RNA–Protein interactions for RNA: ENST00000588984.5

APBA3-203, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 2

Gene APBA3, Length 1,779 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-203ENST00000588984 NISCHQ9Y2I1 1504 aa44.59■■■■■ 4.73
APBA3-203ENST00000588984 CCDC180Q9P1Z9 1646 aa39.85■■■■□ 3.97
APBA3-203ENST00000588984 ABCC9O60706 1549 aa39.65■■■■□ 3.94
APBA3-203ENST00000588984 RB1CC1Q8TDY2 1594 aa37.83■■■■□ 3.65
APBA3-203ENST00000588984 DCAF8L2P0C7V8 631 aa37.7■■■■□ 3.63
APBA3-203ENST00000588984 NACADO15069 1562 aa37.62■■■■□ 3.61
APBA3-203ENST00000588984 MYO15BQ96JP2 1530 aa37.14■■■■□ 3.54
APBA3-203ENST00000588984 ZCCHC6Q5VYS8 1495 aaKnown RBP37.04■■■■□ 3.52
APBA3-203ENST00000588984 PABPN1Q86U42 306 aaKnown RBP eCLIP37.01■■■■□ 3.51
APBA3-203ENST00000588984 UNC13AQ9UPW8 1703 aa36.99■■■■□ 3.51
APBA3-203ENST00000588984 DNAJC5BQ9UF47 199 aa36.92■■■■□ 3.5
APBA3-203ENST00000588984 DCAF1Q9Y4B6 1507 aa36.79■■■■□ 3.48
APBA3-203ENST00000588984 BICRAQ9NZM4 1560 aa36.69■■■■□ 3.46
APBA3-203ENST00000588984 SCRIBQ14160 1630 aa36.42■■■■□ 3.42
APBA3-203ENST00000588984 SHROOM4Q9ULL8 1493 aa36.16■■■■□ 3.38
APBA3-203ENST00000588984 CC2D2AQ9P2K1 1620 aa35.81■■■■□ 3.32
APBA3-203ENST00000588984 EIF4G1Q04637 1599 aaKnown RBP35.78■■■■□ 3.32
APBA3-203ENST00000588984 CECR2Q9BXF3 1484 aa35.67■■■■□ 3.3
APBA3-203ENST00000588984 SUPT5HO00267 1087 aaKnown RBP34.92■■■■□ 3.18
APBA3-203ENST00000588984 SMARCA4P51532 1647 aa34.73■■■■□ 3.15
APBA3-203ENST00000588984 NCAPD3P42695 1498 aa34.72■■■■□ 3.15
APBA3-203ENST00000588984 ATAD2BQ9ULI0 1458 aa34.68■■■■□ 3.14
APBA3-203ENST00000588984 SMARCA2P51531 1590 aa34.6■■■■□ 3.13
APBA3-203ENST00000588984 BAZ1AQ9NRL2 1556 aaPredicted RBP34.59■■■■□ 3.13
APBA3-203ENST00000588984 HMGXB3Q12766 1538 aa34.48■■■■□ 3.11
APBA3-203ENST00000588984 BAZ1BQ9UIG0 1483 aaKnown RBP34.39■■■■□ 3.1
APBA3-203ENST00000588984 MROH2BQ7Z745 1585 aa34.38■■■■□ 3.09
APBA3-203ENST00000588984 PEG3Q9GZU2 1588 aa34.33■■■■□ 3.09
APBA3-203ENST00000588984 ERCC6Q03468 1493 aa34.23■■■■□ 3.07
APBA3-203ENST00000588984 NESP48681 1621 aa34.14■■■■□ 3.06
APBA3-203ENST00000588984 WIZO95785 1651 aa34.01■■■■□ 3.04
APBA3-203ENST00000588984 RSF1Q96T23 1441 aaPredicted RBP34.01■■■■□ 3.03
APBA3-203ENST00000588984 CUX2O14529 1486 aa33.98■■■■□ 3.03
APBA3-203ENST00000588984 CHIC1Q5VXU3 224 aa33.96■■■■□ 3.03
APBA3-203ENST00000588984 LAMC3Q9Y6N6 1575 aa33.9■■■■□ 3.02
APBA3-203ENST00000588984 PDS5BQ9NTI5 1447 aa33.73■■■□□ 2.99
APBA3-203ENST00000588984 CADPSQ9ULU8 1353 aa33.72■■■□□ 2.99
APBA3-203ENST00000588984 KIF21AQ7Z4S6 1674 aa33.71■■■□□ 2.99
APBA3-203ENST00000588984 THOC2Q8NI27 1593 aaKnown RBP33.68■■■□□ 2.98
APBA3-203ENST00000588984 DNAJC5Q9H3Z4 198 aa33.66■■■□□ 2.98
APBA3-203ENST00000588984 TOP2AP11388 1531 aaKnown RBP33.57■■■□□ 2.96
APBA3-203ENST00000588984 MRC2Q9UBG0 1479 aa33.41■■■□□ 2.94
APBA3-203ENST00000588984 CFTRP13569 1480 aa33.37■■■□□ 2.93
APBA3-203ENST00000588984 CEP164Q9UPV0 1460 aa33.35■■■□□ 2.93
APBA3-203ENST00000588984 FANCD2Q9BXW9 1451 aa33.34■■■□□ 2.93
APBA3-203ENST00000588984 WDR62O43379 1518 aa33.29■■■□□ 2.92
APBA3-203ENST00000588984 CCDC88BA6NC98 1476 aa33.21■■■□□ 2.91
APBA3-203ENST00000588984 PRDM2Q13029 1718 aa33.08■■■□□ 2.89
APBA3-203ENST00000588984 URB2Q14146 1524 aaKnown RBP33.04■■■□□ 2.88
APBA3-203ENST00000588984 TRIM41Q8WV44 630 aa32.8■■■□□ 2.84
APBA3-203ENST00000588984 TOPBP1Q92547 1522 aa32.74■■■□□ 2.83
APBA3-203ENST00000588984 ABCC8Q09428 1581 aa32.67■■■□□ 2.82
APBA3-203ENST00000588984 IFT140Q96RY7 1462 aa32.66■■■□□ 2.82
APBA3-203ENST00000588984 DNMBPQ6XZF7 1577 aa32.64■■■□□ 2.82
APBA3-203ENST00000588984 LOC105371045A0A1W2PR82 267 aa32.63■■■□□ 2.81
APBA3-203ENST00000588984 ZNF608Q9ULD9 1512 aaPredicted RBP32.6■■■□□ 2.81
APBA3-203ENST00000588984 OSCARQ8IYS5 282 aa32.56■■■□□ 2.8
APBA3-203ENST00000588984 EIF4G3O43432 1585 aaKnown RBP32.42■■■□□ 2.78
APBA3-203ENST00000588984 POLA1P09884 1462 aaPredicted RBP32.42■■■□□ 2.78
APBA3-203ENST00000588984 TARBP1Q13395 1621 aaKnown RBP32.4■■■□□ 2.78
APBA3-203ENST00000588984 AQRO60306 1485 aaKnown RBP eCLIP32.37■■■□□ 2.77
APBA3-203ENST00000588984 RAD54L2Q9Y4B4 1467 aa32.34■■■□□ 2.77
APBA3-203ENST00000588984 SOGA1O94964 1423 aa32.31■■■□□ 2.76
APBA3-203ENST00000588984 CUX1P39880 1505 aa32.29■■■□□ 2.76
APBA3-203ENST00000588984 FGD5Q6ZNL6 1462 aa32.28■■■□□ 2.76
APBA3-203ENST00000588984 TDRD9Q8NDG6 1382 aaKnown RBP32.22■■■□□ 2.75
APBA3-203ENST00000588984 PCGF6Q9BYE7 350 aa32.22■■■□□ 2.75
APBA3-203ENST00000588984 FAM9AQ8IZU1 332 aaPredicted RBP32.19■■■□□ 2.74
APBA3-203ENST00000588984 FBLN2P98095 1184 aa32.18■■■□□ 2.74
APBA3-203ENST00000588984 CHD1O14646 1710 aa32.15■■■□□ 2.74
APBA3-203ENST00000588984 HRCP23327 699 aa32.14■■■□□ 2.74
APBA3-203ENST00000588984 RIMBP3CA6NJZ7 1639 aa32.07■■■□□ 2.72
APBA3-203ENST00000588984 RIMBP3BA6NNM3 1639 aa32.07■■■□□ 2.72
APBA3-203ENST00000588984 RIMBP3Q9UFD9 1639 aa32.07■■■□□ 2.72
APBA3-203ENST00000588984 WDR97A6NE52 1622 aa32.06■■■□□ 2.72
APBA3-203ENST00000588984 TRIM26Q12899 539 aaPredicted RBP32.03■■■□□ 2.72
APBA3-203ENST00000588984 SNAPC4Q5SXM2 1469 aa32.03■■■□□ 2.72
APBA3-203ENST00000588984 ARHGEF11O15085 1522 aa31.99■■■□□ 2.71
APBA3-203ENST00000588984 WRNQ14191 1432 aaPredicted RBP eCLIP31.98■■■□□ 2.71
APBA3-203ENST00000588984 EEA1Q15075 1411 aa31.98■■■□□ 2.71
APBA3-203ENST00000588984 GRIN2BQ13224 1484 aa31.97■■■□□ 2.71
APBA3-203ENST00000588984 CHMP7Q8WUX9 453 aaPredicted RBP31.94■■■□□ 2.7
APBA3-203ENST00000588984 MAGI1Q96QZ7 1491 aaPredicted RBP31.92■■■□□ 2.7
APBA3-203ENST00000588984 GAPVD1Q14C86 1478 aa31.91■■■□□ 2.7
APBA3-203ENST00000588984 SYNJ1O43426 1573 aa31.91■■■□□ 2.7
APBA3-203ENST00000588984 ABCA10Q8WWZ4 1543 aa31.9■■■□□ 2.7
APBA3-203ENST00000588984 PBRM1Q86U86 1689 aa31.88■■■□□ 2.69
APBA3-203ENST00000588984 TOP2BQ02880 1626 aa31.85■■■□□ 2.69
APBA3-203ENST00000588984 BIVM-ERCC5R4GMW8 1640 aa31.83■■■□□ 2.69
APBA3-203ENST00000588984 SYNJ2O15056 1496 aa31.82■■■□□ 2.68
APBA3-203ENST00000588984 CYB5RLQ6IPT4 315 aa31.82■■■□□ 2.68
APBA3-203ENST00000588984 ABCA5Q8WWZ7 1642 aa31.82■■■□□ 2.68
APBA3-203ENST00000588984 CLASP1Q7Z460 1538 aa31.73■■■□□ 2.67
APBA3-203ENST00000588984 ARAP1Q96P48 1450 aa31.7■■■□□ 2.66
APBA3-203ENST00000588984 EHMT2Q96KQ7 1210 aa31.67■■■□□ 2.66
APBA3-203ENST00000588984 TNIKQ9UKE5 1360 aa31.61■■■□□ 2.65
APBA3-203ENST00000588984 CSRNP3Q8WYN3 585 aa31.57■■■□□ 2.64
APBA3-203ENST00000588984 ADAMTS12P58397 1594 aa31.57■■■□□ 2.64
APBA3-203ENST00000588984 GOLGA3Q08378 1498 aa31.57■■■□□ 2.64
APBA3-203ENST00000588984 GRIN2AQ12879 1464 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms