RNA–Protein interactions for RNA: ENST00000586663.1

PEX12-203, Transcript of peroxisomal biogenesis factor 12, humanhuman

TSL 1 (best)

Gene PEX12, Length 1,607 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX12-203ENST00000586663 NISCHQ9Y2I1 1504 aa46.02■■■■■ 4.96
PEX12-203ENST00000586663 CCDC180Q9P1Z9 1646 aa40.1■■■■■ 4.01
PEX12-203ENST00000586663 ZCCHC6Q5VYS8 1495 aaKnown RBP38.75■■■■□ 3.79
PEX12-203ENST00000586663 DCAF1Q9Y4B6 1507 aa38.14■■■■□ 3.7
PEX12-203ENST00000586663 DCAF8L2P0C7V8 631 aa37.79■■■■□ 3.64
PEX12-203ENST00000586663 SHROOM4Q9ULL8 1493 aa37.62■■■■□ 3.61
PEX12-203ENST00000586663 MYO15BQ96JP2 1530 aa37.6■■■■□ 3.61
PEX12-203ENST00000586663 ABCC9O60706 1549 aa37.49■■■■□ 3.59
PEX12-203ENST00000586663 NACADO15069 1562 aa37.25■■■■□ 3.55
PEX12-203ENST00000586663 RB1CC1Q8TDY2 1594 aa36.85■■■■□ 3.49
PEX12-203ENST00000586663 SCRIBQ14160 1630 aa36.8■■■■□ 3.48
PEX12-203ENST00000586663 SUPT5HO00267 1087 aaKnown RBP36.37■■■■□ 3.41
PEX12-203ENST00000586663 UNC13AQ9UPW8 1703 aa36.06■■■■□ 3.36
PEX12-203ENST00000586663 RSF1Q96T23 1441 aaPredicted RBP35.78■■■■□ 3.32
PEX12-203ENST00000586663 CECR2Q9BXF3 1484 aa35.65■■■■□ 3.3
PEX12-203ENST00000586663 BICRAQ9NZM4 1560 aa35.65■■■■□ 3.3
PEX12-203ENST00000586663 BAZ1AQ9NRL2 1556 aaPredicted RBP35.57■■■■□ 3.28
PEX12-203ENST00000586663 MROH2BQ7Z745 1585 aa35.52■■■■□ 3.28
PEX12-203ENST00000586663 PABPN1Q86U42 306 aaKnown RBP eCLIP35.35■■■■□ 3.25
PEX12-203ENST00000586663 SMARCA4P51532 1647 aa35.34■■■■□ 3.25
PEX12-203ENST00000586663 WIZO95785 1651 aa35.26■■■■□ 3.23
PEX12-203ENST00000586663 CHIC1Q5VXU3 224 aa34.99■■■■□ 3.19
PEX12-203ENST00000586663 TOP2AP11388 1531 aaKnown RBP34.98■■■■□ 3.19
PEX12-203ENST00000586663 PEG3Q9GZU2 1588 aa34.93■■■■□ 3.18
PEX12-203ENST00000586663 SMARCA2P51531 1590 aa34.72■■■■□ 3.15
PEX12-203ENST00000586663 ATAD2BQ9ULI0 1458 aa34.66■■■■□ 3.14
PEX12-203ENST00000586663 EIF4G1Q04637 1599 aaKnown RBP34.58■■■■□ 3.13
PEX12-203ENST00000586663 CCDC88BA6NC98 1476 aa34.55■■■■□ 3.12
PEX12-203ENST00000586663 BAZ1BQ9UIG0 1483 aaKnown RBP34.52■■■■□ 3.12
PEX12-203ENST00000586663 HMGXB3Q12766 1538 aa34.36■■■■□ 3.09
PEX12-203ENST00000586663 NCAPD3P42695 1498 aa34.33■■■■□ 3.09
PEX12-203ENST00000586663 TRIM41Q8WV44 630 aa34.24■■■■□ 3.07
PEX12-203ENST00000586663 CC2D2AQ9P2K1 1620 aa33.99■■■■□ 3.03
PEX12-203ENST00000586663 ABCC8Q09428 1581 aa33.89■■■■□ 3.02
PEX12-203ENST00000586663 WRNQ14191 1432 aaPredicted RBP eCLIP33.72■■■□□ 2.99
PEX12-203ENST00000586663 CFTRP13569 1480 aa33.65■■■□□ 2.98
PEX12-203ENST00000586663 PRDM2Q13029 1718 aa33.58■■■□□ 2.97
PEX12-203ENST00000586663 LOC105371045A0A1W2PR82 267 aa33.57■■■□□ 2.97
PEX12-203ENST00000586663 SYNJ1O43426 1573 aa33.53■■■□□ 2.96
PEX12-203ENST00000586663 FAM9AQ8IZU1 332 aaPredicted RBP33.53■■■□□ 2.96
PEX12-203ENST00000586663 EEA1Q15075 1411 aa33.48■■■□□ 2.95
PEX12-203ENST00000586663 CADPSQ9ULU8 1353 aa33.45■■■□□ 2.95
PEX12-203ENST00000586663 TOP2BQ02880 1626 aa33.43■■■□□ 2.94
PEX12-203ENST00000586663 BIVM-ERCC5R4GMW8 1640 aa33.4■■■□□ 2.94
PEX12-203ENST00000586663 SOGA1O94964 1423 aa33.3■■■□□ 2.92
PEX12-203ENST00000586663 CUX1P39880 1505 aa33.21■■■□□ 2.91
PEX12-203ENST00000586663 LAMC3Q9Y6N6 1575 aa33.16■■■□□ 2.9
PEX12-203ENST00000586663 CSRNP3Q8WYN3 585 aa33.14■■■□□ 2.9
PEX12-203ENST00000586663 RUSC2Q8N2Y8 1516 aa33.13■■■□□ 2.89
PEX12-203ENST00000586663 FANCD2Q9BXW9 1451 aa33.09■■■□□ 2.89
PEX12-203ENST00000586663 KIF21BO75037 1637 aa32.99■■■□□ 2.87
PEX12-203ENST00000586663 NESP48681 1621 aa32.99■■■□□ 2.87
PEX12-203ENST00000586663 GOLGA3Q08378 1498 aa32.98■■■□□ 2.87
PEX12-203ENST00000586663 EHMT2Q96KQ7 1210 aa32.98■■■□□ 2.87
PEX12-203ENST00000586663 CEP164Q9UPV0 1460 aa32.97■■■□□ 2.87
PEX12-203ENST00000586663 TNIKQ9UKE5 1360 aa32.9■■■□□ 2.86
PEX12-203ENST00000586663 DNMBPQ6XZF7 1577 aa32.9■■■□□ 2.86
PEX12-203ENST00000586663 PDS5BQ9NTI5 1447 aa32.88■■■□□ 2.85
PEX12-203ENST00000586663 KIF27Q86VH2 1401 aa32.87■■■□□ 2.85
PEX12-203ENST00000586663 FGD5Q6ZNL6 1462 aa32.83■■■□□ 2.85
PEX12-203ENST00000586663 DNAJC5BQ9UF47 199 aa32.81■■■□□ 2.84
PEX12-203ENST00000586663 TOPBP1Q92547 1522 aa32.77■■■□□ 2.84
PEX12-203ENST00000586663 CEP162Q5TB80 1403 aa32.74■■■□□ 2.83
PEX12-203ENST00000586663 UBTFP17480 764 aaKnown RBP32.73■■■□□ 2.83
PEX12-203ENST00000586663 ERICH3Q5RHP9 1530 aa32.73■■■□□ 2.83
PEX12-203ENST00000586663 PRXQ9BXM0 1461 aa32.68■■■□□ 2.82
PEX12-203ENST00000586663 CUX2O14529 1486 aa32.67■■■□□ 2.82
PEX12-203ENST00000586663 KIF21AQ7Z4S6 1674 aa32.66■■■□□ 2.82
PEX12-203ENST00000586663 RAPGEF2Q9Y4G8 1499 aa32.65■■■□□ 2.82
PEX12-203ENST00000586663 URB2Q14146 1524 aaKnown RBP32.63■■■□□ 2.81
PEX12-203ENST00000586663 POLA1P09884 1462 aaPredicted RBP32.62■■■□□ 2.81
PEX12-203ENST00000586663 ABCA10Q8WWZ4 1543 aa32.58■■■□□ 2.81
PEX12-203ENST00000586663 IGF1RP08069 1367 aa32.46■■■□□ 2.79
PEX12-203ENST00000586663 RAD54L2Q9Y4B4 1467 aa32.46■■■□□ 2.79
PEX12-203ENST00000586663 WDR97A6NE52 1622 aa32.45■■■□□ 2.79
PEX12-203ENST00000586663 TRIM26Q12899 539 aaPredicted RBP32.43■■■□□ 2.78
PEX12-203ENST00000586663 CLIP1P30622 1438 aa32.43■■■□□ 2.78
PEX12-203ENST00000586663 MRC2Q9UBG0 1479 aa32.43■■■□□ 2.78
PEX12-203ENST00000586663 PCGF6Q9BYE7 350 aa32.41■■■□□ 2.78
PEX12-203ENST00000586663 CARMIL1Q5VZK9 1371 aa32.33■■■□□ 2.77
PEX12-203ENST00000586663 CUL7Q14999 1698 aa32.32■■■□□ 2.76
PEX12-203ENST00000586663 ABCA5Q8WWZ7 1642 aa32.3■■■□□ 2.76
PEX12-203ENST00000586663 WDR62O43379 1518 aa32.26■■■□□ 2.75
PEX12-203ENST00000586663 TARBP1Q13395 1621 aaKnown RBP32.25■■■□□ 2.75
PEX12-203ENST00000586663 VPS8Q8N3P4 1428 aa32.2■■■□□ 2.75
PEX12-203ENST00000586663 ERCC6Q03468 1493 aa32.2■■■□□ 2.74
PEX12-203ENST00000586663 GAPVD1Q14C86 1478 aa32.18■■■□□ 2.74
PEX12-203ENST00000586663 TDRD9Q8NDG6 1382 aaKnown RBP32.11■■■□□ 2.73
PEX12-203ENST00000586663 IFT140Q96RY7 1462 aa32.09■■■□□ 2.73
PEX12-203ENST00000586663 THOC2Q8NI27 1593 aaKnown RBP32.07■■■□□ 2.72
PEX12-203ENST00000586663 ARAP1Q96P48 1450 aa32.04■■■□□ 2.72
PEX12-203ENST00000586663 RANGAP1P46060 587 aaPredicted RBP32.01■■■□□ 2.72
PEX12-203ENST00000586663 PBRM1Q86U86 1689 aa32.01■■■□□ 2.72
PEX12-203ENST00000586663 ARHGAP35Q9NRY4 1499 aa31.99■■■□□ 2.71
PEX12-203ENST00000586663 CTTNBP2Q8WZ74 1663 aa31.98■■■□□ 2.71
PEX12-203ENST00000586663 PPARGC1BQ86YN6 1023 aaKnown RBP31.95■■■□□ 2.71
PEX12-203ENST00000586663 GRIN2BQ13224 1484 aa31.91■■■□□ 2.7
PEX12-203ENST00000586663 APLP2Q06481 763 aa31.91■■■□□ 2.7
PEX12-203ENST00000586663 EFCAB5A4FU69 1503 aa31.87■■■□□ 2.69
PEX12-203ENST00000586663 FHAD1B1AJZ9 1412 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms