RNA–Protein interactions for RNA: ENST00000588839.1

NFIC-205, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-205ENST00000588839 NISCHQ9Y2I1 1504 aa36.59■■■■□ 3.45
NFIC-205ENST00000588839 CCDC180Q9P1Z9 1646 aa32.86■■■□□ 2.85
NFIC-205ENST00000588839 ABCC9O60706 1549 aa32.52■■■□□ 2.8
NFIC-205ENST00000588839 RB1CC1Q8TDY2 1594 aa31.15■■■□□ 2.58
NFIC-205ENST00000588839 NACADO15069 1562 aa30.97■■■□□ 2.55
NFIC-205ENST00000588839 DCAF8L2P0C7V8 631 aa30.76■■■□□ 2.51
NFIC-205ENST00000588839 MYO15BQ96JP2 1530 aa30.62■■■□□ 2.49
NFIC-205ENST00000588839 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
NFIC-205ENST00000588839 AEBP2Q6ZN18 517 aaPredicted RBP30.44■■■□□ 2.46
NFIC-205ENST00000588839 ZCCHC6Q5VYS8 1495 aaKnown RBP30.38■■■□□ 2.45
NFIC-205ENST00000588839 DCAF1Q9Y4B6 1507 aa30.28■■■□□ 2.44
NFIC-205ENST00000588839 PABPN1Q86U42 306 aaKnown RBP eCLIP30.26■■■□□ 2.43
NFIC-205ENST00000588839 DNAJC5BQ9UF47 199 aa30.21■■■□□ 2.43
NFIC-205ENST00000588839 BICRAQ9NZM4 1560 aa30.14■■■□□ 2.42
NFIC-205ENST00000588839 SHROOM4Q9ULL8 1493 aa29.88■■■□□ 2.37
NFIC-205ENST00000588839 SCRIBQ14160 1630 aa29.88■■■□□ 2.37
NFIC-205ENST00000588839 CC2D2AQ9P2K1 1620 aa29.44■■■□□ 2.3
NFIC-205ENST00000588839 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
NFIC-205ENST00000588839 CHIC1Q5VXU3 224 aa29.33■■■□□ 2.29
NFIC-205ENST00000588839 CECR2Q9BXF3 1484 aa29.3■■■□□ 2.28
NFIC-205ENST00000588839 SMARCA4P51532 1647 aa28.54■■■□□ 2.16
NFIC-205ENST00000588839 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
NFIC-205ENST00000588839 SMARCA2P51531 1590 aa28.48■■■□□ 2.15
NFIC-205ENST00000588839 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
NFIC-205ENST00000588839 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.14
NFIC-205ENST00000588839 HMGXB3Q12766 1538 aa28.39■■■□□ 2.14
NFIC-205ENST00000588839 PEG3Q9GZU2 1588 aa28.26■■■□□ 2.11
NFIC-205ENST00000588839 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
NFIC-205ENST00000588839 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
NFIC-205ENST00000588839 ERCC6Q03468 1493 aa28.15■■■□□ 2.1
NFIC-205ENST00000588839 CUX2O14529 1486 aa28.02■■■□□ 2.08
NFIC-205ENST00000588839 NESP48681 1621 aa27.97■■■□□ 2.07
NFIC-205ENST00000588839 LAMC3Q9Y6N6 1575 aa27.93■■■□□ 2.06
NFIC-205ENST00000588839 WIZO95785 1651 aa27.87■■■□□ 2.05
NFIC-205ENST00000588839 PDS5BQ9NTI5 1447 aa27.73■■■□□ 2.03
NFIC-205ENST00000588839 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
NFIC-205ENST00000588839 KIF21AQ7Z4S6 1674 aa27.72■■■□□ 2.03
NFIC-205ENST00000588839 DNAJC5Q9H3Z4 198 aa27.68■■■□□ 2.02
NFIC-205ENST00000588839 CADPSQ9ULU8 1353 aa27.67■■■□□ 2.02
NFIC-205ENST00000588839 RSF1Q96T23 1441 aaPredicted RBP27.65■■■□□ 2.02
NFIC-205ENST00000588839 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
NFIC-205ENST00000588839 MRC2Q9UBG0 1479 aa27.47■■□□□ 1.99
NFIC-205ENST00000588839 CEP164Q9UPV0 1460 aa27.42■■□□□ 1.98
NFIC-205ENST00000588839 CFTRP13569 1480 aa27.4■■□□□ 1.98
NFIC-205ENST00000588839 WDR62O43379 1518 aa27.4■■□□□ 1.98
NFIC-205ENST00000588839 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
NFIC-205ENST00000588839 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
NFIC-205ENST00000588839 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
NFIC-205ENST00000588839 URB2Q14146 1524 aaKnown RBP27.11■■□□□ 1.93
NFIC-205ENST00000588839 ABCC8Q09428 1581 aa26.9■■□□□ 1.9
NFIC-205ENST00000588839 TOPBP1Q92547 1522 aa26.87■■□□□ 1.89
NFIC-205ENST00000588839 IFT140Q96RY7 1462 aa26.86■■□□□ 1.89
NFIC-205ENST00000588839 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
NFIC-205ENST00000588839 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
NFIC-205ENST00000588839 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
NFIC-205ENST00000588839 EIF4G3O43432 1585 aaKnown RBP26.67■■□□□ 1.86
NFIC-205ENST00000588839 TARBP1Q13395 1621 aaKnown RBP26.63■■□□□ 1.85
NFIC-205ENST00000588839 POLA1P09884 1462 aaPredicted RBP26.61■■□□□ 1.85
NFIC-205ENST00000588839 SUPT5HO00267 1087 aaKnown RBP26.56■■□□□ 1.84
NFIC-205ENST00000588839 TRIM41Q8WV44 630 aa26.56■■□□□ 1.84
NFIC-205ENST00000588839 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.834e-6■■□□□ 12.3
NFIC-205ENST00000588839 SOGA1O94964 1423 aa26.48■■□□□ 1.83
NFIC-205ENST00000588839 FGD5Q6ZNL6 1462 aa26.48■■□□□ 1.83
NFIC-205ENST00000588839 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
NFIC-205ENST00000588839 CUX1P39880 1505 aa26.46■■□□□ 1.83
NFIC-205ENST00000588839 RAD54L2Q9Y4B4 1467 aa26.46■■□□□ 1.83
NFIC-205ENST00000588839 CHD1O14646 1710 aa26.45■■□□□ 1.83
NFIC-205ENST00000588839 RIMBP3CA6NJZ7 1639 aa26.39■■□□□ 1.82
NFIC-205ENST00000588839 RIMBP3BA6NNM3 1639 aa26.39■■□□□ 1.82
NFIC-205ENST00000588839 RIMBP3Q9UFD9 1639 aa26.39■■□□□ 1.82
NFIC-205ENST00000588839 TDRD9Q8NDG6 1382 aaKnown RBP26.37■■□□□ 1.81
NFIC-205ENST00000588839 FBLN2P98095 1184 aa26.32■■□□□ 1.8
NFIC-205ENST00000588839 ARHGEF11O15085 1522 aa26.31■■□□□ 1.8
NFIC-205ENST00000588839 SNAPC4Q5SXM2 1469 aa26.29■■□□□ 1.8
NFIC-205ENST00000588839 GRIN2BQ13224 1484 aa26.27■■□□□ 1.8
NFIC-205ENST00000588839 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
NFIC-205ENST00000588839 PBRM1Q86U86 1689 aa26.24■■□□□ 1.79
NFIC-205ENST00000588839 ABCA10Q8WWZ4 1543 aa26.2■■□□□ 1.79
NFIC-205ENST00000588839 GAPVD1Q14C86 1478 aa26.19■■□□□ 1.78
NFIC-205ENST00000588839 CHMP7Q8WUX9 453 aaPredicted RBP26.18■■□□□ 1.78
NFIC-205ENST00000588839 SYNJ1O43426 1573 aa26.17■■□□□ 1.78
NFIC-205ENST00000588839 ABCA5Q8WWZ7 1642 aa26.17■■□□□ 1.78
NFIC-205ENST00000588839 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
NFIC-205ENST00000588839 SYNJ2O15056 1496 aa26.16■■□□□ 1.78
NFIC-205ENST00000588839 TOP2BQ02880 1626 aa26.15■■□□□ 1.78
NFIC-205ENST00000588839 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.77
NFIC-205ENST00000588839 CLASP1Q7Z460 1538 aa26.1■■□□□ 1.77
NFIC-205ENST00000588839 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
NFIC-205ENST00000588839 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
NFIC-205ENST00000588839 ADAMTS12P58397 1594 aa25.95■■□□□ 1.75
NFIC-205ENST00000588839 GRIN2AQ12879 1464 aa25.91■■□□□ 1.74
NFIC-205ENST00000588839 ERICH3Q5RHP9 1530 aa25.91■■□□□ 1.74
NFIC-205ENST00000588839 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
NFIC-205ENST00000588839 SENP3Q9H4L4 574 aaPredicted RBP25.87■■□□□ 1.73
NFIC-205ENST00000588839 CEP170Q5SW79 1584 aa25.81■■□□□ 1.72
NFIC-205ENST00000588839 NUP160Q12769 1436 aa25.8■■□□□ 1.72
NFIC-205ENST00000588839 PHF23Q9BUL5 403 aaPredicted RBP25.76■■□□□ 1.71
NFIC-205ENST00000588839 TRHP20396 242 aaPredicted RBP25.74■■□□□ 1.71
NFIC-205ENST00000588839 SHROOM2Q13796 1616 aa25.71■■□□□ 1.71
NFIC-205ENST00000588839 ERCC6L2Q5T890 1561 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms