RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 NISCHQ9Y2I1 1504 aa22.77■■□□□ 1.24
HMGN1P31-201ENST00000590085 CCDC180Q9P1Z9 1646 aa20.33■□□□□ 0.84
HMGN1P31-201ENST00000590085 ABCC9O60706 1549 aa19.56■□□□□ 0.72
HMGN1P31-201ENST00000590085 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
HMGN1P31-201ENST00000590085 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
HMGN1P31-201ENST00000590085 NACADO15069 1562 aa18.97■□□□□ 0.63
HMGN1P31-201ENST00000590085 RB1CC1Q8TDY2 1594 aa18.96■□□□□ 0.63
HMGN1P31-201ENST00000590085 MYO15BQ96JP2 1530 aa18.91■□□□□ 0.62
HMGN1P31-201ENST00000590085 DCAF1Q9Y4B6 1507 aa18.89■□□□□ 0.61
HMGN1P31-201ENST00000590085 CHIC1Q5VXU3 224 aa18.73■□□□□ 0.59
HMGN1P31-201ENST00000590085 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
HMGN1P31-201ENST00000590085 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
HMGN1P31-201ENST00000590085 SCRIBQ14160 1630 aa18.46■□□□□ 0.55
HMGN1P31-201ENST00000590085 BICRAQ9NZM4 1560 aa18.43■□□□□ 0.54
HMGN1P31-201ENST00000590085 SHROOM4Q9ULL8 1493 aa18.23■□□□□ 0.51
HMGN1P31-201ENST00000590085 PABPN1Q86U42 306 aaKnown RBP eCLIP18.19■□□□□ 0.5
HMGN1P31-201ENST00000590085 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
HMGN1P31-201ENST00000590085 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
HMGN1P31-201ENST00000590085 DNAJC5BQ9UF47 199 aa17.76■□□□□ 0.43
HMGN1P31-201ENST00000590085 SMARCA4P51532 1647 aa17.7■□□□□ 0.42
HMGN1P31-201ENST00000590085 CECR2Q9BXF3 1484 aa17.69■□□□□ 0.42
HMGN1P31-201ENST00000590085 BAZ1AQ9NRL2 1556 aaPredicted RBP17.65■□□□□ 0.42
HMGN1P31-201ENST00000590085 MROH2BQ7Z745 1585 aa17.54■□□□□ 0.4
HMGN1P31-201ENST00000590085 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
HMGN1P31-201ENST00000590085 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
HMGN1P31-201ENST00000590085 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
HMGN1P31-201ENST00000590085 HMGXB3Q12766 1538 aa17.46■□□□□ 0.39
HMGN1P31-201ENST00000590085 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
HMGN1P31-201ENST00000590085 WIZO95785 1651 aa17.42■□□□□ 0.38
HMGN1P31-201ENST00000590085 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
HMGN1P31-201ENST00000590085 RSF1Q96T23 1441 aaPredicted RBP17.34■□□□□ 0.37
HMGN1P31-201ENST00000590085 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
HMGN1P31-201ENST00000590085 LAMC3Q9Y6N6 1575 aa17.04■□□□□ 0.32
HMGN1P31-201ENST00000590085 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
HMGN1P31-201ENST00000590085 NESP48681 1621 aa16.99■□□□□ 0.31
HMGN1P31-201ENST00000590085 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
HMGN1P31-201ENST00000590085 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
HMGN1P31-201ENST00000590085 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.29
HMGN1P31-201ENST00000590085 CFTRP13569 1480 aa16.88■□□□□ 0.29
HMGN1P31-201ENST00000590085 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
HMGN1P31-201ENST00000590085 ERCC6Q03468 1493 aa16.84■□□□□ 0.29
HMGN1P31-201ENST00000590085 THOC2Q8NI27 1593 aaKnown RBP16.83■□□□□ 0.28
HMGN1P31-201ENST00000590085 PDS5BQ9NTI5 1447 aa16.8■□□□□ 0.28
HMGN1P31-201ENST00000590085 FANCD2Q9BXW9 1451 aa16.74■□□□□ 0.27
HMGN1P31-201ENST00000590085 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
HMGN1P31-201ENST00000590085 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
HMGN1P31-201ENST00000590085 WDR62O43379 1518 aa16.68■□□□□ 0.26
HMGN1P31-201ENST00000590085 CUX2O14529 1486 aa16.67■□□□□ 0.26
HMGN1P31-201ENST00000590085 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
HMGN1P31-201ENST00000590085 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
HMGN1P31-201ENST00000590085 DNMBPQ6XZF7 1577 aa16.55■□□□□ 0.24
HMGN1P31-201ENST00000590085 TOPBP1Q92547 1522 aa16.52■□□□□ 0.24
HMGN1P31-201ENST00000590085 ABCC8Q09428 1581 aa16.5■□□□□ 0.23
HMGN1P31-201ENST00000590085 CUX1P39880 1505 aa16.46■□□□□ 0.23
HMGN1P31-201ENST00000590085 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
HMGN1P31-201ENST00000590085 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
HMGN1P31-201ENST00000590085 PHF23Q9BUL5 403 aaPredicted RBP16.41■□□□□ 0.22
HMGN1P31-201ENST00000590085 SYNJ1O43426 1573 aa16.4■□□□□ 0.22
HMGN1P31-201ENST00000590085 TOP2BQ02880 1626 aa16.4■□□□□ 0.22
HMGN1P31-201ENST00000590085 WDR97A6NE52 1622 aa16.39■□□□□ 0.21
HMGN1P31-201ENST00000590085 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
HMGN1P31-201ENST00000590085 FGD5Q6ZNL6 1462 aa16.36■□□□□ 0.21
HMGN1P31-201ENST00000590085 IFT140Q96RY7 1462 aa16.35■□□□□ 0.21
HMGN1P31-201ENST00000590085 WRNQ14191 1432 aaPredicted RBP eCLIP16.34■□□□□ 0.21
HMGN1P31-201ENST00000590085 EIF4G3O43432 1585 aaKnown RBP16.33■□□□□ 0.2
HMGN1P31-201ENST00000590085 ZNF608Q9ULD9 1512 aaPredicted RBP16.28■□□□□ 0.2
HMGN1P31-201ENST00000590085 RAD54L2Q9Y4B4 1467 aa16.27■□□□□ 0.19
HMGN1P31-201ENST00000590085 SOGA1O94964 1423 aa16.24■□□□□ 0.19
HMGN1P31-201ENST00000590085 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
HMGN1P31-201ENST00000590085 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
HMGN1P31-201ENST00000590085 ABCA10Q8WWZ4 1543 aa16.22■□□□□ 0.19
HMGN1P31-201ENST00000590085 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.18
HMGN1P31-201ENST00000590085 CHD1O14646 1710 aa16.15■□□□□ 0.18
HMGN1P31-201ENST00000590085 TDRD9Q8NDG6 1382 aaKnown RBP16.11■□□□□ 0.17
HMGN1P31-201ENST00000590085 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
HMGN1P31-201ENST00000590085 GRIN2BQ13224 1484 aa16.09■□□□□ 0.17
HMGN1P31-201ENST00000590085 SNAPC4Q5SXM2 1469 aa16.06■□□□□ 0.16
HMGN1P31-201ENST00000590085 MAGI1Q96QZ7 1491 aaPredicted RBP16.06■□□□□ 0.16
HMGN1P31-201ENST00000590085 ADAMTS12P58397 1594 aa16.05■□□□□ 0.16
HMGN1P31-201ENST00000590085 ERICH3Q5RHP9 1530 aa16.04■□□□□ 0.16
HMGN1P31-201ENST00000590085 CUL7Q14999 1698 aa15.99■□□□□ 0.15
HMGN1P31-201ENST00000590085 SYNJ2O15056 1496 aa15.98■□□□□ 0.15
HMGN1P31-201ENST00000590085 KIF27Q86VH2 1401 aa15.97■□□□□ 0.15
HMGN1P31-201ENST00000590085 TRIM41Q8WV44 630 aa15.91■□□□□ 0.14
HMGN1P31-201ENST00000590085 FHAD1B1AJZ9 1412 aa15.91■□□□□ 0.14
HMGN1P31-201ENST00000590085 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
HMGN1P31-201ENST00000590085 CLASP1Q7Z460 1538 aa15.9■□□□□ 0.14
HMGN1P31-201ENST00000590085 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
HMGN1P31-201ENST00000590085 DNAJC5Q9H3Z4 198 aa15.88■□□□□ 0.13
HMGN1P31-201ENST00000590085 CEP170Q5SW79 1584 aa15.87■□□□□ 0.13
HMGN1P31-201ENST00000590085 IGF1RP08069 1367 aa15.86■□□□□ 0.13
HMGN1P31-201ENST00000590085 OSCARQ8IYS5 282 aa15.85■□□□□ 0.13
HMGN1P31-201ENST00000590085 NUP160Q12769 1436 aa15.83■□□□□ 0.12
HMGN1P31-201ENST00000590085 FBLN2P98095 1184 aa15.82■□□□□ 0.12
HMGN1P31-201ENST00000590085 CHMP7Q8WUX9 453 aaPredicted RBP15.82■□□□□ 0.12
HMGN1P31-201ENST00000590085 SHROOM2Q13796 1616 aa15.79■□□□□ 0.12
HMGN1P31-201ENST00000590085 RIMBP3CA6NJZ7 1639 aa15.79■□□□□ 0.12
HMGN1P31-201ENST00000590085 RIMBP3BA6NNM3 1639 aa15.79■□□□□ 0.12
HMGN1P31-201ENST00000590085 RIMBP3Q9UFD9 1639 aa15.79■□□□□ 0.12
HMGN1P31-201ENST00000590085 CTTNBP2Q8WZ74 1663 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms