RNA–Protein interactions for RNA: ENST00000570256.5

USP7-221, Transcript of ubiquitin specific peptidase 7, humanhuman

TSL 3

Gene USP7, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-221ENST00000570256 NISCHQ9Y2I1 1504 aa19.39■□□□□ 0.69
USP7-221ENST00000570256 AEBP2Q6ZN18 517 aaPredicted RBP17.82■□□□□ 0.44
USP7-221ENST00000570256 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
USP7-221ENST00000570256 ABCC9O60706 1549 aa17.19■□□□□ 0.34
USP7-221ENST00000570256 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.31
USP7-221ENST00000570256 RB1CC1Q8TDY2 1594 aa16.55■□□□□ 0.24
USP7-221ENST00000570256 NACADO15069 1562 aa16.47■□□□□ 0.23
USP7-221ENST00000570256 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
USP7-221ENST00000570256 UNC13AQ9UPW8 1703 aa16.13■□□□□ 0.17
USP7-221ENST00000570256 DCAF1Q9Y4B6 1507 aa16.13■□□□□ 0.17
USP7-221ENST00000570256 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
USP7-221ENST00000570256 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
USP7-221ENST00000570256 BICRAQ9NZM4 1560 aa16■□□□□ 0.15
USP7-221ENST00000570256 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
USP7-221ENST00000570256 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
USP7-221ENST00000570256 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
USP7-221ENST00000570256 SCRIBQ14160 1630 aa15.75■□□□□ 0.11
USP7-221ENST00000570256 EIF4G1Q04637 1599 aaKnown RBP15.62■□□□□ 0.09
USP7-221ENST00000570256 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
USP7-221ENST00000570256 CECR2Q9BXF3 1484 aa15.54■□□□□ 0.08
USP7-221ENST00000570256 NCAPD3P42695 1498 aa15.18■□□□□ 0.02
USP7-221ENST00000570256 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
USP7-221ENST00000570256 SMARCA4P51532 1647 aa15.11■□□□□ 0.01
USP7-221ENST00000570256 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
USP7-221ENST00000570256 HMGXB3Q12766 1538 aa15.11■□□□□ 0.01
USP7-221ENST00000570256 ATAD2BQ9ULI0 1458 aa15.09■□□□□ 0.01
USP7-221ENST00000570256 BAZ1AQ9NRL2 1556 aaPredicted RBP15.08■□□□□ 0
USP7-221ENST00000570256 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
USP7-221ENST00000570256 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
USP7-221ENST00000570256 CUX2O14529 1486 aa14.95□□□□□ -0.02
USP7-221ENST00000570256 PHF23Q9BUL5 403 aaPredicted RBP14.93□□□□□ -0.02
USP7-221ENST00000570256 ERCC6Q03468 1493 aa14.89□□□□□ -0.03
USP7-221ENST00000570256 MROH2BQ7Z745 1585 aa14.87□□□□□ -0.03
USP7-221ENST00000570256 LAMC3Q9Y6N6 1575 aa14.85□□□□□ -0.03
USP7-221ENST00000570256 NESP48681 1621 aa14.77□□□□□ -0.04
USP7-221ENST00000570256 DNAJC5Q9H3Z4 198 aa14.76□□□□□ -0.05
USP7-221ENST00000570256 PDS5BQ9NTI5 1447 aa14.73□□□□□ -0.05
USP7-221ENST00000570256 THOC2Q8NI27 1593 aaKnown RBP14.73□□□□□ -0.05
USP7-221ENST00000570256 WIZO95785 1651 aa14.69□□□□□ -0.06
USP7-221ENST00000570256 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
USP7-221ENST00000570256 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
USP7-221ENST00000570256 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
USP7-221ENST00000570256 TOP2AP11388 1531 aaKnown RBP14.59□□□□□ -0.07
USP7-221ENST00000570256 MRC2Q9UBG0 1479 aa14.57□□□□□ -0.08
USP7-221ENST00000570256 WDR62O43379 1518 aa14.56□□□□□ -0.08
USP7-221ENST00000570256 CFTRP13569 1480 aa14.55□□□□□ -0.08
USP7-221ENST00000570256 CEP164Q9UPV0 1460 aa14.53□□□□□ -0.08
USP7-221ENST00000570256 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
USP7-221ENST00000570256 PRDM2Q13029 1718 aa14.48□□□□□ -0.09
USP7-221ENST00000570256 CCDC88BA6NC98 1476 aa14.36□□□□□ -0.11
USP7-221ENST00000570256 URB2Q14146 1524 aaKnown RBP14.35□□□□□ -0.11
USP7-221ENST00000570256 ABCC8Q09428 1581 aa14.31□□□□□ -0.12
USP7-221ENST00000570256 IFT140Q96RY7 1462 aa14.25□□□□□ -0.13
USP7-221ENST00000570256 TOPBP1Q92547 1522 aa14.23□□□□□ -0.13
USP7-221ENST00000570256 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
USP7-221ENST00000570256 OSCARQ8IYS5 282 aa14.18□□□□□ -0.14
USP7-221ENST00000570256 EIF4G3O43432 1585 aaKnown RBP14.13□□□□□ -0.15
USP7-221ENST00000570256 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
USP7-221ENST00000570256 ZNF608Q9ULD9 1512 aaPredicted RBP14.12□□□□□ -0.15
USP7-221ENST00000570256 FOXD1Q16676 465 aa14.12□□□□□ -0.15
USP7-221ENST00000570256 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
USP7-221ENST00000570256 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
USP7-221ENST00000570256 SOGA1O94964 1423 aa14□□□□□ -0.17
USP7-221ENST00000570256 TRIM41Q8WV44 630 aa14□□□□□ -0.17
USP7-221ENST00000570256 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.172e-7■■■□□ 17.9
USP7-221ENST00000570256 FGD5Q6ZNL6 1462 aa13.99□□□□□ -0.17
USP7-221ENST00000570256 CHD1O14646 1710 aa13.99□□□□□ -0.17
USP7-221ENST00000570256 RIMBP3CA6NJZ7 1639 aa13.99□□□□□ -0.17
USP7-221ENST00000570256 RIMBP3BA6NNM3 1639 aa13.99□□□□□ -0.17
USP7-221ENST00000570256 RIMBP3Q9UFD9 1639 aa13.99□□□□□ -0.17
USP7-221ENST00000570256 CUX1P39880 1505 aa13.99□□□□□ -0.17
USP7-221ENST00000570256 ARHGEF11O15085 1522 aa13.97□□□□□ -0.17
USP7-221ENST00000570256 MAGI1Q96QZ7 1491 aaPredicted RBP13.96□□□□□ -0.17
USP7-221ENST00000570256 RAD54L2Q9Y4B4 1467 aa13.95□□□□□ -0.18
USP7-221ENST00000570256 GRIN2BQ13224 1484 aa13.92□□□□□ -0.18
USP7-221ENST00000570256 TDRD9Q8NDG6 1382 aaKnown RBP13.91□□□□□ -0.18
USP7-221ENST00000570256 ABCA10Q8WWZ4 1543 aa13.9□□□□□ -0.19
USP7-221ENST00000570256 SNAPC4Q5SXM2 1469 aa13.89□□□□□ -0.19
USP7-221ENST00000570256 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
USP7-221ENST00000570256 SYNJ2O15056 1496 aa13.88□□□□□ -0.19
USP7-221ENST00000570256 PBRM1Q86U86 1689 aa13.88□□□□□ -0.19
USP7-221ENST00000570256 ABCA5Q8WWZ7 1642 aa13.87□□□□□ -0.19
USP7-221ENST00000570256 CLASP1Q7Z460 1538 aa13.87□□□□□ -0.19
USP7-221ENST00000570256 GAPVD1Q14C86 1478 aa13.86□□□□□ -0.19
USP7-221ENST00000570256 BIVM-ERCC5R4GMW8 1640 aa13.86□□□□□ -0.19
USP7-221ENST00000570256 SUPT5HO00267 1087 aaKnown RBP13.85□□□□□ -0.19
USP7-221ENST00000570256 WRNQ14191 1432 aaPredicted RBP eCLIP13.84□□□□□ -0.19
USP7-221ENST00000570256 TOP2BQ02880 1626 aa13.84□□□□□ -0.19
USP7-221ENST00000570256 FBLN2P98095 1184 aa13.84□□□□□ -0.19
USP7-221ENST00000570256 CHMP7Q8WUX9 453 aaPredicted RBP13.82□□□□□ -0.2
USP7-221ENST00000570256 ARAP1Q96P48 1450 aa13.81□□□□□ -0.2
USP7-221ENST00000570256 CYB5RLQ6IPT4 315 aa13.77□□□□□ -0.21
USP7-221ENST00000570256 ERICH3Q5RHP9 1530 aa13.75□□□□□ -0.21
USP7-221ENST00000570256 ADAMTS12P58397 1594 aa13.75□□□□□ -0.21
USP7-221ENST00000570256 GRIN2AQ12879 1464 aa13.74□□□□□ -0.21
USP7-221ENST00000570256 FHAD1B1AJZ9 1412 aa13.71□□□□□ -0.22
USP7-221ENST00000570256 NUP160Q12769 1436 aa13.71□□□□□ -0.22
USP7-221ENST00000570256 SHROOM2Q13796 1616 aa13.67□□□□□ -0.22
USP7-221ENST00000570256 CEP170Q5SW79 1584 aa13.66□□□□□ -0.22
USP7-221ENST00000570256 CUL7Q14999 1698 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms