RNA–Protein interactions for RNA: ENST00000582812.5

NDEL1-215, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-215ENST00000582812 NISCHQ9Y2I1 1504 aa23.25■■□□□ 1.31
NDEL1-215ENST00000582812 CCDC180Q9P1Z9 1646 aa20.92■□□□□ 0.94
NDEL1-215ENST00000582812 ABCC9O60706 1549 aa20.61■□□□□ 0.89
NDEL1-215ENST00000582812 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
NDEL1-215ENST00000582812 NACADO15069 1562 aa19.76■□□□□ 0.75
NDEL1-215ENST00000582812 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
NDEL1-215ENST00000582812 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.69
NDEL1-215ENST00000582812 DNAJC5BQ9UF47 199 aa19.35■□□□□ 0.69
NDEL1-215ENST00000582812 ZCCHC6Q5VYS8 1495 aaKnown RBP19.31■□□□□ 0.68
NDEL1-215ENST00000582812 UNC13AQ9UPW8 1703 aa19.29■□□□□ 0.68
NDEL1-215ENST00000582812 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
NDEL1-215ENST00000582812 SHROOM4Q9ULL8 1493 aa19.23■□□□□ 0.67
NDEL1-215ENST00000582812 DCAF8L2P0C7V8 631 aa19.16■□□□□ 0.66
NDEL1-215ENST00000582812 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
NDEL1-215ENST00000582812 PABPN1Q86U42 306 aaKnown RBP eCLIP19.11■□□□□ 0.65
NDEL1-215ENST00000582812 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
NDEL1-215ENST00000582812 SCRIBQ14160 1630 aa18.8■□□□□ 0.6
NDEL1-215ENST00000582812 EIF4G1Q04637 1599 aaKnown RBP18.74■□□□□ 0.59
NDEL1-215ENST00000582812 CC2D2AQ9P2K1 1620 aa18.72■□□□□ 0.59
NDEL1-215ENST00000582812 CECR2Q9BXF3 1484 aa18.66■□□□□ 0.58
NDEL1-215ENST00000582812 NCAPD3P42695 1498 aa18.26■□□□□ 0.51
NDEL1-215ENST00000582812 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
NDEL1-215ENST00000582812 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
NDEL1-215ENST00000582812 SMARCA2P51531 1590 aa18.11■□□□□ 0.49
NDEL1-215ENST00000582812 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
NDEL1-215ENST00000582812 PEG3Q9GZU2 1588 aa18.09■□□□□ 0.49
NDEL1-215ENST00000582812 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
NDEL1-215ENST00000582812 CUX2O14529 1486 aa17.97■□□□□ 0.47
NDEL1-215ENST00000582812 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
NDEL1-215ENST00000582812 DNAJC5Q9H3Z4 198 aa17.84■□□□□ 0.45
NDEL1-215ENST00000582812 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.45
NDEL1-215ENST00000582812 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
NDEL1-215ENST00000582812 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
NDEL1-215ENST00000582812 NESP48681 1621 aa17.73■□□□□ 0.43
NDEL1-215ENST00000582812 THOC2Q8NI27 1593 aaKnown RBP17.69■□□□□ 0.42
NDEL1-215ENST00000582812 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.42
NDEL1-215ENST00000582812 CADPSQ9ULU8 1353 aa17.63■□□□□ 0.41
NDEL1-215ENST00000582812 WIZO95785 1651 aa17.55■□□□□ 0.4
NDEL1-215ENST00000582812 KIF21AQ7Z4S6 1674 aa17.53■□□□□ 0.4
NDEL1-215ENST00000582812 RSF1Q96T23 1441 aaPredicted RBP17.53■□□□□ 0.4
NDEL1-215ENST00000582812 WDR62O43379 1518 aa17.49■□□□□ 0.39
NDEL1-215ENST00000582812 CFTRP13569 1480 aa17.49■□□□□ 0.39
NDEL1-215ENST00000582812 MRC2Q9UBG0 1479 aa17.48■□□□□ 0.39
NDEL1-215ENST00000582812 TOP2AP11388 1531 aaKnown RBP17.46■□□□□ 0.39
NDEL1-215ENST00000582812 CEP164Q9UPV0 1460 aa17.38■□□□□ 0.37
NDEL1-215ENST00000582812 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
NDEL1-215ENST00000582812 PRDM2Q13029 1718 aa17.26■□□□□ 0.35
NDEL1-215ENST00000582812 URB2Q14146 1524 aaKnown RBP17.24■□□□□ 0.35
NDEL1-215ENST00000582812 CCDC88BA6NC98 1476 aa17.2■□□□□ 0.34
NDEL1-215ENST00000582812 ABCC8Q09428 1581 aa17.13■□□□□ 0.33
NDEL1-215ENST00000582812 IFT140Q96RY7 1462 aa17.1■□□□□ 0.33
NDEL1-215ENST00000582812 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
NDEL1-215ENST00000582812 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
NDEL1-215ENST00000582812 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
NDEL1-215ENST00000582812 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.31
NDEL1-215ENST00000582812 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.3
NDEL1-215ENST00000582812 WDR97A6NE52 1622 aa16.92■□□□□ 0.3
NDEL1-215ENST00000582812 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
NDEL1-215ENST00000582812 POLA1P09884 1462 aaPredicted RBP16.9■□□□□ 0.3
NDEL1-215ENST00000582812 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.286e-9■■■■□ 20
NDEL1-215ENST00000582812 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
NDEL1-215ENST00000582812 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
NDEL1-215ENST00000582812 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
NDEL1-215ENST00000582812 ARHGEF11O15085 1522 aa16.78■□□□□ 0.28
NDEL1-215ENST00000582812 CUX1P39880 1505 aa16.76■□□□□ 0.27
NDEL1-215ENST00000582812 SOGA1O94964 1423 aa16.76■□□□□ 0.27
NDEL1-215ENST00000582812 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
NDEL1-215ENST00000582812 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
NDEL1-215ENST00000582812 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
NDEL1-215ENST00000582812 RAD54L2Q9Y4B4 1467 aa16.73■□□□□ 0.27
NDEL1-215ENST00000582812 CHD1O14646 1710 aa16.7■□□□□ 0.26
NDEL1-215ENST00000582812 GRIN2BQ13224 1484 aa16.68■□□□□ 0.26
NDEL1-215ENST00000582812 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
NDEL1-215ENST00000582812 CLASP1Q7Z460 1538 aa16.67■□□□□ 0.26
NDEL1-215ENST00000582812 ABCA10Q8WWZ4 1543 aa16.67■□□□□ 0.26
NDEL1-215ENST00000582812 SNAPC4Q5SXM2 1469 aa16.64■□□□□ 0.25
NDEL1-215ENST00000582812 SYNJ2O15056 1496 aa16.63■□□□□ 0.25
NDEL1-215ENST00000582812 ABCA5Q8WWZ7 1642 aa16.62■□□□□ 0.25
NDEL1-215ENST00000582812 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
NDEL1-215ENST00000582812 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
NDEL1-215ENST00000582812 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
NDEL1-215ENST00000582812 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
NDEL1-215ENST00000582812 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
NDEL1-215ENST00000582812 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
NDEL1-215ENST00000582812 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
NDEL1-215ENST00000582812 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
NDEL1-215ENST00000582812 CHMP7Q8WUX9 453 aaPredicted RBP16.51■□□□□ 0.23
NDEL1-215ENST00000582812 NUP160Q12769 1436 aa16.48■□□□□ 0.23
NDEL1-215ENST00000582812 FBLN2P98095 1184 aa16.48■□□□□ 0.23
NDEL1-215ENST00000582812 CYB5RLQ6IPT4 315 aa16.48■□□□□ 0.23
NDEL1-215ENST00000582812 ERICH3Q5RHP9 1530 aa16.47■□□□□ 0.23
NDEL1-215ENST00000582812 GRIN2AQ12879 1464 aa16.46■□□□□ 0.23
NDEL1-215ENST00000582812 ADAMTS12P58397 1594 aa16.45■□□□□ 0.22
NDEL1-215ENST00000582812 SUPT5HO00267 1087 aaKnown RBP16.43■□□□□ 0.22
NDEL1-215ENST00000582812 FHAD1B1AJZ9 1412 aa16.43■□□□□ 0.22
NDEL1-215ENST00000582812 SHROOM2Q13796 1616 aa16.41■□□□□ 0.22
NDEL1-215ENST00000582812 CEP170Q5SW79 1584 aa16.36■□□□□ 0.21
NDEL1-215ENST00000582812 ERCC6L2Q5T890 1561 aa16.26■□□□□ 0.19
NDEL1-215ENST00000582812 SENP3Q9H4L4 574 aaPredicted RBP16.24■□□□□ 0.19
NDEL1-215ENST00000582812 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms