RNA–Protein interactions for RNA: ENST00000587204.1

TUBB6-206, Transcript of tubulin beta 6 class V, humanhuman

TSL 2

Gene TUBB6, Length 408 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-206ENST00000587204 NISCHQ9Y2I1 1504 aa35.23■■■■□ 3.23
TUBB6-206ENST00000587204 ABCC9O60706 1549 aa31.49■■■□□ 2.63
TUBB6-206ENST00000587204 CCDC180Q9P1Z9 1646 aa31.48■■■□□ 2.63
TUBB6-206ENST00000587204 AEBP2Q6ZN18 517 aaPredicted RBP31.03■■■□□ 2.56
TUBB6-206ENST00000587204 RB1CC1Q8TDY2 1594 aa29.92■■■□□ 2.38
TUBB6-206ENST00000587204 DCAF8L2P0C7V8 631 aa29.84■■■□□ 2.37
TUBB6-206ENST00000587204 NACADO15069 1562 aa29.73■■■□□ 2.35
TUBB6-206ENST00000587204 CHIC1Q5VXU3 224 aa29.5■■■□□ 2.31
TUBB6-206ENST00000587204 DNAJC5BQ9UF47 199 aa29.39■■■□□ 2.3
TUBB6-206ENST00000587204 PABPN1Q86U42 306 aaKnown RBP eCLIP29.38■■■□□ 2.29
TUBB6-206ENST00000587204 MYO15BQ96JP2 1530 aa29.3■■■□□ 2.28
TUBB6-206ENST00000587204 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
TUBB6-206ENST00000587204 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
TUBB6-206ENST00000587204 BICRAQ9NZM4 1560 aa29.08■■■□□ 2.25
TUBB6-206ENST00000587204 DCAF1Q9Y4B6 1507 aa29.01■■■□□ 2.23
TUBB6-206ENST00000587204 SCRIBQ14160 1630 aa28.85■■■□□ 2.21
TUBB6-206ENST00000587204 SHROOM4Q9ULL8 1493 aa28.58■■■□□ 2.17
TUBB6-206ENST00000587204 CC2D2AQ9P2K1 1620 aa28.39■■■□□ 2.13
TUBB6-206ENST00000587204 EIF4G1Q04637 1599 aaKnown RBP28.35■■■□□ 2.13
TUBB6-206ENST00000587204 CECR2Q9BXF3 1484 aa28.3■■■□□ 2.12
TUBB6-206ENST00000587204 SMARCA4P51532 1647 aa27.46■■□□□ 1.99
TUBB6-206ENST00000587204 NCAPD3P42695 1498 aa27.45■■□□□ 1.99
TUBB6-206ENST00000587204 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
TUBB6-206ENST00000587204 SMARCA2P51531 1590 aa27.34■■□□□ 1.97
TUBB6-206ENST00000587204 BAZ1AQ9NRL2 1556 aaPredicted RBP27.32■■□□□ 1.96
TUBB6-206ENST00000587204 HMGXB3Q12766 1538 aa27.26■■□□□ 1.96
TUBB6-206ENST00000587204 BAZ1BQ9UIG0 1483 aaKnown RBP27.21■■□□□ 1.95
TUBB6-206ENST00000587204 MROH2BQ7Z745 1585 aa27.2■■□□□ 1.94
TUBB6-206ENST00000587204 ERCC6Q03468 1493 aa27.15■■□□□ 1.94
TUBB6-206ENST00000587204 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
TUBB6-206ENST00000587204 NESP48681 1621 aa27.09■■□□□ 1.93
TUBB6-206ENST00000587204 CUX2O14529 1486 aa26.94■■□□□ 1.9
TUBB6-206ENST00000587204 WIZO95785 1651 aa26.89■■□□□ 1.9
TUBB6-206ENST00000587204 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
TUBB6-206ENST00000587204 DNAJC5Q9H3Z4 198 aa26.79■■□□□ 1.88
TUBB6-206ENST00000587204 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
TUBB6-206ENST00000587204 KIF21AQ7Z4S6 1674 aa26.71■■□□□ 1.87
TUBB6-206ENST00000587204 RSF1Q96T23 1441 aaPredicted RBP26.68■■□□□ 1.86
TUBB6-206ENST00000587204 PDS5BQ9NTI5 1447 aa26.67■■□□□ 1.86
TUBB6-206ENST00000587204 CADPSQ9ULU8 1353 aa26.67■■□□□ 1.86
TUBB6-206ENST00000587204 TOP2AP11388 1531 aaKnown RBP26.51■■□□□ 1.83
TUBB6-206ENST00000587204 MRC2Q9UBG0 1479 aa26.47■■□□□ 1.83
TUBB6-206ENST00000587204 SENP3Q9H4L4 574 aaPredicted RBP26.4■■□□□ 1.82
TUBB6-206ENST00000587204 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
TUBB6-206ENST00000587204 FANCD2Q9BXW9 1451 aa26.39■■□□□ 1.82
TUBB6-206ENST00000587204 CFTRP13569 1480 aa26.38■■□□□ 1.81
TUBB6-206ENST00000587204 WDR62O43379 1518 aa26.37■■□□□ 1.81
TUBB6-206ENST00000587204 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
TUBB6-206ENST00000587204 URB2Q14146 1524 aaKnown RBP26.18■■□□□ 1.78
TUBB6-206ENST00000587204 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
TUBB6-206ENST00000587204 PHF23Q9BUL5 403 aaPredicted RBP26.08■■□□□ 1.77
TUBB6-206ENST00000587204 TOPBP1Q92547 1522 aa25.91■■□□□ 1.74
TUBB6-206ENST00000587204 ZNF608Q9ULD9 1512 aaPredicted RBP25.86■■□□□ 1.73
TUBB6-206ENST00000587204 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
TUBB6-206ENST00000587204 TRIM41Q8WV44 630 aa25.82■■□□□ 1.72
TUBB6-206ENST00000587204 DNMBPQ6XZF7 1577 aa25.81■■□□□ 1.72
TUBB6-206ENST00000587204 OSCARQ8IYS5 282 aa25.8■■□□□ 1.72
TUBB6-206ENST00000587204 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
TUBB6-206ENST00000587204 SUPT5HO00267 1087 aaKnown RBP25.75■■□□□ 1.71
TUBB6-206ENST00000587204 EIF4G3O43432 1585 aaKnown RBP25.68■■□□□ 1.7
TUBB6-206ENST00000587204 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
TUBB6-206ENST00000587204 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.72e-6■■■□□ 15.6
TUBB6-206ENST00000587204 TARBP1Q13395 1621 aaKnown RBP25.64■■□□□ 1.7
TUBB6-206ENST00000587204 RAD54L2Q9Y4B4 1467 aa25.61■■□□□ 1.69
TUBB6-206ENST00000587204 SOGA1O94964 1423 aa25.54■■□□□ 1.68
TUBB6-206ENST00000587204 CUX1P39880 1505 aa25.54■■□□□ 1.68
TUBB6-206ENST00000587204 FGD5Q6ZNL6 1462 aa25.53■■□□□ 1.68
TUBB6-206ENST00000587204 TDRD9Q8NDG6 1382 aaKnown RBP25.53■■□□□ 1.68
TUBB6-206ENST00000587204 FBLN2P98095 1184 aa25.5■■□□□ 1.67
TUBB6-206ENST00000587204 CHD1O14646 1710 aa25.48■■□□□ 1.67
TUBB6-206ENST00000587204 RIMBP3CA6NJZ7 1639 aa25.46■■□□□ 1.67
TUBB6-206ENST00000587204 RIMBP3BA6NNM3 1639 aa25.46■■□□□ 1.67
TUBB6-206ENST00000587204 RIMBP3Q9UFD9 1639 aa25.46■■□□□ 1.67
TUBB6-206ENST00000587204 ARHGEF11O15085 1522 aa25.39■■□□□ 1.66
TUBB6-206ENST00000587204 SNAPC4Q5SXM2 1469 aa25.38■■□□□ 1.65
TUBB6-206ENST00000587204 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
TUBB6-206ENST00000587204 GRIN2BQ13224 1484 aa25.28■■□□□ 1.64
TUBB6-206ENST00000587204 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
TUBB6-206ENST00000587204 CYB5RLQ6IPT4 315 aa25.25■■□□□ 1.63
TUBB6-206ENST00000587204 MAGI1Q96QZ7 1491 aaPredicted RBP25.24■■□□□ 1.63
TUBB6-206ENST00000587204 GAPVD1Q14C86 1478 aa25.23■■□□□ 1.63
TUBB6-206ENST00000587204 PBRM1Q86U86 1689 aa25.21■■□□□ 1.63
TUBB6-206ENST00000587204 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
TUBB6-206ENST00000587204 SYNJ2O15056 1496 aa25.18■■□□□ 1.62
TUBB6-206ENST00000587204 ARAP1Q96P48 1450 aa25.17■■□□□ 1.62
TUBB6-206ENST00000587204 WRNQ14191 1432 aaPredicted RBP eCLIP25.17■■□□□ 1.62
TUBB6-206ENST00000587204 SYNJ1O43426 1573 aa25.17■■□□□ 1.62
TUBB6-206ENST00000587204 ABCA5Q8WWZ7 1642 aa25.16■■□□□ 1.62
TUBB6-206ENST00000587204 CLASP1Q7Z460 1538 aa25.14■■□□□ 1.62
TUBB6-206ENST00000587204 TOP2BQ02880 1626 aa25.13■■□□□ 1.61
TUBB6-206ENST00000587204 BIVM-ERCC5R4GMW8 1640 aa25.12■■□□□ 1.61
TUBB6-206ENST00000587204 ADAMTS12P58397 1594 aa24.99■■□□□ 1.59
TUBB6-206ENST00000587204 GRIN2AQ12879 1464 aa24.96■■□□□ 1.59
TUBB6-206ENST00000587204 TRHP20396 242 aaPredicted RBP24.94■■□□□ 1.58
TUBB6-206ENST00000587204 FHAD1B1AJZ9 1412 aa24.9■■□□□ 1.58
TUBB6-206ENST00000587204 CEP170Q5SW79 1584 aa24.89■■□□□ 1.58
TUBB6-206ENST00000587204 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
TUBB6-206ENST00000587204 NUP160Q12769 1436 aa24.86■■□□□ 1.57
TUBB6-206ENST00000587204 ERCC6L2Q5T890 1561 aa24.85■■□□□ 1.57
TUBB6-206ENST00000587204 SHROOM2Q13796 1616 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms