RNA–Protein interactions for RNA: ENST00000589492.1

BECN1-209, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-209ENST00000589492 NISCHQ9Y2I1 1504 aa16.82■□□□□ 0.28
BECN1-209ENST00000589492 ABCC9O60706 1549 aa15.84■□□□□ 0.13
BECN1-209ENST00000589492 AEBP2Q6ZN18 517 aaPredicted RBP15.7■□□□□ 0.1
BECN1-209ENST00000589492 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
BECN1-209ENST00000589492 DNAJC5BQ9UF47 199 aa15.3■□□□□ 0.04
BECN1-209ENST00000589492 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
BECN1-209ENST00000589492 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
BECN1-209ENST00000589492 CHIC1Q5VXU3 224 aa14.62□□□□□ -0.07
BECN1-209ENST00000589492 NACADO15069 1562 aa14.58□□□□□ -0.08
BECN1-209ENST00000589492 UNC13AQ9UPW8 1703 aa14.55□□□□□ -0.08
BECN1-209ENST00000589492 BICRAQ9NZM4 1560 aa14.44□□□□□ -0.1
BECN1-209ENST00000589492 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
BECN1-209ENST00000589492 DNAJC5Q9H3Z4 198 aa14.35□□□□□ -0.11
BECN1-209ENST00000589492 CECR2Q9BXF3 1484 aa14.29□□□□□ -0.12
BECN1-209ENST00000589492 CC2D2AQ9P2K1 1620 aa14.27□□□□□ -0.12
BECN1-209ENST00000589492 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
BECN1-209ENST00000589492 EIF4G1Q04637 1599 aaKnown RBP14.11□□□□□ -0.15
BECN1-209ENST00000589492 SHROOM4Q9ULL8 1493 aa14.11□□□□□ -0.15
BECN1-209ENST00000589492 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
BECN1-209ENST00000589492 ZCCHC6Q5VYS8 1495 aaKnown RBP13.85□□□□□ -0.19
BECN1-209ENST00000589492 DCAF1Q9Y4B6 1507 aa13.83□□□□□ -0.2
BECN1-209ENST00000589492 CUX2O14529 1486 aa13.8□□□□□ -0.2
BECN1-209ENST00000589492 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
BECN1-209ENST00000589492 TRIM41Q8WV44 630 aa13.57□□□□□ -0.24
BECN1-209ENST00000589492 NESP48681 1621 aa13.47□□□□□ -0.25
BECN1-209ENST00000589492 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
BECN1-209ENST00000589492 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
BECN1-209ENST00000589492 THOC2Q8NI27 1593 aaKnown RBP13.43□□□□□ -0.26
BECN1-209ENST00000589492 ATAD2BQ9ULI0 1458 aa13.37□□□□□ -0.27
BECN1-209ENST00000589492 HMGXB3Q12766 1538 aa13.33□□□□□ -0.28
BECN1-209ENST00000589492 SMARCA2P51531 1590 aa13.32□□□□□ -0.28
BECN1-209ENST00000589492 KIF21AQ7Z4S6 1674 aa13.3□□□□□ -0.28
BECN1-209ENST00000589492 SMARCA4P51532 1647 aa13.25□□□□□ -0.29
BECN1-209ENST00000589492 LAMC3Q9Y6N6 1575 aa13.25□□□□□ -0.29
BECN1-209ENST00000589492 BAZ1BQ9UIG0 1483 aaKnown RBP13.21□□□□□ -0.3
BECN1-209ENST00000589492 PHF23Q9BUL5 403 aaPredicted RBP13.19□□□□□ -0.3
BECN1-209ENST00000589492 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
BECN1-209ENST00000589492 PDS5BQ9NTI5 1447 aa13.16□□□□□ -0.3
BECN1-209ENST00000589492 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
BECN1-209ENST00000589492 WDR62O43379 1518 aa13.1□□□□□ -0.31
BECN1-209ENST00000589492 PEG3Q9GZU2 1588 aa13.09□□□□□ -0.31
BECN1-209ENST00000589492 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
BECN1-209ENST00000589492 CADPSQ9ULU8 1353 aa13.03□□□□□ -0.32
BECN1-209ENST00000589492 RIMBP3CA6NJZ7 1639 aa13.02□□□□□ -0.32
BECN1-209ENST00000589492 RIMBP3BA6NNM3 1639 aa13.02□□□□□ -0.32
BECN1-209ENST00000589492 RIMBP3Q9UFD9 1639 aa13.02□□□□□ -0.32
BECN1-209ENST00000589492 MROH2BQ7Z745 1585 aa12.99□□□□□ -0.33
BECN1-209ENST00000589492 CEP164Q9UPV0 1460 aa12.97□□□□□ -0.33
BECN1-209ENST00000589492 ARHGEF11O15085 1522 aa12.92□□□□□ -0.34
BECN1-209ENST00000589492 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
BECN1-209ENST00000589492 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
BECN1-209ENST00000589492 URB2Q14146 1524 aaKnown RBP12.85□□□□□ -0.35
BECN1-209ENST00000589492 CYB5RLQ6IPT4 315 aa12.84□□□□□ -0.35
BECN1-209ENST00000589492 WIZO95785 1651 aa12.83□□□□□ -0.36
BECN1-209ENST00000589492 CFTRP13569 1480 aa12.78□□□□□ -0.36
BECN1-209ENST00000589492 ZNF608Q9ULD9 1512 aaPredicted RBP12.78□□□□□ -0.36
BECN1-209ENST00000589492 ARAP1Q96P48 1450 aa12.76□□□□□ -0.37
BECN1-209ENST00000589492 IFT140Q96RY7 1462 aa12.71□□□□□ -0.38
BECN1-209ENST00000589492 CHD1O14646 1710 aa12.71□□□□□ -0.38
BECN1-209ENST00000589492 EIF4G3O43432 1585 aaKnown RBP12.69□□□□□ -0.38
BECN1-209ENST00000589492 PRDM2Q13029 1718 aa12.66□□□□□ -0.38
BECN1-209ENST00000589492 POTEDQ86YR6 584 aa12.66□□□□□ -0.38
BECN1-209ENST00000589492 RSF1Q96T23 1441 aaPredicted RBP12.62□□□□□ -0.39
BECN1-209ENST00000589492 FOXD1Q16676 465 aa12.62□□□□□ -0.39
BECN1-209ENST00000589492 TOPBP1Q92547 1522 aa12.61□□□□□ -0.39
BECN1-209ENST00000589492 FBLN2P98095 1184 aa12.6□□□□□ -0.39
BECN1-209ENST00000589492 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.39
BECN1-209ENST00000589492 TOP2AP11388 1531 aaKnown RBP12.59□□□□□ -0.39
BECN1-209ENST00000589492 TARBP1Q13395 1621 aaKnown RBP12.55□□□□□ -0.4
BECN1-209ENST00000589492 CLASP1Q7Z460 1538 aa12.52□□□□□ -0.41
BECN1-209ENST00000589492 DNMBPQ6XZF7 1577 aa12.52□□□□□ -0.41
BECN1-209ENST00000589492 ABCC8Q09428 1581 aa12.5□□□□□ -0.41
BECN1-209ENST00000589492 CCDC88BA6NC98 1476 aa12.46□□□□□ -0.42
BECN1-209ENST00000589492 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.42
BECN1-209ENST00000589492 SYNJ1O43426 1573 aa12.45□□□□□ -0.42
BECN1-209ENST00000589492 SNAPC4Q5SXM2 1469 aa12.45□□□□□ -0.42
BECN1-209ENST00000589492 RAD54L2Q9Y4B4 1467 aa12.44□□□□□ -0.42
BECN1-209ENST00000589492 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
BECN1-209ENST00000589492 GAPVD1Q14C86 1478 aa12.4□□□□□ -0.42
BECN1-209ENST00000589492 CHMP7Q8WUX9 453 aaPredicted RBP12.4□□□□□ -0.42
BECN1-209ENST00000589492 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
BECN1-209ENST00000589492 SOGA1O94964 1423 aa12.37□□□□□ -0.43
BECN1-209ENST00000589492 MAGI1Q96QZ7 1491 aaPredicted RBP12.36□□□□□ -0.43
BECN1-209ENST00000589492 WDR97A6NE52 1622 aa12.33□□□□□ -0.43
BECN1-209ENST00000589492 SYNJ2O15056 1496 aa12.33□□□□□ -0.44
BECN1-209ENST00000589492 ERCC6L2Q5T890 1561 aa12.32□□□□□ -0.44
BECN1-209ENST00000589492 GRIN2BQ13224 1484 aa12.32□□□□□ -0.44
BECN1-209ENST00000589492 KIF13AQ9H1H9 1805 aa12.31□□□□□ -0.44
BECN1-209ENST00000589492 FGD5Q6ZNL6 1462 aa12.31□□□□□ -0.44
BECN1-209ENST00000589492 PBRM1Q86U86 1689 aa12.29□□□□□ -0.44
BECN1-209ENST00000589492 CUX1P39880 1505 aa12.23□□□□□ -0.45
BECN1-209ENST00000589492 KDM4FA0A1W2PPD8 638 aa12.23□□□□□ -0.45
BECN1-209ENST00000589492 CEP170Q5SW79 1584 aa12.22□□□□□ -0.45
BECN1-209ENST00000589492 ABCA5Q8WWZ7 1642 aa12.18□□□□□ -0.46
BECN1-209ENST00000589492 GRIN2AQ12879 1464 aa12.17□□□□□ -0.46
BECN1-209ENST00000589492 SHROOM2Q13796 1616 aa12.16□□□□□ -0.46
BECN1-209ENST00000589492 NUP160Q12769 1436 aa12.14□□□□□ -0.47
BECN1-209ENST00000589492 FAM69CQ0P6D2 419 aa12.14□□□□□ -0.47
BECN1-209ENST00000589492 KDM6BO15054 1643 aa12.14□□□□□ -0.47
BECN1-209ENST00000589492 ABCC10Q5T3U5 1492 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms