RNA–Protein interactions for RNA: ENST00000589420.1

ZNF397-206, Transcript of zinc finger protein 397, humanhuman

TSL 1 (best)

Gene ZNF397, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-206ENST00000589420 NISCHQ9Y2I1 1504 aa27.53■■■□□ 2
ZNF397-206ENST00000589420 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
ZNF397-206ENST00000589420 ABCC9O60706 1549 aa24.64■■□□□ 1.53
ZNF397-206ENST00000589420 RB1CC1Q8TDY2 1594 aa23.49■■□□□ 1.35
ZNF397-206ENST00000589420 NACADO15069 1562 aa23.35■■□□□ 1.33
ZNF397-206ENST00000589420 DCAF8L2P0C7V8 631 aa23.21■■□□□ 1.31
ZNF397-206ENST00000589420 DNAJC5BQ9UF47 199 aa23.08■■□□□ 1.29
ZNF397-206ENST00000589420 MYO15BQ96JP2 1530 aa23.06■■□□□ 1.28
ZNF397-206ENST00000589420 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
ZNF397-206ENST00000589420 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.26
ZNF397-206ENST00000589420 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
ZNF397-206ENST00000589420 ZCCHC6Q5VYS8 1495 aaKnown RBP22.82■■□□□ 1.24
ZNF397-206ENST00000589420 BICRAQ9NZM4 1560 aa22.78■■□□□ 1.24
ZNF397-206ENST00000589420 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
ZNF397-206ENST00000589420 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
ZNF397-206ENST00000589420 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
ZNF397-206ENST00000589420 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
ZNF397-206ENST00000589420 CC2D2AQ9P2K1 1620 aa22.26■■□□□ 1.15
ZNF397-206ENST00000589420 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
ZNF397-206ENST00000589420 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
ZNF397-206ENST00000589420 NCAPD3P42695 1498 aa21.57■■□□□ 1.04
ZNF397-206ENST00000589420 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
ZNF397-206ENST00000589420 SMARCA4P51532 1647 aa21.45■■□□□ 1.02
ZNF397-206ENST00000589420 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
ZNF397-206ENST00000589420 HMGXB3Q12766 1538 aa21.39■■□□□ 1.02
ZNF397-206ENST00000589420 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
ZNF397-206ENST00000589420 ERCC6Q03468 1493 aa21.3■■□□□ 1
ZNF397-206ENST00000589420 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
ZNF397-206ENST00000589420 PEG3Q9GZU2 1588 aa21.27■□□□□ 0.99
ZNF397-206ENST00000589420 CUX2O14529 1486 aa21.26■□□□□ 0.99
ZNF397-206ENST00000589420 DNAJC5Q9H3Z4 198 aa21.22■□□□□ 0.99
ZNF397-206ENST00000589420 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
ZNF397-206ENST00000589420 NESP48681 1621 aa21.16■□□□□ 0.98
ZNF397-206ENST00000589420 LAMC3Q9Y6N6 1575 aa21.06■□□□□ 0.96
ZNF397-206ENST00000589420 PDS5BQ9NTI5 1447 aa20.96■□□□□ 0.95
ZNF397-206ENST00000589420 THOC2Q8NI27 1593 aaKnown RBP20.95■□□□□ 0.94
ZNF397-206ENST00000589420 WIZO95785 1651 aa20.91■□□□□ 0.94
ZNF397-206ENST00000589420 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
ZNF397-206ENST00000589420 KIF21AQ7Z4S6 1674 aa20.87■□□□□ 0.93
ZNF397-206ENST00000589420 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
ZNF397-206ENST00000589420 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
ZNF397-206ENST00000589420 WDR62O43379 1518 aa20.7■□□□□ 0.9
ZNF397-206ENST00000589420 TOP2AP11388 1531 aaKnown RBP20.69■□□□□ 0.9
ZNF397-206ENST00000589420 CEP164Q9UPV0 1460 aa20.68■□□□□ 0.9
ZNF397-206ENST00000589420 CFTRP13569 1480 aa20.67■□□□□ 0.9
ZNF397-206ENST00000589420 FANCD2Q9BXW9 1451 aa20.65■□□□□ 0.9
ZNF397-206ENST00000589420 URB2Q14146 1524 aaKnown RBP20.47■□□□□ 0.87
ZNF397-206ENST00000589420 CCDC88BA6NC98 1476 aa20.45■□□□□ 0.86
ZNF397-206ENST00000589420 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
ZNF397-206ENST00000589420 OSCARQ8IYS5 282 aa20.31■□□□□ 0.84
ZNF397-206ENST00000589420 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
ZNF397-206ENST00000589420 IFT140Q96RY7 1462 aa20.27■□□□□ 0.84
ZNF397-206ENST00000589420 ABCC8Q09428 1581 aa20.26■□□□□ 0.83
ZNF397-206ENST00000589420 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
ZNF397-206ENST00000589420 ZNF608Q9ULD9 1512 aaPredicted RBP20.21■□□□□ 0.83
ZNF397-206ENST00000589420 DNMBPQ6XZF7 1577 aa20.19■□□□□ 0.82
ZNF397-206ENST00000589420 EIF4G3O43432 1585 aaKnown RBP20.08■□□□□ 0.81
ZNF397-206ENST00000589420 POLA1P09884 1462 aaPredicted RBP20.06■□□□□ 0.8
ZNF397-206ENST00000589420 TARBP1Q13395 1621 aaKnown RBP20.06■□□□□ 0.8
ZNF397-206ENST00000589420 AQRO60306 1485 aaKnown RBP eCLIP20.04■□□□□ 0.88e-7■■■■■ 28.7
ZNF397-206ENST00000589420 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
ZNF397-206ENST00000589420 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
ZNF397-206ENST00000589420 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
ZNF397-206ENST00000589420 SOGA1O94964 1423 aa19.98■□□□□ 0.79
ZNF397-206ENST00000589420 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
ZNF397-206ENST00000589420 ARHGEF11O15085 1522 aa19.95■□□□□ 0.78
ZNF397-206ENST00000589420 FGD5Q6ZNL6 1462 aa19.93■□□□□ 0.78
ZNF397-206ENST00000589420 TDRD9Q8NDG6 1382 aaKnown RBP19.92■□□□□ 0.78
ZNF397-206ENST00000589420 FBLN2P98095 1184 aa19.91■□□□□ 0.78
ZNF397-206ENST00000589420 CUX1P39880 1505 aa19.91■□□□□ 0.78
ZNF397-206ENST00000589420 WDR97A6NE52 1622 aa19.91■□□□□ 0.78
ZNF397-206ENST00000589420 CHD1O14646 1710 aa19.9■□□□□ 0.78
ZNF397-206ENST00000589420 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
ZNF397-206ENST00000589420 SNAPC4Q5SXM2 1469 aa19.83■□□□□ 0.76
ZNF397-206ENST00000589420 CYB5RLQ6IPT4 315 aa19.82■□□□□ 0.76
ZNF397-206ENST00000589420 GRIN2BQ13224 1484 aa19.81■□□□□ 0.76
ZNF397-206ENST00000589420 MAGI1Q96QZ7 1491 aaPredicted RBP19.81■□□□□ 0.76
ZNF397-206ENST00000589420 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
ZNF397-206ENST00000589420 ARAP1Q96P48 1450 aa19.75■□□□□ 0.75
ZNF397-206ENST00000589420 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
ZNF397-206ENST00000589420 GAPVD1Q14C86 1478 aa19.73■□□□□ 0.75
ZNF397-206ENST00000589420 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
ZNF397-206ENST00000589420 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
ZNF397-206ENST00000589420 ABCA10Q8WWZ4 1543 aa19.72■□□□□ 0.75
ZNF397-206ENST00000589420 PBRM1Q86U86 1689 aa19.67■□□□□ 0.74
ZNF397-206ENST00000589420 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
ZNF397-206ENST00000589420 ABCA5Q8WWZ7 1642 aa19.66■□□□□ 0.74
ZNF397-206ENST00000589420 TOP2BQ02880 1626 aa19.6■□□□□ 0.73
ZNF397-206ENST00000589420 BIVM-ERCC5R4GMW8 1640 aa19.59■□□□□ 0.73
ZNF397-206ENST00000589420 PHF23Q9BUL5 403 aaPredicted RBP19.59■□□□□ 0.73
ZNF397-206ENST00000589420 TRHP20396 242 aaPredicted RBP19.58■□□□□ 0.72
ZNF397-206ENST00000589420 GRIN2AQ12879 1464 aa19.54■□□□□ 0.72
ZNF397-206ENST00000589420 ADAMTS12P58397 1594 aa19.52■□□□□ 0.71
ZNF397-206ENST00000589420 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
ZNF397-206ENST00000589420 FHAD1B1AJZ9 1412 aa19.5■□□□□ 0.71
ZNF397-206ENST00000589420 NUP160Q12769 1436 aa19.49■□□□□ 0.71
ZNF397-206ENST00000589420 ERICH3Q5RHP9 1530 aa19.48■□□□□ 0.71
ZNF397-206ENST00000589420 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
ZNF397-206ENST00000589420 ERCC6L2Q5T890 1561 aa19.39■□□□□ 0.69
ZNF397-206ENST00000589420 SHROOM2Q13796 1616 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms