RNA–Protein interactions for RNA: ENST00000588223.5

LINC00663-204, long intergenic non-protein coding RNA 663, humanhuman

TSL 4 BASIC

Gene LINC00663, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00663-204ENST00000588223 NISCHQ9Y2I1 1504 aa23.57■■□□□ 1.36
LINC00663-204ENST00000588223 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.88
LINC00663-204ENST00000588223 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
LINC00663-204ENST00000588223 DCAF1Q9Y4B6 1507 aa19.55■□□□□ 0.72
LINC00663-204ENST00000588223 DCAF8L2P0C7V8 631 aa19.42■□□□□ 0.7
LINC00663-204ENST00000588223 MYO15BQ96JP2 1530 aa19.28■□□□□ 0.68
LINC00663-204ENST00000588223 SHROOM4Q9ULL8 1493 aa19.26■□□□□ 0.67
LINC00663-204ENST00000588223 ABCC9O60706 1549 aa19.21■□□□□ 0.67
LINC00663-204ENST00000588223 NACADO15069 1562 aa19.1■□□□□ 0.65
LINC00663-204ENST00000588223 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.62
LINC00663-204ENST00000588223 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
LINC00663-204ENST00000588223 SUPT5HO00267 1087 aaKnown RBP18.65■□□□□ 0.58
LINC00663-204ENST00000588223 UNC13AQ9UPW8 1703 aa18.39■□□□□ 0.53
LINC00663-204ENST00000588223 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
LINC00663-204ENST00000588223 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
LINC00663-204ENST00000588223 CECR2Q9BXF3 1484 aa18.24■□□□□ 0.51
LINC00663-204ENST00000588223 BAZ1AQ9NRL2 1556 aaPredicted RBP18.23■□□□□ 0.51
LINC00663-204ENST00000588223 BICRAQ9NZM4 1560 aa18.21■□□□□ 0.51
LINC00663-204ENST00000588223 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
LINC00663-204ENST00000588223 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.49
LINC00663-204ENST00000588223 SMARCA4P51532 1647 aa18.08■□□□□ 0.48
LINC00663-204ENST00000588223 WIZO95785 1651 aa18.01■□□□□ 0.47
LINC00663-204ENST00000588223 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
LINC00663-204ENST00000588223 TOP2AP11388 1531 aaKnown RBP17.91■□□□□ 0.46
LINC00663-204ENST00000588223 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
LINC00663-204ENST00000588223 SMARCA2P51531 1590 aa17.8■□□□□ 0.44
LINC00663-204ENST00000588223 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
LINC00663-204ENST00000588223 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
LINC00663-204ENST00000588223 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
LINC00663-204ENST00000588223 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
LINC00663-204ENST00000588223 NCAPD3P42695 1498 aa17.61■□□□□ 0.41
LINC00663-204ENST00000588223 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
LINC00663-204ENST00000588223 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
LINC00663-204ENST00000588223 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
LINC00663-204ENST00000588223 ABCC8Q09428 1581 aa17.32■□□□□ 0.36
LINC00663-204ENST00000588223 WRNQ14191 1432 aaPredicted RBP eCLIP17.28■□□□□ 0.36
LINC00663-204ENST00000588223 CFTRP13569 1480 aa17.24■□□□□ 0.35
LINC00663-204ENST00000588223 LOC105371045A0A1W2PR82 267 aa17.2■□□□□ 0.34
LINC00663-204ENST00000588223 FAM9AQ8IZU1 332 aaPredicted RBP17.2■□□□□ 0.34
LINC00663-204ENST00000588223 EEA1Q15075 1411 aa17.2■□□□□ 0.34
LINC00663-204ENST00000588223 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
LINC00663-204ENST00000588223 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
LINC00663-204ENST00000588223 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
LINC00663-204ENST00000588223 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
LINC00663-204ENST00000588223 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
LINC00663-204ENST00000588223 SOGA1O94964 1423 aa17.04■□□□□ 0.32
LINC00663-204ENST00000588223 DNAJC5Q9H3Z4 198 aa17.04■□□□□ 0.32
LINC00663-204ENST00000588223 CSRNP3Q8WYN3 585 aa17.03■□□□□ 0.32
LINC00663-204ENST00000588223 LAMC3Q9Y6N6 1575 aa16.99■□□□□ 0.31
LINC00663-204ENST00000588223 CUX1P39880 1505 aa16.99■□□□□ 0.31
LINC00663-204ENST00000588223 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
LINC00663-204ENST00000588223 RUSC2Q8N2Y8 1516 aa16.93■□□□□ 0.3
LINC00663-204ENST00000588223 GOLGA3Q08378 1498 aa16.91■□□□□ 0.3
LINC00663-204ENST00000588223 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
LINC00663-204ENST00000588223 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
LINC00663-204ENST00000588223 EHMT2Q96KQ7 1210 aa16.89■□□□□ 0.29
LINC00663-204ENST00000588223 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.29
LINC00663-204ENST00000588223 KIF21BO75037 1637 aa16.88■□□□□ 0.29
LINC00663-204ENST00000588223 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
LINC00663-204ENST00000588223 NESP48681 1621 aa16.87■□□□□ 0.29
LINC00663-204ENST00000588223 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
LINC00663-204ENST00000588223 UBTFP17480 764 aaKnown RBP16.82■□□□□ 0.28
LINC00663-204ENST00000588223 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
LINC00663-204ENST00000588223 TOPBP1Q92547 1522 aa16.78■□□□□ 0.28
LINC00663-204ENST00000588223 ERICH3Q5RHP9 1530 aa16.76■□□□□ 0.27
LINC00663-204ENST00000588223 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
LINC00663-204ENST00000588223 CUX2O14529 1486 aa16.74■□□□□ 0.27
LINC00663-204ENST00000588223 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
LINC00663-204ENST00000588223 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
LINC00663-204ENST00000588223 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
LINC00663-204ENST00000588223 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
LINC00663-204ENST00000588223 ABCA10Q8WWZ4 1543 aa16.69■□□□□ 0.26
LINC00663-204ENST00000588223 KIF21AQ7Z4S6 1674 aa16.68■□□□□ 0.26
LINC00663-204ENST00000588223 TRIM26Q12899 539 aaPredicted RBP16.66■□□□□ 0.26
LINC00663-204ENST00000588223 IGF1RP08069 1367 aa16.64■□□□□ 0.26
LINC00663-204ENST00000588223 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
LINC00663-204ENST00000588223 CLIP1P30622 1438 aa16.62■□□□□ 0.25
LINC00663-204ENST00000588223 RAD54L2Q9Y4B4 1467 aa16.62■□□□□ 0.25
LINC00663-204ENST00000588223 PCGF6Q9BYE7 350 aa16.61■□□□□ 0.25
LINC00663-204ENST00000588223 CARMIL1Q5VZK9 1371 aa16.6■□□□□ 0.25
LINC00663-204ENST00000588223 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
LINC00663-204ENST00000588223 CUL7Q14999 1698 aa16.55■□□□□ 0.24
LINC00663-204ENST00000588223 ERCC6Q03468 1493 aa16.53■□□□□ 0.24
LINC00663-204ENST00000588223 WDR62O43379 1518 aa16.51■□□□□ 0.23
LINC00663-204ENST00000588223 ABCA5Q8WWZ7 1642 aa16.51■□□□□ 0.23
LINC00663-204ENST00000588223 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
LINC00663-204ENST00000588223 GAPVD1Q14C86 1478 aa16.5■□□□□ 0.23
LINC00663-204ENST00000588223 TARBP1Q13395 1621 aaKnown RBP16.49■□□□□ 0.23
LINC00663-204ENST00000588223 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
LINC00663-204ENST00000588223 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
LINC00663-204ENST00000588223 APLP2Q06481 763 aa16.45■□□□□ 0.22
LINC00663-204ENST00000588223 RANGAP1P46060 587 aaPredicted RBP16.42■□□□□ 0.22
LINC00663-204ENST00000588223 ARAP1Q96P48 1450 aa16.39■□□□□ 0.21
LINC00663-204ENST00000588223 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
LINC00663-204ENST00000588223 GRIN2BQ13224 1484 aa16.37■□□□□ 0.21
LINC00663-204ENST00000588223 ARHGAP35Q9NRY4 1499 aa16.37■□□□□ 0.21
LINC00663-204ENST00000588223 PPARGC1BQ86YN6 1023 aaKnown RBP16.36■□□□□ 0.21
LINC00663-204ENST00000588223 PBRM1Q86U86 1689 aa16.36■□□□□ 0.21
LINC00663-204ENST00000588223 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
LINC00663-204ENST00000588223 CTTNBP2Q8WZ74 1663 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms