RNA–Protein interactions for RNA: ENST00000574740.1

CREBBP-210, Transcript of CREB binding protein, humanhuman

TSL 5

Gene CREBBP, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBBP-210ENST00000574740 NISCHQ9Y2I1 1504 aa19.64■□□□□ 0.73
CREBBP-210ENST00000574740 ABCC9O60706 1549 aa17.67■□□□□ 0.42
CREBBP-210ENST00000574740 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
CREBBP-210ENST00000574740 AEBP2Q6ZN18 517 aaPredicted RBP17.25■□□□□ 0.35
CREBBP-210ENST00000574740 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
CREBBP-210ENST00000574740 DCAF8L2P0C7V8 631 aa16.72■□□□□ 0.27
CREBBP-210ENST00000574740 NACADO15069 1562 aa16.64■□□□□ 0.25
CREBBP-210ENST00000574740 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
CREBBP-210ENST00000574740 PABPN1Q86U42 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
CREBBP-210ENST00000574740 UNC13AQ9UPW8 1703 aa16.42■□□□□ 0.22
CREBBP-210ENST00000574740 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
CREBBP-210ENST00000574740 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
CREBBP-210ENST00000574740 ZCCHC6Q5VYS8 1495 aaKnown RBP16.27■□□□□ 0.19
CREBBP-210ENST00000574740 BICRAQ9NZM4 1560 aa16.26■□□□□ 0.19
CREBBP-210ENST00000574740 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
CREBBP-210ENST00000574740 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
CREBBP-210ENST00000574740 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
CREBBP-210ENST00000574740 CC2D2AQ9P2K1 1620 aa15.93■□□□□ 0.14
CREBBP-210ENST00000574740 CECR2Q9BXF3 1484 aa15.89■□□□□ 0.13
CREBBP-210ENST00000574740 EIF4G1Q04637 1599 aaKnown RBP15.88■□□□□ 0.13
CREBBP-210ENST00000574740 NCAPD3P42695 1498 aa15.34■□□□□ 0.05
CREBBP-210ENST00000574740 SMARCA4P51532 1647 aa15.34■□□□□ 0.05
CREBBP-210ENST00000574740 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.04
CREBBP-210ENST00000574740 SMARCA2P51531 1590 aa15.3■□□□□ 0.04
CREBBP-210ENST00000574740 ERCC6Q03468 1493 aa15.27■□□□□ 0.04
CREBBP-210ENST00000574740 BAZ1AQ9NRL2 1556 aaPredicted RBP15.25■□□□□ 0.03
CREBBP-210ENST00000574740 HMGXB3Q12766 1538 aa15.25■□□□□ 0.03
CREBBP-210ENST00000574740 BAZ1BQ9UIG0 1483 aaKnown RBP15.22■□□□□ 0.03
CREBBP-210ENST00000574740 NESP48681 1621 aa15.17■□□□□ 0.02
CREBBP-210ENST00000574740 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
CREBBP-210ENST00000574740 CUX2O14529 1486 aa15.15■□□□□ 0.02
CREBBP-210ENST00000574740 DNAJC5Q9H3Z4 198 aa15.14■□□□□ 0.01
CREBBP-210ENST00000574740 PEG3Q9GZU2 1588 aa15.12■□□□□ 0.01
CREBBP-210ENST00000574740 LAMC3Q9Y6N6 1575 aa15.03■□□□□ -0
CREBBP-210ENST00000574740 WIZO95785 1651 aa15□□□□□ -0.01
CREBBP-210ENST00000574740 KIF21AQ7Z4S6 1674 aa14.99□□□□□ -0.01
CREBBP-210ENST00000574740 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
CREBBP-210ENST00000574740 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.01
CREBBP-210ENST00000574740 CADPSQ9ULU8 1353 aa14.91□□□□□ -0.02
CREBBP-210ENST00000574740 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.03
CREBBP-210ENST00000574740 MRC2Q9UBG0 1479 aa14.83□□□□□ -0.03
CREBBP-210ENST00000574740 CEP164Q9UPV0 1460 aa14.79□□□□□ -0.04
CREBBP-210ENST00000574740 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
CREBBP-210ENST00000574740 WDR62O43379 1518 aa14.76□□□□□ -0.05
CREBBP-210ENST00000574740 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
CREBBP-210ENST00000574740 CFTRP13569 1480 aa14.72□□□□□ -0.05
CREBBP-210ENST00000574740 SENP3Q9H4L4 574 aaPredicted RBP14.64□□□□□ -0.07
CREBBP-210ENST00000574740 URB2Q14146 1524 aaKnown RBP14.63□□□□□ -0.07
CREBBP-210ENST00000574740 PRDM2Q13029 1718 aa14.63□□□□□ -0.07
CREBBP-210ENST00000574740 CCDC88BA6NC98 1476 aa14.63□□□□□ -0.07
CREBBP-210ENST00000574740 TRIM41Q8WV44 630 aa14.61□□□□□ -0.07
CREBBP-210ENST00000574740 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
CREBBP-210ENST00000574740 PHF23Q9BUL5 403 aaPredicted RBP14.48□□□□□ -0.09
CREBBP-210ENST00000574740 TOPBP1Q92547 1522 aa14.47□□□□□ -0.09
CREBBP-210ENST00000574740 IFT140Q96RY7 1462 aa14.47□□□□□ -0.09
CREBBP-210ENST00000574740 ZNF608Q9ULD9 1512 aaPredicted RBP14.46□□□□□ -0.1
CREBBP-210ENST00000574740 ABCC8Q09428 1581 aa14.43□□□□□ -0.1
CREBBP-210ENST00000574740 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
CREBBP-210ENST00000574740 EIF4G3O43432 1585 aaKnown RBP14.39□□□□□ -0.11
CREBBP-210ENST00000574740 AQRO60306 1485 aaKnown RBP eCLIP14.35□□□□□ -0.114e-8■■■□□ 18.1
CREBBP-210ENST00000574740 TARBP1Q13395 1621 aaKnown RBP14.33□□□□□ -0.11
CREBBP-210ENST00000574740 FBLN2P98095 1184 aa14.33□□□□□ -0.12
CREBBP-210ENST00000574740 RIMBP3CA6NJZ7 1639 aa14.33□□□□□ -0.12
CREBBP-210ENST00000574740 RIMBP3BA6NNM3 1639 aa14.33□□□□□ -0.12
CREBBP-210ENST00000574740 RIMBP3Q9UFD9 1639 aa14.33□□□□□ -0.12
CREBBP-210ENST00000574740 POLA1P09884 1462 aaPredicted RBP14.32□□□□□ -0.12
CREBBP-210ENST00000574740 SUPT5HO00267 1087 aaKnown RBP14.31□□□□□ -0.12
CREBBP-210ENST00000574740 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
CREBBP-210ENST00000574740 CHD1O14646 1710 aa14.3□□□□□ -0.12
CREBBP-210ENST00000574740 SOGA1O94964 1423 aa14.29□□□□□ -0.12
CREBBP-210ENST00000574740 TDRD9Q8NDG6 1382 aaKnown RBP14.27□□□□□ -0.12
CREBBP-210ENST00000574740 ARHGEF11O15085 1522 aa14.26□□□□□ -0.13
CREBBP-210ENST00000574740 FGD5Q6ZNL6 1462 aa14.26□□□□□ -0.13
CREBBP-210ENST00000574740 CUX1P39880 1505 aa14.24□□□□□ -0.13
CREBBP-210ENST00000574740 SNAPC4Q5SXM2 1469 aa14.2□□□□□ -0.14
CREBBP-210ENST00000574740 CYB5RLQ6IPT4 315 aa14.2□□□□□ -0.14
CREBBP-210ENST00000574740 CHMP7Q8WUX9 453 aaPredicted RBP14.17□□□□□ -0.14
CREBBP-210ENST00000574740 WDR97A6NE52 1622 aa14.16□□□□□ -0.14
CREBBP-210ENST00000574740 GRIN2BQ13224 1484 aa14.14□□□□□ -0.15
CREBBP-210ENST00000574740 PBRM1Q86U86 1689 aa14.13□□□□□ -0.15
CREBBP-210ENST00000574740 ARAP1Q96P48 1450 aa14.12□□□□□ -0.15
CREBBP-210ENST00000574740 MAGI1Q96QZ7 1491 aaPredicted RBP14.12□□□□□ -0.15
CREBBP-210ENST00000574740 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
CREBBP-210ENST00000574740 GAPVD1Q14C86 1478 aa14.11□□□□□ -0.15
CREBBP-210ENST00000574740 TRHP20396 242 aaPredicted RBP14.1□□□□□ -0.15
CREBBP-210ENST00000574740 SYNJ2O15056 1496 aa14.09□□□□□ -0.15
CREBBP-210ENST00000574740 CLASP1Q7Z460 1538 aa14.08□□□□□ -0.16
CREBBP-210ENST00000574740 ABCA10Q8WWZ4 1543 aa14.06□□□□□ -0.16
CREBBP-210ENST00000574740 ABCA5Q8WWZ7 1642 aa14.04□□□□□ -0.16
CREBBP-210ENST00000574740 WRNQ14191 1432 aaPredicted RBP eCLIP14.04□□□□□ -0.16
CREBBP-210ENST00000574740 TOP2BQ02880 1626 aa14.01□□□□□ -0.17
CREBBP-210ENST00000574740 BIVM-ERCC5R4GMW8 1640 aa14.01□□□□□ -0.17
CREBBP-210ENST00000574740 ADAMTS12P58397 1594 aa13.96□□□□□ -0.17
CREBBP-210ENST00000574740 GRIN2AQ12879 1464 aa13.96□□□□□ -0.17
CREBBP-210ENST00000574740 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
CREBBP-210ENST00000574740 FHAD1B1AJZ9 1412 aa13.91□□□□□ -0.18
CREBBP-210ENST00000574740 ERCC6L2Q5T890 1561 aa13.9□□□□□ -0.18
CREBBP-210ENST00000574740 ERICH3Q5RHP9 1530 aa13.9□□□□□ -0.19
CREBBP-210ENST00000574740 NUP160Q12769 1436 aa13.88□□□□□ -0.19
CREBBP-210ENST00000574740 SHROOM2Q13796 1616 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms