RNA–Protein interactions for RNA: ENST00000574297.1

SCIMP-204, Transcript of SLP adaptor and CSK interacting membrane protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCIMP, Length 569 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCIMP-204ENST00000574297 NISCHQ9Y2I1 1504 aa18.37■□□□□ 0.53
SCIMP-204ENST00000574297 ABCC9O60706 1549 aa16.58■□□□□ 0.24
SCIMP-204ENST00000574297 CCDC180Q9P1Z9 1646 aa16.58■□□□□ 0.24
SCIMP-204ENST00000574297 RB1CC1Q8TDY2 1594 aa15.83■□□□□ 0.12
SCIMP-204ENST00000574297 CHIC1Q5VXU3 224 aa15.79■□□□□ 0.12
SCIMP-204ENST00000574297 NACADO15069 1562 aa15.7■□□□□ 0.1
SCIMP-204ENST00000574297 AEBP2Q6ZN18 517 aaPredicted RBP15.65■□□□□ 0.1
SCIMP-204ENST00000574297 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
SCIMP-204ENST00000574297 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
SCIMP-204ENST00000574297 MYO15BQ96JP2 1530 aa15.48■□□□□ 0.07
SCIMP-204ENST00000574297 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCIMP-204ENST00000574297 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
SCIMP-204ENST00000574297 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
SCIMP-204ENST00000574297 DCAF1Q9Y4B6 1507 aa15.23■□□□□ 0.03
SCIMP-204ENST00000574297 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
SCIMP-204ENST00000574297 ZCCHC6Q5VYS8 1495 aaKnown RBP15.21■□□□□ 0.03
SCIMP-204ENST00000574297 SCRIBQ14160 1630 aa15.02□□□□□ -0.01
SCIMP-204ENST00000574297 CC2D2AQ9P2K1 1620 aa15□□□□□ -0.01
SCIMP-204ENST00000574297 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
SCIMP-204ENST00000574297 EIF4G1Q04637 1599 aaKnown RBP14.96□□□□□ -0.01
SCIMP-204ENST00000574297 NCAPD3P42695 1498 aa14.47□□□□□ -0.09
SCIMP-204ENST00000574297 DNAJC5Q9H3Z4 198 aa14.45□□□□□ -0.1
SCIMP-204ENST00000574297 CUX2O14529 1486 aa14.43□□□□□ -0.1
SCIMP-204ENST00000574297 SMARCA2P51531 1590 aa14.39□□□□□ -0.11
SCIMP-204ENST00000574297 ATAD2BQ9ULI0 1458 aa14.39□□□□□ -0.11
SCIMP-204ENST00000574297 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
SCIMP-204ENST00000574297 HMGXB3Q12766 1538 aa14.38□□□□□ -0.11
SCIMP-204ENST00000574297 SMARCA4P51532 1647 aa14.35□□□□□ -0.11
SCIMP-204ENST00000574297 BAZ1AQ9NRL2 1556 aaPredicted RBP14.31□□□□□ -0.12
SCIMP-204ENST00000574297 BAZ1BQ9UIG0 1483 aaKnown RBP14.26□□□□□ -0.13
SCIMP-204ENST00000574297 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
SCIMP-204ENST00000574297 LAMC3Q9Y6N6 1575 aa14.18□□□□□ -0.14
SCIMP-204ENST00000574297 NESP48681 1621 aa14.18□□□□□ -0.14
SCIMP-204ENST00000574297 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
SCIMP-204ENST00000574297 MROH2BQ7Z745 1585 aa14.11□□□□□ -0.15
SCIMP-204ENST00000574297 PDS5BQ9NTI5 1447 aa14.11□□□□□ -0.15
SCIMP-204ENST00000574297 KIF21AQ7Z4S6 1674 aa14.03□□□□□ -0.16
SCIMP-204ENST00000574297 CADPSQ9ULU8 1353 aa14.02□□□□□ -0.17
SCIMP-204ENST00000574297 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
SCIMP-204ENST00000574297 WDR62O43379 1518 aa13.94□□□□□ -0.18
SCIMP-204ENST00000574297 WIZO95785 1651 aa13.93□□□□□ -0.18
SCIMP-204ENST00000574297 PHF23Q9BUL5 403 aaPredicted RBP13.92□□□□□ -0.18
SCIMP-204ENST00000574297 CEP164Q9UPV0 1460 aa13.9□□□□□ -0.18
SCIMP-204ENST00000574297 FANCD2Q9BXW9 1451 aa13.85□□□□□ -0.19
SCIMP-204ENST00000574297 CFTRP13569 1480 aa13.84□□□□□ -0.19
SCIMP-204ENST00000574297 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
SCIMP-204ENST00000574297 RSF1Q96T23 1441 aaPredicted RBP13.8□□□□□ -0.2
SCIMP-204ENST00000574297 TRIM41Q8WV44 630 aa13.75□□□□□ -0.21
SCIMP-204ENST00000574297 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
SCIMP-204ENST00000574297 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
SCIMP-204ENST00000574297 URB2Q14146 1524 aaKnown RBP13.7□□□□□ -0.22
SCIMP-204ENST00000574297 IFT140Q96RY7 1462 aa13.63□□□□□ -0.23
SCIMP-204ENST00000574297 ABCC8Q09428 1581 aa13.62□□□□□ -0.23
SCIMP-204ENST00000574297 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
SCIMP-204ENST00000574297 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
SCIMP-204ENST00000574297 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
SCIMP-204ENST00000574297 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
SCIMP-204ENST00000574297 RIMBP3CA6NJZ7 1639 aa13.51□□□□□ -0.25
SCIMP-204ENST00000574297 RIMBP3BA6NNM3 1639 aa13.51□□□□□ -0.25
SCIMP-204ENST00000574297 RIMBP3Q9UFD9 1639 aa13.51□□□□□ -0.25
SCIMP-204ENST00000574297 EIF4G3O43432 1585 aaKnown RBP13.5□□□□□ -0.25
SCIMP-204ENST00000574297 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
SCIMP-204ENST00000574297 TARBP1Q13395 1621 aaKnown RBP13.45□□□□□ -0.26
SCIMP-204ENST00000574297 POLA1P09884 1462 aaPredicted RBP13.42□□□□□ -0.26
SCIMP-204ENST00000574297 WDR97A6NE52 1622 aa13.41□□□□□ -0.26
SCIMP-204ENST00000574297 AQRO60306 1485 aaKnown RBP eCLIP13.41□□□□□ -0.26
SCIMP-204ENST00000574297 CHD1O14646 1710 aa13.39□□□□□ -0.27
SCIMP-204ENST00000574297 SOGA1O94964 1423 aa13.37□□□□□ -0.27
SCIMP-204ENST00000574297 FBLN2P98095 1184 aa13.36□□□□□ -0.27
SCIMP-204ENST00000574297 CYB5RLQ6IPT4 315 aa13.35□□□□□ -0.27
SCIMP-204ENST00000574297 RAD54L2Q9Y4B4 1467 aa13.33□□□□□ -0.28
SCIMP-204ENST00000574297 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
SCIMP-204ENST00000574297 ARAP1Q96P48 1450 aa13.31□□□□□ -0.28
SCIMP-204ENST00000574297 MAGI1Q96QZ7 1491 aaPredicted RBP13.31□□□□□ -0.28
SCIMP-204ENST00000574297 TDRD9Q8NDG6 1382 aaKnown RBP13.31□□□□□ -0.28
SCIMP-204ENST00000574297 SNAPC4Q5SXM2 1469 aa13.3□□□□□ -0.28
SCIMP-204ENST00000574297 SYNJ1O43426 1573 aa13.3□□□□□ -0.28
SCIMP-204ENST00000574297 GRIN2BQ13224 1484 aa13.29□□□□□ -0.28
SCIMP-204ENST00000574297 CHMP7Q8WUX9 453 aaPredicted RBP13.28□□□□□ -0.28
SCIMP-204ENST00000574297 CUX1P39880 1505 aa13.27□□□□□ -0.29
SCIMP-204ENST00000574297 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.29
SCIMP-204ENST00000574297 SYNJ2O15056 1496 aa13.25□□□□□ -0.29
SCIMP-204ENST00000574297 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
SCIMP-204ENST00000574297 SENP3Q9H4L4 574 aaPredicted RBP13.24□□□□□ -0.29
SCIMP-204ENST00000574297 GAPVD1Q14C86 1478 aa13.22□□□□□ -0.29
SCIMP-204ENST00000574297 ABCA10Q8WWZ4 1543 aa13.2□□□□□ -0.3
SCIMP-204ENST00000574297 PBRM1Q86U86 1689 aa13.2□□□□□ -0.3
SCIMP-204ENST00000574297 SUPT5HO00267 1087 aaKnown RBP13.17□□□□□ -0.3
SCIMP-204ENST00000574297 ABCA5Q8WWZ7 1642 aa13.17□□□□□ -0.3
SCIMP-204ENST00000574297 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
SCIMP-204ENST00000574297 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
SCIMP-204ENST00000574297 ADAMTS12P58397 1594 aa13.08□□□□□ -0.32
SCIMP-204ENST00000574297 BIVM-ERCC5R4GMW8 1640 aa13.08□□□□□ -0.32
SCIMP-204ENST00000574297 TOP2BQ02880 1626 aa13.07□□□□□ -0.32
SCIMP-204ENST00000574297 NUP160Q12769 1436 aa13.06□□□□□ -0.32
SCIMP-204ENST00000574297 PLPPR3Q6T4P5 718 aa13.06□□□□□ -0.32
SCIMP-204ENST00000574297 FHAD1B1AJZ9 1412 aa13.05□□□□□ -0.32
SCIMP-204ENST00000574297 ERICH3Q5RHP9 1530 aa13.05□□□□□ -0.32
SCIMP-204ENST00000574297 CEP170Q5SW79 1584 aa13.03□□□□□ -0.32
SCIMP-204ENST00000574297 SHROOM2Q13796 1616 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms