RNA–Protein interactions for RNA: ENST00000575397.5

RFWD3-211, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 2

Gene RFWD3, Length 841 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-211ENST00000575397 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
RFWD3-211ENST00000575397 ABCC9O60706 1549 aa21.2■□□□□ 0.98
RFWD3-211ENST00000575397 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
RFWD3-211ENST00000575397 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
RFWD3-211ENST00000575397 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
RFWD3-211ENST00000575397 NACADO15069 1562 aa19.72■□□□□ 0.75
RFWD3-211ENST00000575397 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
RFWD3-211ENST00000575397 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
RFWD3-211ENST00000575397 AEBP2Q6ZN18 517 aaPredicted RBP19.63■□□□□ 0.73
RFWD3-211ENST00000575397 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
RFWD3-211ENST00000575397 BICRAQ9NZM4 1560 aa19.43■□□□□ 0.7
RFWD3-211ENST00000575397 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
RFWD3-211ENST00000575397 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
RFWD3-211ENST00000575397 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
RFWD3-211ENST00000575397 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
RFWD3-211ENST00000575397 ZCCHC6Q5VYS8 1495 aaKnown RBP19.02■□□□□ 0.63
RFWD3-211ENST00000575397 SCRIBQ14160 1630 aa19■□□□□ 0.63
RFWD3-211ENST00000575397 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
RFWD3-211ENST00000575397 DCAF1Q9Y4B6 1507 aa18.94■□□□□ 0.62
RFWD3-211ENST00000575397 DNAJC5Q9H3Z4 198 aa18.72■□□□□ 0.59
RFWD3-211ENST00000575397 CHIC1Q5VXU3 224 aa18.35■□□□□ 0.53
RFWD3-211ENST00000575397 CUX2O14529 1486 aa18.33■□□□□ 0.53
RFWD3-211ENST00000575397 ERCC6Q03468 1493 aa18.3■□□□□ 0.52
RFWD3-211ENST00000575397 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
RFWD3-211ENST00000575397 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.5
RFWD3-211ENST00000575397 NESP48681 1621 aa18.13■□□□□ 0.49
RFWD3-211ENST00000575397 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
RFWD3-211ENST00000575397 HMGXB3Q12766 1538 aa18.05■□□□□ 0.48
RFWD3-211ENST00000575397 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
RFWD3-211ENST00000575397 THOC2Q8NI27 1593 aaKnown RBP17.98■□□□□ 0.47
RFWD3-211ENST00000575397 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
RFWD3-211ENST00000575397 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
RFWD3-211ENST00000575397 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
RFWD3-211ENST00000575397 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
RFWD3-211ENST00000575397 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
RFWD3-211ENST00000575397 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
RFWD3-211ENST00000575397 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
RFWD3-211ENST00000575397 PDS5BQ9NTI5 1447 aa17.77■□□□□ 0.44
RFWD3-211ENST00000575397 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
RFWD3-211ENST00000575397 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
RFWD3-211ENST00000575397 WDR62O43379 1518 aa17.62■□□□□ 0.41
RFWD3-211ENST00000575397 WIZO95785 1651 aa17.57■□□□□ 0.4
RFWD3-211ENST00000575397 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
RFWD3-211ENST00000575397 FANCD2Q9BXW9 1451 aa17.49■□□□□ 0.39
RFWD3-211ENST00000575397 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
RFWD3-211ENST00000575397 CFTRP13569 1480 aa17.39■□□□□ 0.37
RFWD3-211ENST00000575397 URB2Q14146 1524 aaKnown RBP17.38■□□□□ 0.37
RFWD3-211ENST00000575397 RIMBP3CA6NJZ7 1639 aa17.31■□□□□ 0.36
RFWD3-211ENST00000575397 RIMBP3BA6NNM3 1639 aa17.31■□□□□ 0.36
RFWD3-211ENST00000575397 RIMBP3Q9UFD9 1639 aa17.31■□□□□ 0.36
RFWD3-211ENST00000575397 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.36
RFWD3-211ENST00000575397 RSF1Q96T23 1441 aaPredicted RBP17.27■□□□□ 0.35
RFWD3-211ENST00000575397 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
RFWD3-211ENST00000575397 ARHGEF11O15085 1522 aa17.21■□□□□ 0.34
RFWD3-211ENST00000575397 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
RFWD3-211ENST00000575397 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
RFWD3-211ENST00000575397 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
RFWD3-211ENST00000575397 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
RFWD3-211ENST00000575397 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
RFWD3-211ENST00000575397 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
RFWD3-211ENST00000575397 CHD1O14646 1710 aa17.05■□□□□ 0.32
RFWD3-211ENST00000575397 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
RFWD3-211ENST00000575397 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.323e-8■■■■■ 31.9
RFWD3-211ENST00000575397 ARAP1Q96P48 1450 aa17.03■□□□□ 0.32
RFWD3-211ENST00000575397 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.31
RFWD3-211ENST00000575397 FBLN2P98095 1184 aa17.01■□□□□ 0.31
RFWD3-211ENST00000575397 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
RFWD3-211ENST00000575397 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
RFWD3-211ENST00000575397 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
RFWD3-211ENST00000575397 RAD54L2Q9Y4B4 1467 aa16.91■□□□□ 0.3
RFWD3-211ENST00000575397 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
RFWD3-211ENST00000575397 SNAPC4Q5SXM2 1469 aa16.85■□□□□ 0.29
RFWD3-211ENST00000575397 SOGA1O94964 1423 aa16.84■□□□□ 0.29
RFWD3-211ENST00000575397 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
RFWD3-211ENST00000575397 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
RFWD3-211ENST00000575397 CHMP7Q8WUX9 453 aaPredicted RBP16.79■□□□□ 0.28
RFWD3-211ENST00000575397 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
RFWD3-211ENST00000575397 SYNJ1O43426 1573 aa16.77■□□□□ 0.28
RFWD3-211ENST00000575397 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
RFWD3-211ENST00000575397 CUX1P39880 1505 aa16.72■□□□□ 0.27
RFWD3-211ENST00000575397 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
RFWD3-211ENST00000575397 GRIN2BQ13224 1484 aa16.71■□□□□ 0.27
RFWD3-211ENST00000575397 SYNJ2O15056 1496 aa16.7■□□□□ 0.26
RFWD3-211ENST00000575397 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
RFWD3-211ENST00000575397 PBRM1Q86U86 1689 aa16.65■□□□□ 0.26
RFWD3-211ENST00000575397 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
RFWD3-211ENST00000575397 ABCA5Q8WWZ7 1642 aa16.56■□□□□ 0.24
RFWD3-211ENST00000575397 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
RFWD3-211ENST00000575397 ABCA10Q8WWZ4 1543 aa16.54■□□□□ 0.24
RFWD3-211ENST00000575397 GRIN2AQ12879 1464 aa16.51■□□□□ 0.23
RFWD3-211ENST00000575397 CEP170Q5SW79 1584 aa16.5■□□□□ 0.23
RFWD3-211ENST00000575397 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
RFWD3-211ENST00000575397 NUP160Q12769 1436 aa16.45■□□□□ 0.22
RFWD3-211ENST00000575397 SHROOM2Q13796 1616 aa16.42■□□□□ 0.22
RFWD3-211ENST00000575397 KIF13AQ9H1H9 1805 aa16.41■□□□□ 0.22
RFWD3-211ENST00000575397 WRNQ14191 1432 aaPredicted RBP eCLIP16.39■□□□□ 0.21
RFWD3-211ENST00000575397 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
RFWD3-211ENST00000575397 PRG4Q92954 1404 aaPredicted RBP16.35■□□□□ 0.21
RFWD3-211ENST00000575397 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
RFWD3-211ENST00000575397 TOP2BQ02880 1626 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms