RNA–Protein interactions for RNA: ENST00000573724.1

STRA6-217, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 3

Gene STRA6, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-217ENST00000573724 NISCHQ9Y2I1 1504 aa32.06■■■□□ 2.72
STRA6-217ENST00000573724 ABCC9O60706 1549 aa29.06■■■□□ 2.24
STRA6-217ENST00000573724 CCDC180Q9P1Z9 1646 aa28.78■■■□□ 2.2
STRA6-217ENST00000573724 RB1CC1Q8TDY2 1594 aa27.5■■□□□ 1.99
STRA6-217ENST00000573724 DNAJC5BQ9UF47 199 aa27.46■■□□□ 1.99
STRA6-217ENST00000573724 NACADO15069 1562 aa27.26■■□□□ 1.95
STRA6-217ENST00000573724 DCAF8L2P0C7V8 631 aa27.23■■□□□ 1.95
STRA6-217ENST00000573724 AEBP2Q6ZN18 517 aaPredicted RBP27.23■■□□□ 1.95
STRA6-217ENST00000573724 PABPN1Q86U42 306 aaKnown RBP eCLIP27.08■■□□□ 1.93
STRA6-217ENST00000573724 UNC13AQ9UPW8 1703 aa26.93■■□□□ 1.9
STRA6-217ENST00000573724 CHIC1Q5VXU3 224 aa26.86■■□□□ 1.89
STRA6-217ENST00000573724 MYO15BQ96JP2 1530 aa26.78■■□□□ 1.88
STRA6-217ENST00000573724 BICRAQ9NZM4 1560 aa26.76■■□□□ 1.87
STRA6-217ENST00000573724 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
STRA6-217ENST00000573724 DCAF1Q9Y4B6 1507 aa26.4■■□□□ 1.82
STRA6-217ENST00000573724 SCRIBQ14160 1630 aa26.32■■□□□ 1.8
STRA6-217ENST00000573724 SHROOM4Q9ULL8 1493 aa26.24■■□□□ 1.79
STRA6-217ENST00000573724 CC2D2AQ9P2K1 1620 aa26.21■■□□□ 1.79
STRA6-217ENST00000573724 CECR2Q9BXF3 1484 aa26.16■■□□□ 1.78
STRA6-217ENST00000573724 EIF4G1Q04637 1599 aaKnown RBP26.1■■□□□ 1.77
STRA6-217ENST00000573724 DNAJC5Q9H3Z4 198 aa25.24■■□□□ 1.63
STRA6-217ENST00000573724 NCAPD3P42695 1498 aa25.19■■□□□ 1.62
STRA6-217ENST00000573724 ATAD2BQ9ULI0 1458 aa25.12■■□□□ 1.61
STRA6-217ENST00000573724 ERCC6Q03468 1493 aa25.06■■□□□ 1.6
STRA6-217ENST00000573724 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
STRA6-217ENST00000573724 CUX2O14529 1486 aa25.02■■□□□ 1.6
STRA6-217ENST00000573724 SMARCA2P51531 1590 aa24.99■■□□□ 1.59
STRA6-217ENST00000573724 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
STRA6-217ENST00000573724 NESP48681 1621 aa24.94■■□□□ 1.58
STRA6-217ENST00000573724 BAZ1AQ9NRL2 1556 aaPredicted RBP24.87■■□□□ 1.57
STRA6-217ENST00000573724 BAZ1BQ9UIG0 1483 aaKnown RBP24.86■■□□□ 1.57
STRA6-217ENST00000573724 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
STRA6-217ENST00000573724 MROH2BQ7Z745 1585 aa24.75■■□□□ 1.55
STRA6-217ENST00000573724 THOC2Q8NI27 1593 aaKnown RBP24.65■■□□□ 1.54
STRA6-217ENST00000573724 LAMC3Q9Y6N6 1575 aa24.63■■□□□ 1.53
STRA6-217ENST00000573724 KIF21AQ7Z4S6 1674 aa24.56■■□□□ 1.52
STRA6-217ENST00000573724 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
STRA6-217ENST00000573724 WIZO95785 1651 aa24.45■■□□□ 1.5
STRA6-217ENST00000573724 CADPSQ9ULU8 1353 aa24.43■■□□□ 1.5
STRA6-217ENST00000573724 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
STRA6-217ENST00000573724 WDR62O43379 1518 aa24.25■■□□□ 1.47
STRA6-217ENST00000573724 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
STRA6-217ENST00000573724 FANCD2Q9BXW9 1451 aa24.18■■□□□ 1.46
STRA6-217ENST00000573724 RSF1Q96T23 1441 aaPredicted RBP24.17■■□□□ 1.46
STRA6-217ENST00000573724 TRIM41Q8WV44 630 aa24.14■■□□□ 1.45
STRA6-217ENST00000573724 CFTRP13569 1480 aa24.11■■□□□ 1.45
STRA6-217ENST00000573724 TOP2AP11388 1531 aaKnown RBP24.08■■□□□ 1.45
STRA6-217ENST00000573724 URB2Q14146 1524 aaKnown RBP24.01■■□□□ 1.43
STRA6-217ENST00000573724 OSCARQ8IYS5 282 aa23.89■■□□□ 1.41
STRA6-217ENST00000573724 CCDC88BA6NC98 1476 aa23.85■■□□□ 1.41
STRA6-217ENST00000573724 PRDM2Q13029 1718 aa23.83■■□□□ 1.41
STRA6-217ENST00000573724 ZNF608Q9ULD9 1512 aaPredicted RBP23.76■■□□□ 1.39
STRA6-217ENST00000573724 PHF23Q9BUL5 403 aaPredicted RBP23.74■■□□□ 1.39
STRA6-217ENST00000573724 IFT140Q96RY7 1462 aa23.7■■□□□ 1.38
STRA6-217ENST00000573724 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
STRA6-217ENST00000573724 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
STRA6-217ENST00000573724 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
STRA6-217ENST00000573724 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
STRA6-217ENST00000573724 EIF4G3O43432 1585 aaKnown RBP23.57■■□□□ 1.36
STRA6-217ENST00000573724 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
STRA6-217ENST00000573724 ABCC8Q09428 1581 aa23.56■■□□□ 1.36
STRA6-217ENST00000573724 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.36
STRA6-217ENST00000573724 ARHGEF11O15085 1522 aa23.51■■□□□ 1.35
STRA6-217ENST00000573724 TARBP1Q13395 1621 aaKnown RBP23.5■■□□□ 1.35
STRA6-217ENST00000573724 CHD1O14646 1710 aa23.45■■□□□ 1.34
STRA6-217ENST00000573724 POLA1P09884 1462 aaPredicted RBP23.44■■□□□ 1.34
STRA6-217ENST00000573724 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
STRA6-217ENST00000573724 FBLN2P98095 1184 aa23.41■■□□□ 1.34
STRA6-217ENST00000573724 CYB5RLQ6IPT4 315 aa23.4■■□□□ 1.34
STRA6-217ENST00000573724 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
STRA6-217ENST00000573724 SOGA1O94964 1423 aa23.34■■□□□ 1.33
STRA6-217ENST00000573724 FGD5Q6ZNL6 1462 aa23.29■■□□□ 1.32
STRA6-217ENST00000573724 ARAP1Q96P48 1450 aa23.29■■□□□ 1.32
STRA6-217ENST00000573724 SNAPC4Q5SXM2 1469 aa23.25■■□□□ 1.31
STRA6-217ENST00000573724 CUX1P39880 1505 aa23.25■■□□□ 1.31
STRA6-217ENST00000573724 TRHP20396 242 aaPredicted RBP23.19■■□□□ 1.3
STRA6-217ENST00000573724 CHMP7Q8WUX9 453 aaPredicted RBP23.17■■□□□ 1.3
STRA6-217ENST00000573724 CLASP1Q7Z460 1538 aa23.15■■□□□ 1.3
STRA6-217ENST00000573724 WDR97A6NE52 1622 aa23.15■■□□□ 1.3
STRA6-217ENST00000573724 GRIN2BQ13224 1484 aa23.13■■□□□ 1.29
STRA6-217ENST00000573724 MAGI1Q96QZ7 1491 aaPredicted RBP23.13■■□□□ 1.29
STRA6-217ENST00000573724 SYNJ1O43426 1573 aa23.1■■□□□ 1.29
STRA6-217ENST00000573724 SYNJ2O15056 1496 aa23.07■■□□□ 1.28
STRA6-217ENST00000573724 SUPT5HO00267 1087 aaKnown RBP23.05■■□□□ 1.28
STRA6-217ENST00000573724 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
STRA6-217ENST00000573724 PBRM1Q86U86 1689 aa23.04■■□□□ 1.28
STRA6-217ENST00000573724 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
STRA6-217ENST00000573724 ABCA5Q8WWZ7 1642 aa22.97■■□□□ 1.27
STRA6-217ENST00000573724 SENP3Q9H4L4 574 aaPredicted RBP22.91■■□□□ 1.26
STRA6-217ENST00000573724 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
STRA6-217ENST00000573724 ERCC6L2Q5T890 1561 aa22.85■■□□□ 1.25
STRA6-217ENST00000573724 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
STRA6-217ENST00000573724 ADAMTS12P58397 1594 aa22.81■■□□□ 1.24
STRA6-217ENST00000573724 TOP2BQ02880 1626 aa22.8■■□□□ 1.24
STRA6-217ENST00000573724 CEP170Q5SW79 1584 aa22.8■■□□□ 1.24
STRA6-217ENST00000573724 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
STRA6-217ENST00000573724 NUP160Q12769 1436 aa22.76■■□□□ 1.23
STRA6-217ENST00000573724 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
STRA6-217ENST00000573724 SHROOM2Q13796 1616 aa22.68■■□□□ 1.22
STRA6-217ENST00000573724 ERICH3Q5RHP9 1530 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms