RNA–Protein interactions for RNA: ENST00000589341.5

APPBP2-204, Transcript of amyloid beta precursor protein binding protein 2, humanhuman

TSL 1 (best)

Gene APPBP2, Length 1,705 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPBP2-204ENST00000589341 NISCHQ9Y2I1 1504 aa48.26■■■■■ 5.32
APPBP2-204ENST00000589341 CCDC180Q9P1Z9 1646 aa41.93■■■■■ 4.3
APPBP2-204ENST00000589341 ZCCHC6Q5VYS8 1495 aaKnown RBP40.65■■■■■ 4.1
APPBP2-204ENST00000589341 DCAF1Q9Y4B6 1507 aa40.02■■■■■ 4
APPBP2-204ENST00000589341 DCAF8L2P0C7V8 631 aa39.49■■■■□ 3.91
APPBP2-204ENST00000589341 SHROOM4Q9ULL8 1493 aa39.48■■■■□ 3.91
APPBP2-204ENST00000589341 MYO15BQ96JP2 1530 aa39.4■■■■□ 3.9
APPBP2-204ENST00000589341 ABCC9O60706 1549 aa39.07■■■■□ 3.85
APPBP2-204ENST00000589341 NACADO15069 1562 aa38.94■■■■□ 3.82
APPBP2-204ENST00000589341 SCRIBQ14160 1630 aa38.47■■■■□ 3.75
APPBP2-204ENST00000589341 RB1CC1Q8TDY2 1594 aa38.46■■■■□ 3.75
APPBP2-204ENST00000589341 SUPT5HO00267 1087 aaKnown RBP38.24■■■■□ 3.71
APPBP2-204ENST00000589341 UNC13AQ9UPW8 1703 aa37.66■■■■□ 3.62
APPBP2-204ENST00000589341 RSF1Q96T23 1441 aaPredicted RBP37.59■■■■□ 3.61
APPBP2-204ENST00000589341 CECR2Q9BXF3 1484 aa37.39■■■■□ 3.58
APPBP2-204ENST00000589341 BICRAQ9NZM4 1560 aa37.28■■■■□ 3.56
APPBP2-204ENST00000589341 MROH2BQ7Z745 1585 aa37.25■■■■□ 3.55
APPBP2-204ENST00000589341 BAZ1AQ9NRL2 1556 aaPredicted RBP37.25■■■■□ 3.55
APPBP2-204ENST00000589341 SMARCA4P51532 1647 aa36.99■■■■□ 3.51
APPBP2-204ENST00000589341 WIZO95785 1651 aa36.95■■■■□ 3.51
APPBP2-204ENST00000589341 CHIC1Q5VXU3 224 aa36.94■■■■□ 3.5
APPBP2-204ENST00000589341 PABPN1Q86U42 306 aaKnown RBP eCLIP36.9■■■■□ 3.5
APPBP2-204ENST00000589341 TOP2AP11388 1531 aaKnown RBP36.66■■■■□ 3.46
APPBP2-204ENST00000589341 PEG3Q9GZU2 1588 aa36.61■■■■□ 3.45
APPBP2-204ENST00000589341 SMARCA2P51531 1590 aa36.31■■■■□ 3.4
APPBP2-204ENST00000589341 ATAD2BQ9ULI0 1458 aa36.28■■■■□ 3.4
APPBP2-204ENST00000589341 CCDC88BA6NC98 1476 aa36.25■■■■□ 3.39
APPBP2-204ENST00000589341 EIF4G1Q04637 1599 aaKnown RBP36.22■■■■□ 3.39
APPBP2-204ENST00000589341 BAZ1BQ9UIG0 1483 aaKnown RBP36.08■■■■□ 3.37
APPBP2-204ENST00000589341 TRIM41Q8WV44 630 aa36■■■■□ 3.35
APPBP2-204ENST00000589341 HMGXB3Q12766 1538 aa35.93■■■■□ 3.34
APPBP2-204ENST00000589341 NCAPD3P42695 1498 aa35.93■■■■□ 3.34
APPBP2-204ENST00000589341 ABCC8Q09428 1581 aa35.57■■■■□ 3.28
APPBP2-204ENST00000589341 LOC105371045A0A1W2PR82 267 aa35.44■■■■□ 3.26
APPBP2-204ENST00000589341 CC2D2AQ9P2K1 1620 aa35.43■■■■□ 3.26
APPBP2-204ENST00000589341 WRNQ14191 1432 aaPredicted RBP eCLIP35.37■■■■□ 3.25
APPBP2-204ENST00000589341 CFTRP13569 1480 aa35.24■■■■□ 3.23
APPBP2-204ENST00000589341 FAM9AQ8IZU1 332 aaPredicted RBP35.23■■■■□ 3.23
APPBP2-204ENST00000589341 EEA1Q15075 1411 aa35.2■■■■□ 3.22
APPBP2-204ENST00000589341 SYNJ1O43426 1573 aa35.17■■■■□ 3.22
APPBP2-204ENST00000589341 PRDM2Q13029 1718 aa35.11■■■■□ 3.21
APPBP2-204ENST00000589341 TOP2BQ02880 1626 aa35.06■■■■□ 3.2
APPBP2-204ENST00000589341 BIVM-ERCC5R4GMW8 1640 aa35.03■■■■□ 3.2
APPBP2-204ENST00000589341 SOGA1O94964 1423 aa35.01■■■■□ 3.2
APPBP2-204ENST00000589341 CADPSQ9ULU8 1353 aa35.01■■■■□ 3.19
APPBP2-204ENST00000589341 CSRNP3Q8WYN3 585 aa34.86■■■■□ 3.17
APPBP2-204ENST00000589341 RUSC2Q8N2Y8 1516 aa34.83■■■■□ 3.17
APPBP2-204ENST00000589341 CUX1P39880 1505 aa34.82■■■■□ 3.16
APPBP2-204ENST00000589341 KIF21BO75037 1637 aa34.67■■■■□ 3.14
APPBP2-204ENST00000589341 GOLGA3Q08378 1498 aa34.65■■■■□ 3.14
APPBP2-204ENST00000589341 TNIKQ9UKE5 1360 aa34.65■■■■□ 3.14
APPBP2-204ENST00000589341 CEP164Q9UPV0 1460 aa34.63■■■■□ 3.13
APPBP2-204ENST00000589341 LAMC3Q9Y6N6 1575 aa34.63■■■■□ 3.13
APPBP2-204ENST00000589341 EHMT2Q96KQ7 1210 aa34.61■■■■□ 3.13
APPBP2-204ENST00000589341 FANCD2Q9BXW9 1451 aa34.6■■■■□ 3.13
APPBP2-204ENST00000589341 KIF27Q86VH2 1401 aa34.46■■■■□ 3.11
APPBP2-204ENST00000589341 NESP48681 1621 aa34.45■■■■□ 3.11
APPBP2-204ENST00000589341 CEP162Q5TB80 1403 aa34.44■■■■□ 3.1
APPBP2-204ENST00000589341 DNMBPQ6XZF7 1577 aa34.4■■■■□ 3.1
APPBP2-204ENST00000589341 ERICH3Q5RHP9 1530 aa34.38■■■■□ 3.09
APPBP2-204ENST00000589341 UBTFP17480 764 aaKnown RBP34.37■■■■□ 3.09
APPBP2-204ENST00000589341 FGD5Q6ZNL6 1462 aa34.36■■■■□ 3.09
APPBP2-204ENST00000589341 PRXQ9BXM0 1461 aa34.36■■■■□ 3.09
APPBP2-204ENST00000589341 PDS5BQ9NTI5 1447 aa34.33■■■■□ 3.09
APPBP2-204ENST00000589341 TRIM26Q12899 539 aaPredicted RBP34.31■■■■□ 3.08
APPBP2-204ENST00000589341 PCGF6Q9BYE7 350 aa34.3■■■■□ 3.08
APPBP2-204ENST00000589341 RAPGEF2Q9Y4G8 1499 aa34.3■■■■□ 3.08
APPBP2-204ENST00000589341 TOPBP1Q92547 1522 aa34.28■■■■□ 3.08
APPBP2-204ENST00000589341 DNAJC5BQ9UF47 199 aa34.27■■■■□ 3.08
APPBP2-204ENST00000589341 CUX2O14529 1486 aa34.21■■■■□ 3.07
APPBP2-204ENST00000589341 POLA1P09884 1462 aaPredicted RBP34.14■■■■□ 3.06
APPBP2-204ENST00000589341 URB2Q14146 1524 aaKnown RBP34.13■■■■□ 3.05
APPBP2-204ENST00000589341 ABCA10Q8WWZ4 1543 aa34.13■■■■□ 3.05
APPBP2-204ENST00000589341 IGF1RP08069 1367 aa34.08■■■■□ 3.05
APPBP2-204ENST00000589341 CLIP1P30622 1438 aa34.08■■■■□ 3.05
APPBP2-204ENST00000589341 KIF21AQ7Z4S6 1674 aa34.08■■■■□ 3.05
APPBP2-204ENST00000589341 RAD54L2Q9Y4B4 1467 aa33.98■■■■□ 3.03
APPBP2-204ENST00000589341 WDR97A6NE52 1622 aa33.96■■■■□ 3.03
APPBP2-204ENST00000589341 CARMIL1Q5VZK9 1371 aa33.91■■■■□ 3.02
APPBP2-204ENST00000589341 VPS8Q8N3P4 1428 aa33.88■■■■□ 3.01
APPBP2-204ENST00000589341 MRC2Q9UBG0 1479 aa33.85■■■■□ 3.01
APPBP2-204ENST00000589341 CUL7Q14999 1698 aa33.83■■■■□ 3.01
APPBP2-204ENST00000589341 ABCA5Q8WWZ7 1642 aa33.8■■■■□ 3
APPBP2-204ENST00000589341 HRCP23327 699 aa33.78■■■■□ 3
APPBP2-204ENST00000589341 TARBP1Q13395 1621 aaKnown RBP33.75■■■□□ 2.99
APPBP2-204ENST00000589341 ARAP1Q96P48 1450 aa33.7■■■□□ 2.98
APPBP2-204ENST00000589341 WDR62O43379 1518 aa33.67■■■□□ 2.98
APPBP2-204ENST00000589341 GAPVD1Q14C86 1478 aa33.67■■■□□ 2.98
APPBP2-204ENST00000589341 PPARGC1BQ86YN6 1023 aaKnown RBP33.65■■■□□ 2.98
APPBP2-204ENST00000589341 ARHGAP35Q9NRY4 1499 aa33.61■■■□□ 2.97
APPBP2-204ENST00000589341 TDRD9Q8NDG6 1382 aaKnown RBP33.6■■■□□ 2.97
APPBP2-204ENST00000589341 IFT140Q96RY7 1462 aa33.53■■■□□ 2.96
APPBP2-204ENST00000589341 RANGAP1P46060 587 aaPredicted RBP33.53■■■□□ 2.96
APPBP2-204ENST00000589341 APLP2Q06481 763 aa33.5■■■□□ 2.95
APPBP2-204ENST00000589341 CTTNBP2Q8WZ74 1663 aa33.48■■■□□ 2.95
APPBP2-204ENST00000589341 ERCC6Q03468 1493 aa33.48■■■□□ 2.95
APPBP2-204ENST00000589341 PBRM1Q86U86 1689 aa33.45■■■□□ 2.95
APPBP2-204ENST00000589341 THOC2Q8NI27 1593 aaKnown RBP33.44■■■□□ 2.94
APPBP2-204ENST00000589341 EFCAB5A4FU69 1503 aa33.42■■■□□ 2.94
APPBP2-204ENST00000589341 GRIN2BQ13224 1484 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 5.8 ms