RNA–Protein interactions for RNA: ENST00000587074.1

CELF4-205, Transcript of CUGBP Elav-like family member 4, humanhuman

TSL 3

Gene CELF4, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-205ENST00000587074 NISCHQ9Y2I1 1504 aa24.69■■□□□ 1.54
CELF4-205ENST00000587074 CCDC180Q9P1Z9 1646 aa22.08■■□□□ 1.13
CELF4-205ENST00000587074 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
CELF4-205ENST00000587074 AEBP2Q6ZN18 517 aaPredicted RBP21.74■■□□□ 1.07
CELF4-205ENST00000587074 ABCC9O60706 1549 aa21.64■■□□□ 1.05
CELF4-205ENST00000587074 RB1CC1Q8TDY2 1594 aa20.8■□□□□ 0.92
CELF4-205ENST00000587074 NACADO15069 1562 aa20.74■□□□□ 0.91
CELF4-205ENST00000587074 MYO15BQ96JP2 1530 aa20.58■□□□□ 0.89
CELF4-205ENST00000587074 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
CELF4-205ENST00000587074 DCAF8L2P0C7V8 631 aa20.52■□□□□ 0.88
CELF4-205ENST00000587074 DCAF1Q9Y4B6 1507 aa20.45■□□□□ 0.86
CELF4-205ENST00000587074 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
CELF4-205ENST00000587074 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
CELF4-205ENST00000587074 PABPN1Q86U42 306 aaKnown RBP eCLIP20.14■□□□□ 0.81
CELF4-205ENST00000587074 SCRIBQ14160 1630 aa20.08■□□□□ 0.8
CELF4-205ENST00000587074 SHROOM4Q9ULL8 1493 aa19.98■□□□□ 0.79
CELF4-205ENST00000587074 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
CELF4-205ENST00000587074 EIF4G1Q04637 1599 aaKnown RBP19.66■□□□□ 0.74
CELF4-205ENST00000587074 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
CELF4-205ENST00000587074 CECR2Q9BXF3 1484 aa19.47■□□□□ 0.71
CELF4-205ENST00000587074 SMARCA4P51532 1647 aa19.22■□□□□ 0.67
CELF4-205ENST00000587074 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
CELF4-205ENST00000587074 NCAPD3P42695 1498 aa19.11■□□□□ 0.65
CELF4-205ENST00000587074 ATAD2BQ9ULI0 1458 aa19.1■□□□□ 0.65
CELF4-205ENST00000587074 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
CELF4-205ENST00000587074 SMARCA2P51531 1590 aa19.09■□□□□ 0.65
CELF4-205ENST00000587074 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
CELF4-205ENST00000587074 PEG3Q9GZU2 1588 aa19.05■□□□□ 0.64
CELF4-205ENST00000587074 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.64
CELF4-205ENST00000587074 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
CELF4-205ENST00000587074 WIZO95785 1651 aa18.83■□□□□ 0.61
CELF4-205ENST00000587074 RSF1Q96T23 1441 aaPredicted RBP18.73■□□□□ 0.59
CELF4-205ENST00000587074 NESP48681 1621 aa18.71■□□□□ 0.58
CELF4-205ENST00000587074 LAMC3Q9Y6N6 1575 aa18.66■□□□□ 0.58
CELF4-205ENST00000587074 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
CELF4-205ENST00000587074 TOP2AP11388 1531 aaKnown RBP18.62■□□□□ 0.57
CELF4-205ENST00000587074 KIF21AQ7Z4S6 1674 aa18.54■□□□□ 0.56
CELF4-205ENST00000587074 CUX2O14529 1486 aa18.54■□□□□ 0.56
CELF4-205ENST00000587074 CADPSQ9ULU8 1353 aa18.53■□□□□ 0.56
CELF4-205ENST00000587074 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
CELF4-205ENST00000587074 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
CELF4-205ENST00000587074 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
CELF4-205ENST00000587074 CFTRP13569 1480 aa18.41■□□□□ 0.54
CELF4-205ENST00000587074 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
CELF4-205ENST00000587074 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
CELF4-205ENST00000587074 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.53
CELF4-205ENST00000587074 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.52
CELF4-205ENST00000587074 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.52
CELF4-205ENST00000587074 WDR62O43379 1518 aa18.32■□□□□ 0.52
CELF4-205ENST00000587074 URB2Q14146 1524 aaKnown RBP18.18■□□□□ 0.5
CELF4-205ENST00000587074 DNAJC5Q9H3Z4 198 aa18.08■□□□□ 0.48
CELF4-205ENST00000587074 SUPT5HO00267 1087 aaKnown RBP18.05■□□□□ 0.48
CELF4-205ENST00000587074 TOPBP1Q92547 1522 aa18.04■□□□□ 0.48
CELF4-205ENST00000587074 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
CELF4-205ENST00000587074 ABCC8Q09428 1581 aa18■□□□□ 0.47
CELF4-205ENST00000587074 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
CELF4-205ENST00000587074 PLPPR3Q6T4P5 718 aa17.91■□□□□ 0.46
CELF4-205ENST00000587074 TARBP1Q13395 1621 aaKnown RBP17.89■□□□□ 0.45
CELF4-205ENST00000587074 ZNF608Q9ULD9 1512 aaPredicted RBP17.88■□□□□ 0.45
CELF4-205ENST00000587074 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
CELF4-205ENST00000587074 CUX1P39880 1505 aa17.86■□□□□ 0.45
CELF4-205ENST00000587074 EIF4G3O43432 1585 aaKnown RBP17.86■□□□□ 0.45
CELF4-205ENST00000587074 FGD5Q6ZNL6 1462 aa17.81■□□□□ 0.44
CELF4-205ENST00000587074 RAD54L2Q9Y4B4 1467 aa17.78■□□□□ 0.44
CELF4-205ENST00000587074 SOGA1O94964 1423 aa17.75■□□□□ 0.43
CELF4-205ENST00000587074 WDR97A6NE52 1622 aa17.75■□□□□ 0.43
CELF4-205ENST00000587074 AQRO60306 1485 aaKnown RBP eCLIP17.74■□□□□ 0.43
CELF4-205ENST00000587074 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
CELF4-205ENST00000587074 TOP2BQ02880 1626 aa17.69■□□□□ 0.42
CELF4-205ENST00000587074 CHD1O14646 1710 aa17.67■□□□□ 0.42
CELF4-205ENST00000587074 SYNJ1O43426 1573 aa17.67■□□□□ 0.42
CELF4-205ENST00000587074 TDRD9Q8NDG6 1382 aaKnown RBP17.66■□□□□ 0.42
CELF4-205ENST00000587074 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
CELF4-205ENST00000587074 WRNQ14191 1432 aaPredicted RBP eCLIP17.65■□□□□ 0.42
CELF4-205ENST00000587074 ABCA10Q8WWZ4 1543 aa17.64■□□□□ 0.41
CELF4-205ENST00000587074 ABCA5Q8WWZ7 1642 aa17.62■□□□□ 0.41
CELF4-205ENST00000587074 PBRM1Q86U86 1689 aa17.62■□□□□ 0.41
CELF4-205ENST00000587074 SNAPC4Q5SXM2 1469 aa17.6■□□□□ 0.41
CELF4-205ENST00000587074 GRIN2BQ13224 1484 aa17.59■□□□□ 0.41
CELF4-205ENST00000587074 MAGI1Q96QZ7 1491 aaPredicted RBP17.57■□□□□ 0.4
CELF4-205ENST00000587074 GAPVD1Q14C86 1478 aa17.56■□□□□ 0.4
CELF4-205ENST00000587074 RIMBP3CA6NJZ7 1639 aa17.5■□□□□ 0.39
CELF4-205ENST00000587074 RIMBP3BA6NNM3 1639 aa17.5■□□□□ 0.39
CELF4-205ENST00000587074 RIMBP3Q9UFD9 1639 aa17.5■□□□□ 0.39
CELF4-205ENST00000587074 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
CELF4-205ENST00000587074 FBLN2P98095 1184 aa17.48■□□□□ 0.39
CELF4-205ENST00000587074 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
CELF4-205ENST00000587074 CLASP1Q7Z460 1538 aa17.46■□□□□ 0.39
CELF4-205ENST00000587074 ADAMTS12P58397 1594 aa17.45■□□□□ 0.38
CELF4-205ENST00000587074 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
CELF4-205ENST00000587074 CHMP7Q8WUX9 453 aaPredicted RBP17.42■□□□□ 0.38
CELF4-205ENST00000587074 GRIN2AQ12879 1464 aa17.38■□□□□ 0.37
CELF4-205ENST00000587074 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
CELF4-205ENST00000587074 FHAD1B1AJZ9 1412 aa17.36■□□□□ 0.37
CELF4-205ENST00000587074 CEP170Q5SW79 1584 aa17.32■□□□□ 0.36
CELF4-205ENST00000587074 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
CELF4-205ENST00000587074 NUP160Q12769 1436 aa17.31■□□□□ 0.36
CELF4-205ENST00000587074 KIF27Q86VH2 1401 aa17.29■□□□□ 0.36
CELF4-205ENST00000587074 CUL7Q14999 1698 aa17.26■□□□□ 0.35
CELF4-205ENST00000587074 SHROOM2Q13796 1616 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms