RNA–Protein interactions for RNA: ENST00000578977.1

LINC02002-201, Transcript of long intergenic non-protein coding RNA 2002, humanhuman

TSL 2 BASIC

Gene LINC02002, Length 1,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02002-201ENST00000578977 NISCHQ9Y2I1 1504 aa27.46■■□□□ 1.99
LINC02002-201ENST00000578977 CCDC180Q9P1Z9 1646 aa24.59■■□□□ 1.53
LINC02002-201ENST00000578977 ABCC9O60706 1549 aa24.25■■□□□ 1.47
LINC02002-201ENST00000578977 RB1CC1Q8TDY2 1594 aa23.25■■□□□ 1.31
LINC02002-201ENST00000578977 NACADO15069 1562 aa23.16■■□□□ 1.3
LINC02002-201ENST00000578977 DCAF8L2P0C7V8 631 aa23.04■■□□□ 1.28
LINC02002-201ENST00000578977 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
LINC02002-201ENST00000578977 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
LINC02002-201ENST00000578977 ZCCHC6Q5VYS8 1495 aaKnown RBP22.83■■□□□ 1.25
LINC02002-201ENST00000578977 DCAF1Q9Y4B6 1507 aa22.74■■□□□ 1.23
LINC02002-201ENST00000578977 UNC13AQ9UPW8 1703 aa22.72■■□□□ 1.23
LINC02002-201ENST00000578977 PABPN1Q86U42 306 aaKnown RBP eCLIP22.58■■□□□ 1.2
LINC02002-201ENST00000578977 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
LINC02002-201ENST00000578977 DNAJC5BQ9UF47 199 aa22.41■■□□□ 1.18
LINC02002-201ENST00000578977 SCRIBQ14160 1630 aa22.38■■□□□ 1.17
LINC02002-201ENST00000578977 SHROOM4Q9ULL8 1493 aa22.3■■□□□ 1.16
LINC02002-201ENST00000578977 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
LINC02002-201ENST00000578977 EIF4G1Q04637 1599 aaKnown RBP21.96■■□□□ 1.11
LINC02002-201ENST00000578977 CC2D2AQ9P2K1 1620 aa21.94■■□□□ 1.1
LINC02002-201ENST00000578977 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.08
LINC02002-201ENST00000578977 SMARCA4P51532 1647 aa21.38■■□□□ 1.01
LINC02002-201ENST00000578977 NCAPD3P42695 1498 aa21.34■■□□□ 1.01
LINC02002-201ENST00000578977 BAZ1AQ9NRL2 1556 aaPredicted RBP21.34■■□□□ 1.01
LINC02002-201ENST00000578977 ATAD2BQ9ULI0 1458 aa21.31■■□□□ 1
LINC02002-201ENST00000578977 SMARCA2P51531 1590 aa21.31■■□□□ 1
LINC02002-201ENST00000578977 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
LINC02002-201ENST00000578977 PEG3Q9GZU2 1588 aa21.18■□□□□ 0.98
LINC02002-201ENST00000578977 MROH2BQ7Z745 1585 aa21.15■□□□□ 0.98
LINC02002-201ENST00000578977 BAZ1BQ9UIG0 1483 aaKnown RBP21.15■□□□□ 0.98
LINC02002-201ENST00000578977 ERCC6Q03468 1493 aa20.95■□□□□ 0.94
LINC02002-201ENST00000578977 WIZO95785 1651 aa20.92■□□□□ 0.94
LINC02002-201ENST00000578977 NESP48681 1621 aa20.89■□□□□ 0.93
LINC02002-201ENST00000578977 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
LINC02002-201ENST00000578977 CUX2O14529 1486 aa20.82■□□□□ 0.92
LINC02002-201ENST00000578977 RSF1Q96T23 1441 aaPredicted RBP20.8■□□□□ 0.92
LINC02002-201ENST00000578977 PDS5BQ9NTI5 1447 aa20.71■□□□□ 0.91
LINC02002-201ENST00000578977 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
LINC02002-201ENST00000578977 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
LINC02002-201ENST00000578977 KIF21AQ7Z4S6 1674 aa20.69■□□□□ 0.9
LINC02002-201ENST00000578977 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
LINC02002-201ENST00000578977 CFTRP13569 1480 aa20.53■□□□□ 0.88
LINC02002-201ENST00000578977 MRC2Q9UBG0 1479 aa20.51■□□□□ 0.87
LINC02002-201ENST00000578977 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
LINC02002-201ENST00000578977 FANCD2Q9BXW9 1451 aa20.48■□□□□ 0.87
LINC02002-201ENST00000578977 WDR62O43379 1518 aa20.45■□□□□ 0.86
LINC02002-201ENST00000578977 DNAJC5Q9H3Z4 198 aa20.43■□□□□ 0.86
LINC02002-201ENST00000578977 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
LINC02002-201ENST00000578977 PRDM2Q13029 1718 aa20.43■□□□□ 0.86
LINC02002-201ENST00000578977 URB2Q14146 1524 aaKnown RBP20.28■□□□□ 0.84
LINC02002-201ENST00000578977 ABCC8Q09428 1581 aa20.13■□□□□ 0.81
LINC02002-201ENST00000578977 TOPBP1Q92547 1522 aa20.12■□□□□ 0.81
LINC02002-201ENST00000578977 DNMBPQ6XZF7 1577 aa20.09■□□□□ 0.81
LINC02002-201ENST00000578977 SUPT5HO00267 1087 aaKnown RBP20.09■□□□□ 0.81
LINC02002-201ENST00000578977 IFT140Q96RY7 1462 aa20.07■□□□□ 0.8
LINC02002-201ENST00000578977 ZNF608Q9ULD9 1512 aaPredicted RBP19.97■□□□□ 0.79
LINC02002-201ENST00000578977 POLA1P09884 1462 aaPredicted RBP19.93■□□□□ 0.78
LINC02002-201ENST00000578977 EIF4G3O43432 1585 aaKnown RBP19.92■□□□□ 0.78
LINC02002-201ENST00000578977 TARBP1Q13395 1621 aaKnown RBP19.92■□□□□ 0.78
LINC02002-201ENST00000578977 OSCARQ8IYS5 282 aa19.88■□□□□ 0.77
LINC02002-201ENST00000578977 CUX1P39880 1505 aa19.87■□□□□ 0.77
LINC02002-201ENST00000578977 FGD5Q6ZNL6 1462 aa19.85■□□□□ 0.77
LINC02002-201ENST00000578977 SOGA1O94964 1423 aa19.84■□□□□ 0.77
LINC02002-201ENST00000578977 RAD54L2Q9Y4B4 1467 aa19.83■□□□□ 0.77
LINC02002-201ENST00000578977 AQRO60306 1485 aaKnown RBP eCLIP19.82■□□□□ 0.76
LINC02002-201ENST00000578977 WDR97A6NE52 1622 aa19.8■□□□□ 0.76
LINC02002-201ENST00000578977 TDRD9Q8NDG6 1382 aaKnown RBP19.74■□□□□ 0.75
LINC02002-201ENST00000578977 CHD1O14646 1710 aa19.73■□□□□ 0.75
LINC02002-201ENST00000578977 TRIM41Q8WV44 630 aa19.67■□□□□ 0.74
LINC02002-201ENST00000578977 SNAPC4Q5SXM2 1469 aa19.66■□□□□ 0.74
LINC02002-201ENST00000578977 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
LINC02002-201ENST00000578977 WRNQ14191 1432 aaPredicted RBP eCLIP19.65■□□□□ 0.74
LINC02002-201ENST00000578977 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
LINC02002-201ENST00000578977 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
LINC02002-201ENST00000578977 FBLN2P98095 1184 aa19.65■□□□□ 0.74
LINC02002-201ENST00000578977 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.74
LINC02002-201ENST00000578977 MAGI1Q96QZ7 1491 aaPredicted RBP19.64■□□□□ 0.73
LINC02002-201ENST00000578977 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
LINC02002-201ENST00000578977 PBRM1Q86U86 1689 aa19.63■□□□□ 0.73
LINC02002-201ENST00000578977 RIMBP3CA6NJZ7 1639 aa19.61■□□□□ 0.73
LINC02002-201ENST00000578977 RIMBP3BA6NNM3 1639 aa19.61■□□□□ 0.73
LINC02002-201ENST00000578977 RIMBP3Q9UFD9 1639 aa19.61■□□□□ 0.73
LINC02002-201ENST00000578977 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
LINC02002-201ENST00000578977 GAPVD1Q14C86 1478 aa19.61■□□□□ 0.73
LINC02002-201ENST00000578977 ABCA5Q8WWZ7 1642 aa19.6■□□□□ 0.73
LINC02002-201ENST00000578977 ARHGEF11O15085 1522 aa19.58■□□□□ 0.72
LINC02002-201ENST00000578977 CHMP7Q8WUX9 453 aaPredicted RBP19.56■□□□□ 0.72
LINC02002-201ENST00000578977 SYNJ2O15056 1496 aa19.55■□□□□ 0.72
LINC02002-201ENST00000578977 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
LINC02002-201ENST00000578977 CLASP1Q7Z460 1538 aa19.48■□□□□ 0.71
LINC02002-201ENST00000578977 ADAMTS12P58397 1594 aa19.44■□□□□ 0.7
LINC02002-201ENST00000578977 ERICH3Q5RHP9 1530 aa19.43■□□□□ 0.7
LINC02002-201ENST00000578977 GRIN2AQ12879 1464 aa19.4■□□□□ 0.7
LINC02002-201ENST00000578977 ARAP1Q96P48 1450 aa19.39■□□□□ 0.69
LINC02002-201ENST00000578977 FHAD1B1AJZ9 1412 aa19.38■□□□□ 0.69
LINC02002-201ENST00000578977 CYB5RLQ6IPT4 315 aa19.38■□□□□ 0.69
LINC02002-201ENST00000578977 NUP160Q12769 1436 aa19.31■□□□□ 0.68
LINC02002-201ENST00000578977 CEP170Q5SW79 1584 aa19.31■□□□□ 0.68
LINC02002-201ENST00000578977 KIF27Q86VH2 1401 aa19.27■□□□□ 0.68
LINC02002-201ENST00000578977 CUL7Q14999 1698 aa19.22■□□□□ 0.67
LINC02002-201ENST00000578977 SHROOM2Q13796 1616 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms