00000591116 DNMBPQ6XZF7 1577 aa20.52■□□□□ 0.88
LINC01535-204ENST00000591116 ARHGEF11O15085 1522 aa20.52■□□□□ 0.87
LINC01535-204ENST00000591116 CHD1O14646 1710 aa20.44■□□□□ 0.86
LINC01535-204ENST00000591116 TARBP1Q13395 1621 aaKnown RBP20.43■□□□□ 0.86
LINC01535-204ENST00000591116 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.86
LINC01535-204ENST00000591116 POLA1P09884 1462 aaPredicted RBP20.38■□□□□ 0.85
LINC01535-204ENST00000591116 CYB5RLQ6IPT4 315 aa20.36■□□□□ 0.85
LINC01535-204ENST00000591116 FBLN2P98095 1184 aa20.35■□□□□ 0.85
LINC01535-204ENST00000591116 RAD54L2Q9Y4B4 1467 aa20.32■□□□□ 0.84
LINC01535-204ENST00000591116 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
LINC01535-204ENST00000591116 SOGA1O94964 1423 aa20.27■□□□□ 0.84
LINC01535-204ENST00000591116 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.84
LINC01535-204ENST00000591116 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
LINC01535-204ENST00000591116 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
LINC01535-204ENST00000591116 TRHP20396 242 aaPredicted RBP20.22■□□□□ 0.83
LINC01535-204ENST00000591116 WDR97A6NE52 1622 aa20.21■□□□□ 0.83
LINC01535-204ENST00000591116 CUX1P39880 1505 aa20.17■□□□□ 0.82
LINC01535-204ENST00000591116 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
LINC01535-204ENST00000591116 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
LINC01535-204ENST00000591116 CHMP7Q8WUX9 453 aaPredicted RBP20.15■□□□□ 0.82
LINC01535-204ENST00000591116 MAGI1Q96QZ7 1491 aaPredicted RBP20.15■□□□□ 0.82
LINC01535-204ENST00000591116 GRIN2BQ13224 1484 aa20.13■□□□□ 0.81
LINC01535-204ENST00000591116 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
LINC01535-204ENST00000591116 SYNJ2O15056 1496 aa20.09■□□□□ 0.81
LINC01535-204ENST00000591116 PBRM1Q86U86 1689 aa20.08■□□□□ 0.81
LINC01535-204ENST00000591116 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
LINC01535-204ENST00000591116 GAPVD1Q14C86 1478 aa20.04■□□□□ 0.8
LINC01535-204ENST00000591116 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
LINC01535-204ENST00000591116 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
LINC01535-204ENST00000591116 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.77
LINC01535-204ENST00000591116 GRIN2AQ12879 1464 aa19.88■□□□□ 0.77
LINC01535-204ENST00000591116 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
LINC01535-204ENST00000591116 WRNQ14191 1432 aaPredicted RBP eCLIP19.86■□□□□ 0.77
LINC01535-204ENST00000591116 ERCC6L2Q5T890 1561 aa19.85■□□□□ 0.77
LINC01535-204ENST00000591116 CEP170Q5SW79 1584 aa19.83■□□□□ 0.76
LINC01535-204ENST00000591116 BIVM-ERCC5R4GMW8 1640 aa19.82■□□□□ 0.76
LINC01535-204ENST00000591116 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
LINC01535-204ENST00000591116 NUP160Q12769 1436 aa19.8■□□□□ 0.76
LINC01535-204ENST00000591116 FHAD1B1AJZ9 1412 aa19.77■□□□□ 0.76
LINC01535-204ENST00000591116 SHROOM2Q13796 1616 aa19.75■□□□□ 0.75
LINC01535-204ENST00000591116 ERICH3Q5RHP9 1530 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms