RNA–Protein interactions for RNA: ENST00000590815.5

HDHD2-209, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

TSL 3

Gene HDHD2, Length 809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-209ENST00000590815 NISCHQ9Y2I1 1504 aa29.61■■■□□ 2.33
HDHD2-209ENST00000590815 ABCC9O60706 1549 aa27.26■■□□□ 1.96
HDHD2-209ENST00000590815 CCDC180Q9P1Z9 1646 aa26.75■■□□□ 1.87
HDHD2-209ENST00000590815 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
HDHD2-209ENST00000590815 AEBP2Q6ZN18 517 aaPredicted RBP26.38■■□□□ 1.81
HDHD2-209ENST00000590815 DNAJC5BQ9UF47 199 aa26.02■■□□□ 1.76
HDHD2-209ENST00000590815 RB1CC1Q8TDY2 1594 aa25.74■■□□□ 1.71
HDHD2-209ENST00000590815 NACADO15069 1562 aa25.42■■□□□ 1.66
HDHD2-209ENST00000590815 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.64
HDHD2-209ENST00000590815 DCAF8L2P0C7V8 631 aa25.24■■□□□ 1.63
HDHD2-209ENST00000590815 UNC13AQ9UPW8 1703 aa25.14■■□□□ 1.61
HDHD2-209ENST00000590815 BICRAQ9NZM4 1560 aa24.94■■□□□ 1.58
HDHD2-209ENST00000590815 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
HDHD2-209ENST00000590815 CECR2Q9BXF3 1484 aa24.63■■□□□ 1.53
HDHD2-209ENST00000590815 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
HDHD2-209ENST00000590815 SHROOM4Q9ULL8 1493 aa24.6■■□□□ 1.53
HDHD2-209ENST00000590815 ZCCHC6Q5VYS8 1495 aaKnown RBP24.59■■□□□ 1.53
HDHD2-209ENST00000590815 DCAF1Q9Y4B6 1507 aa24.5■■□□□ 1.51
HDHD2-209ENST00000590815 EIF4G1Q04637 1599 aaKnown RBP24.41■■□□□ 1.5
HDHD2-209ENST00000590815 DNAJC5Q9H3Z4 198 aa24.37■■□□□ 1.49
HDHD2-209ENST00000590815 SCRIBQ14160 1630 aa24.31■■□□□ 1.48
HDHD2-209ENST00000590815 CUX2O14529 1486 aa23.75■■□□□ 1.39
HDHD2-209ENST00000590815 ERCC6Q03468 1493 aa23.62■■□□□ 1.37
HDHD2-209ENST00000590815 PHF23Q9BUL5 403 aaPredicted RBP23.48■■□□□ 1.35
HDHD2-209ENST00000590815 NCAPD3P42695 1498 aa23.45■■□□□ 1.34
HDHD2-209ENST00000590815 ATAD2BQ9ULI0 1458 aa23.29■■□□□ 1.32
HDHD2-209ENST00000590815 NESP48681 1621 aa23.24■■□□□ 1.31
HDHD2-209ENST00000590815 SMARCA2P51531 1590 aa23.23■■□□□ 1.31
HDHD2-209ENST00000590815 HMGXB3Q12766 1538 aa23.22■■□□□ 1.31
HDHD2-209ENST00000590815 SMARCA4P51532 1647 aa23.14■■□□□ 1.29
HDHD2-209ENST00000590815 THOC2Q8NI27 1593 aaKnown RBP23.11■■□□□ 1.29
HDHD2-209ENST00000590815 TRIM41Q8WV44 630 aa23.1■■□□□ 1.29
HDHD2-209ENST00000590815 BAZ1BQ9UIG0 1483 aaKnown RBP23.06■■□□□ 1.28
HDHD2-209ENST00000590815 LAMC3Q9Y6N6 1575 aa23.04■■□□□ 1.28
HDHD2-209ENST00000590815 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
HDHD2-209ENST00000590815 KIF21AQ7Z4S6 1674 aa22.96■■□□□ 1.27
HDHD2-209ENST00000590815 PDS5BQ9NTI5 1447 aa22.93■■□□□ 1.26
HDHD2-209ENST00000590815 PEG3Q9GZU2 1588 aa22.89■■□□□ 1.26
HDHD2-209ENST00000590815 MROH2BQ7Z745 1585 aa22.79■■□□□ 1.24
HDHD2-209ENST00000590815 MRC2Q9UBG0 1479 aa22.74■■□□□ 1.23
HDHD2-209ENST00000590815 CADPSQ9ULU8 1353 aa22.72■■□□□ 1.23
HDHD2-209ENST00000590815 WDR62O43379 1518 aa22.69■■□□□ 1.22
HDHD2-209ENST00000590815 OSCARQ8IYS5 282 aa22.62■■□□□ 1.21
HDHD2-209ENST00000590815 CEP164Q9UPV0 1460 aa22.56■■□□□ 1.2
HDHD2-209ENST00000590815 WIZO95785 1651 aa22.55■■□□□ 1.2
HDHD2-209ENST00000590815 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
HDHD2-209ENST00000590815 RSF1Q96T23 1441 aaPredicted RBP22.41■■□□□ 1.18
HDHD2-209ENST00000590815 RIMBP3CA6NJZ7 1639 aa22.33■■□□□ 1.17
HDHD2-209ENST00000590815 RIMBP3BA6NNM3 1639 aa22.33■■□□□ 1.17
HDHD2-209ENST00000590815 RIMBP3Q9UFD9 1639 aa22.33■■□□□ 1.17
HDHD2-209ENST00000590815 CFTRP13569 1480 aa22.33■■□□□ 1.16
HDHD2-209ENST00000590815 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
HDHD2-209ENST00000590815 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
HDHD2-209ENST00000590815 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
HDHD2-209ENST00000590815 ARHGEF11O15085 1522 aa22.2■■□□□ 1.14
HDHD2-209ENST00000590815 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
HDHD2-209ENST00000590815 CYB5RLQ6IPT4 315 aa22.12■■□□□ 1.13
HDHD2-209ENST00000590815 PRDM2Q13029 1718 aa22.11■■□□□ 1.13
HDHD2-209ENST00000590815 ZNF608Q9ULD9 1512 aaPredicted RBP22.1■■□□□ 1.13
HDHD2-209ENST00000590815 TRHP20396 242 aaPredicted RBP22.08■■□□□ 1.13
HDHD2-209ENST00000590815 CCDC88BA6NC98 1476 aa22.02■■□□□ 1.12
HDHD2-209ENST00000590815 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
HDHD2-209ENST00000590815 EIF4G3O43432 1585 aaKnown RBP21.97■■□□□ 1.11
HDHD2-209ENST00000590815 TOPBP1Q92547 1522 aa21.96■■□□□ 1.11
HDHD2-209ENST00000590815 ABCC8Q09428 1581 aa21.95■■□□□ 1.1
HDHD2-209ENST00000590815 CHD1O14646 1710 aa21.94■■□□□ 1.1
HDHD2-209ENST00000590815 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
HDHD2-209ENST00000590815 FBLN2P98095 1184 aa21.89■■□□□ 1.09
HDHD2-209ENST00000590815 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.091e-7■■■■□ 21.1
HDHD2-209ENST00000590815 DNMBPQ6XZF7 1577 aa21.85■■□□□ 1.09
HDHD2-209ENST00000590815 TARBP1Q13395 1621 aaKnown RBP21.8■■□□□ 1.08
HDHD2-209ENST00000590815 POLA1P09884 1462 aaPredicted RBP21.7■■□□□ 1.06
HDHD2-209ENST00000590815 TDRD9Q8NDG6 1382 aaKnown RBP21.63■■□□□ 1.05
HDHD2-209ENST00000590815 SYNJ1O43426 1573 aa21.63■■□□□ 1.05
HDHD2-209ENST00000590815 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
HDHD2-209ENST00000590815 CHMP7Q8WUX9 453 aaPredicted RBP21.63■■□□□ 1.05
HDHD2-209ENST00000590815 CLASP1Q7Z460 1538 aa21.63■■□□□ 1.05
HDHD2-209ENST00000590815 RAD54L2Q9Y4B4 1467 aa21.63■■□□□ 1.05
HDHD2-209ENST00000590815 SOGA1O94964 1423 aa21.63■■□□□ 1.05
HDHD2-209ENST00000590815 SNAPC4Q5SXM2 1469 aa21.61■■□□□ 1.05
HDHD2-209ENST00000590815 WDR97A6NE52 1622 aa21.58■■□□□ 1.05
HDHD2-209ENST00000590815 MAGI1Q96QZ7 1491 aaPredicted RBP21.55■■□□□ 1.04
HDHD2-209ENST00000590815 GRIN2BQ13224 1484 aa21.5■■□□□ 1.03
HDHD2-209ENST00000590815 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
HDHD2-209ENST00000590815 SYNJ2O15056 1496 aa21.49■■□□□ 1.03
HDHD2-209ENST00000590815 GAPVD1Q14C86 1478 aa21.47■■□□□ 1.03
HDHD2-209ENST00000590815 CUX1P39880 1505 aa21.4■■□□□ 1.02
HDHD2-209ENST00000590815 PBRM1Q86U86 1689 aa21.38■■□□□ 1.01
HDHD2-209ENST00000590815 ERCC6L2Q5T890 1561 aa21.23■□□□□ 0.99
HDHD2-209ENST00000590815 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
HDHD2-209ENST00000590815 ABCA10Q8WWZ4 1543 aa21.21■□□□□ 0.99
HDHD2-209ENST00000590815 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
HDHD2-209ENST00000590815 CEP170Q5SW79 1584 aa21.2■□□□□ 0.98
HDHD2-209ENST00000590815 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
HDHD2-209ENST00000590815 KIF13AQ9H1H9 1805 aa21.18■□□□□ 0.98
HDHD2-209ENST00000590815 WRNQ14191 1432 aaPredicted RBP eCLIP21.17■□□□□ 0.98
HDHD2-209ENST00000590815 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
HDHD2-209ENST00000590815 NUP160Q12769 1436 aa21.13■□□□□ 0.97
HDHD2-209ENST00000590815 SHROOM2Q13796 1616 aa21.11■□□□□ 0.97
HDHD2-209ENST00000590815 ADAMTS12P58397 1594 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms