RNA–Protein interactions for RNA: ENST00000581932.2

PLEKHM1-208, Transcript of pleckstrin homology and RUN domain containing M1, humanhuman

TSL 5

Gene PLEKHM1, Length 1,163 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHM1-208ENST00000581932 NISCHQ9Y2I1 1504 aa24.63■■□□□ 1.53
PLEKHM1-208ENST00000581932 CCDC180Q9P1Z9 1646 aa22.16■■□□□ 1.14
PLEKHM1-208ENST00000581932 ABCC9O60706 1549 aa22.05■■□□□ 1.12
PLEKHM1-208ENST00000581932 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
PLEKHM1-208ENST00000581932 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
PLEKHM1-208ENST00000581932 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.95
PLEKHM1-208ENST00000581932 NACADO15069 1562 aa20.87■□□□□ 0.93
PLEKHM1-208ENST00000581932 UNC13AQ9UPW8 1703 aa20.64■□□□□ 0.89
PLEKHM1-208ENST00000581932 DCAF8L2P0C7V8 631 aa20.61■□□□□ 0.89
PLEKHM1-208ENST00000581932 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
PLEKHM1-208ENST00000581932 DNAJC5BQ9UF47 199 aa20.57■□□□□ 0.88
PLEKHM1-208ENST00000581932 ZCCHC6Q5VYS8 1495 aaKnown RBP20.47■□□□□ 0.87
PLEKHM1-208ENST00000581932 PABPN1Q86U42 306 aaKnown RBP eCLIP20.46■□□□□ 0.87
PLEKHM1-208ENST00000581932 BICRAQ9NZM4 1560 aa20.44■□□□□ 0.86
PLEKHM1-208ENST00000581932 DCAF1Q9Y4B6 1507 aa20.35■□□□□ 0.85
PLEKHM1-208ENST00000581932 SCRIBQ14160 1630 aa20.19■□□□□ 0.82
PLEKHM1-208ENST00000581932 SHROOM4Q9ULL8 1493 aa20.15■□□□□ 0.82
PLEKHM1-208ENST00000581932 CC2D2AQ9P2K1 1620 aa19.95■□□□□ 0.78
PLEKHM1-208ENST00000581932 EIF4G1Q04637 1599 aaKnown RBP19.92■□□□□ 0.78
PLEKHM1-208ENST00000581932 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
PLEKHM1-208ENST00000581932 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
PLEKHM1-208ENST00000581932 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
PLEKHM1-208ENST00000581932 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
PLEKHM1-208ENST00000581932 HMGXB3Q12766 1538 aa19.17■□□□□ 0.66
PLEKHM1-208ENST00000581932 SMARCA2P51531 1590 aa19.17■□□□□ 0.66
PLEKHM1-208ENST00000581932 BAZ1AQ9NRL2 1556 aaPredicted RBP19.12■□□□□ 0.65
PLEKHM1-208ENST00000581932 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
PLEKHM1-208ENST00000581932 PEG3Q9GZU2 1588 aa19.06■□□□□ 0.64
PLEKHM1-208ENST00000581932 BAZ1BQ9UIG0 1483 aaKnown RBP19.03■□□□□ 0.64
PLEKHM1-208ENST00000581932 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
PLEKHM1-208ENST00000581932 MROH2BQ7Z745 1585 aa18.99■□□□□ 0.63
PLEKHM1-208ENST00000581932 CUX2O14529 1486 aa18.98■□□□□ 0.63
PLEKHM1-208ENST00000581932 NESP48681 1621 aa18.97■□□□□ 0.63
PLEKHM1-208ENST00000581932 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
PLEKHM1-208ENST00000581932 LAMC3Q9Y6N6 1575 aa18.84■□□□□ 0.61
PLEKHM1-208ENST00000581932 DNAJC5Q9H3Z4 198 aa18.82■□□□□ 0.6
PLEKHM1-208ENST00000581932 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
PLEKHM1-208ENST00000581932 WIZO95785 1651 aa18.79■□□□□ 0.6
PLEKHM1-208ENST00000581932 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
PLEKHM1-208ENST00000581932 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
PLEKHM1-208ENST00000581932 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
PLEKHM1-208ENST00000581932 MRC2Q9UBG0 1479 aa18.57■□□□□ 0.56
PLEKHM1-208ENST00000581932 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
PLEKHM1-208ENST00000581932 WDR62O43379 1518 aa18.55■□□□□ 0.56
PLEKHM1-208ENST00000581932 CEP164Q9UPV0 1460 aa18.5■□□□□ 0.55
PLEKHM1-208ENST00000581932 CFTRP13569 1480 aa18.46■□□□□ 0.55
PLEKHM1-208ENST00000581932 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.55
PLEKHM1-208ENST00000581932 PRDM2Q13029 1718 aa18.4■□□□□ 0.54
PLEKHM1-208ENST00000581932 URB2Q14146 1524 aaKnown RBP18.34■□□□□ 0.53
PLEKHM1-208ENST00000581932 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
PLEKHM1-208ENST00000581932 CCDC88BA6NC98 1476 aa18.28■□□□□ 0.52
PLEKHM1-208ENST00000581932 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
PLEKHM1-208ENST00000581932 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
PLEKHM1-208ENST00000581932 DNMBPQ6XZF7 1577 aa18.1■□□□□ 0.49
PLEKHM1-208ENST00000581932 ZNF608Q9ULD9 1512 aaPredicted RBP18.1■□□□□ 0.49
PLEKHM1-208ENST00000581932 EIF4G3O43432 1585 aaKnown RBP18.07■□□□□ 0.48
PLEKHM1-208ENST00000581932 TRIM41Q8WV44 630 aa18.04■□□□□ 0.48
PLEKHM1-208ENST00000581932 ABCC8Q09428 1581 aa18.03■□□□□ 0.48
PLEKHM1-208ENST00000581932 TARBP1Q13395 1621 aaKnown RBP18.01■□□□□ 0.47
PLEKHM1-208ENST00000581932 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
PLEKHM1-208ENST00000581932 POLA1P09884 1462 aaPredicted RBP17.96■□□□□ 0.47
PLEKHM1-208ENST00000581932 RIMBP3CA6NJZ7 1639 aa17.93■□□□□ 0.46
PLEKHM1-208ENST00000581932 RIMBP3BA6NNM3 1639 aa17.93■□□□□ 0.46
PLEKHM1-208ENST00000581932 RIMBP3Q9UFD9 1639 aa17.93■□□□□ 0.46
PLEKHM1-208ENST00000581932 CHD1O14646 1710 aa17.92■□□□□ 0.46
PLEKHM1-208ENST00000581932 AQRO60306 1485 aaKnown RBP eCLIP17.89■□□□□ 0.45
PLEKHM1-208ENST00000581932 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
PLEKHM1-208ENST00000581932 ARHGEF11O15085 1522 aa17.87■□□□□ 0.45
PLEKHM1-208ENST00000581932 CUX1P39880 1505 aa17.85■□□□□ 0.45
PLEKHM1-208ENST00000581932 FGD5Q6ZNL6 1462 aa17.85■□□□□ 0.45
PLEKHM1-208ENST00000581932 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
PLEKHM1-208ENST00000581932 WDR97A6NE52 1622 aa17.82■□□□□ 0.44
PLEKHM1-208ENST00000581932 SOGA1O94964 1423 aa17.8■□□□□ 0.44
PLEKHM1-208ENST00000581932 TDRD9Q8NDG6 1382 aaKnown RBP17.78■□□□□ 0.44
PLEKHM1-208ENST00000581932 SNAPC4Q5SXM2 1469 aa17.76■□□□□ 0.43
PLEKHM1-208ENST00000581932 PBRM1Q86U86 1689 aa17.72■□□□□ 0.43
PLEKHM1-208ENST00000581932 SUPT5HO00267 1087 aaKnown RBP17.7■□□□□ 0.42
PLEKHM1-208ENST00000581932 FBLN2P98095 1184 aa17.7■□□□□ 0.42
PLEKHM1-208ENST00000581932 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
PLEKHM1-208ENST00000581932 MAGI1Q96QZ7 1491 aaPredicted RBP17.69■□□□□ 0.42
PLEKHM1-208ENST00000581932 CLASP1Q7Z460 1538 aa17.69■□□□□ 0.42
PLEKHM1-208ENST00000581932 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
PLEKHM1-208ENST00000581932 ABCA5Q8WWZ7 1642 aa17.68■□□□□ 0.42
PLEKHM1-208ENST00000581932 SYNJ1O43426 1573 aa17.66■□□□□ 0.42
PLEKHM1-208ENST00000581932 SYNJ2O15056 1496 aa17.64■□□□□ 0.41
PLEKHM1-208ENST00000581932 ABCA10Q8WWZ4 1543 aa17.64■□□□□ 0.41
PLEKHM1-208ENST00000581932 GAPVD1Q14C86 1478 aa17.63■□□□□ 0.41
PLEKHM1-208ENST00000581932 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
PLEKHM1-208ENST00000581932 CYB5RLQ6IPT4 315 aa17.59■□□□□ 0.41
PLEKHM1-208ENST00000581932 TOP2BQ02880 1626 aa17.58■□□□□ 0.41
PLEKHM1-208ENST00000581932 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
PLEKHM1-208ENST00000581932 ADAMTS12P58397 1594 aa17.54■□□□□ 0.4
PLEKHM1-208ENST00000581932 WRNQ14191 1432 aaPredicted RBP eCLIP17.53■□□□□ 0.4
PLEKHM1-208ENST00000581932 GRIN2AQ12879 1464 aa17.49■□□□□ 0.39
PLEKHM1-208ENST00000581932 CEP170Q5SW79 1584 aa17.46■□□□□ 0.39
PLEKHM1-208ENST00000581932 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
PLEKHM1-208ENST00000581932 ERCC6L2Q5T890 1561 aa17.42■□□□□ 0.38
PLEKHM1-208ENST00000581932 NUP160Q12769 1436 aa17.42■□□□□ 0.38
PLEKHM1-208ENST00000581932 FHAD1B1AJZ9 1412 aa17.39■□□□□ 0.38
PLEKHM1-208ENST00000581932 SHROOM2Q13796 1616 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms