RNA–Protein interactions for RNA: ENST00000569450.1

GRAMD2A-212, Transcript of GRAM domain containing 2A, humanhuman

TSL 5

Gene GRAMD2A, Length 513 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2A-212ENST00000569450 NISCHQ9Y2I1 1504 aa17.41■□□□□ 0.38
GRAMD2A-212ENST00000569450 ABCC9O60706 1549 aa16.33■□□□□ 0.2
GRAMD2A-212ENST00000569450 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
GRAMD2A-212ENST00000569450 DNAJC5BQ9UF47 199 aa15.76■□□□□ 0.11
GRAMD2A-212ENST00000569450 RB1CC1Q8TDY2 1594 aa15.43■□□□□ 0.06
GRAMD2A-212ENST00000569450 NACADO15069 1562 aa15.2■□□□□ 0.02
GRAMD2A-212ENST00000569450 UNC13AQ9UPW8 1703 aa15.11■□□□□ 0.01
GRAMD2A-212ENST00000569450 CHIC1Q5VXU3 224 aa15.07■□□□□ 0
GRAMD2A-212ENST00000569450 PABPN1Q86U42 306 aaKnown RBP eCLIP15.03■□□□□ -0
GRAMD2A-212ENST00000569450 DNAJC5Q9H3Z4 198 aa14.98□□□□□ -0.01
GRAMD2A-212ENST00000569450 BICRAQ9NZM4 1560 aa14.97□□□□□ -0.01
GRAMD2A-212ENST00000569450 MYO15BQ96JP2 1530 aa14.87□□□□□ -0.03
GRAMD2A-212ENST00000569450 SHROOM4Q9ULL8 1493 aa14.86□□□□□ -0.03
GRAMD2A-212ENST00000569450 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
GRAMD2A-212ENST00000569450 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
GRAMD2A-212ENST00000569450 DCAF8L2P0C7V8 631 aa14.71□□□□□ -0.05
GRAMD2A-212ENST00000569450 EIF4G1Q04637 1599 aaKnown RBP14.65□□□□□ -0.06
GRAMD2A-212ENST00000569450 DCAF1Q9Y4B6 1507 aa14.45□□□□□ -0.1
GRAMD2A-212ENST00000569450 CUX2O14529 1486 aa14.44□□□□□ -0.1
GRAMD2A-212ENST00000569450 AEBP2Q6ZN18 517 aaPredicted RBP14.41□□□□□ -0.1
GRAMD2A-212ENST00000569450 SCRIBQ14160 1630 aa14.37□□□□□ -0.11
GRAMD2A-212ENST00000569450 ZCCHC6Q5VYS8 1495 aaKnown RBP14.32□□□□□ -0.12
GRAMD2A-212ENST00000569450 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
GRAMD2A-212ENST00000569450 NCAPD3P42695 1498 aa14□□□□□ -0.17
GRAMD2A-212ENST00000569450 TRIM41Q8WV44 630 aa13.96□□□□□ -0.17
GRAMD2A-212ENST00000569450 THOC2Q8NI27 1593 aaKnown RBP13.96□□□□□ -0.18
GRAMD2A-212ENST00000569450 HMGXB3Q12766 1538 aa13.9□□□□□ -0.19
GRAMD2A-212ENST00000569450 NESP48681 1621 aa13.86□□□□□ -0.19
GRAMD2A-212ENST00000569450 ATAD2BQ9ULI0 1458 aa13.85□□□□□ -0.19
GRAMD2A-212ENST00000569450 SMARCA2P51531 1590 aa13.84□□□□□ -0.19
GRAMD2A-212ENST00000569450 LAMC3Q9Y6N6 1575 aa13.82□□□□□ -0.2
GRAMD2A-212ENST00000569450 KIF21AQ7Z4S6 1674 aa13.76□□□□□ -0.21
GRAMD2A-212ENST00000569450 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
GRAMD2A-212ENST00000569450 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.22
GRAMD2A-212ENST00000569450 BAZ1AQ9NRL2 1556 aaPredicted RBP13.7□□□□□ -0.22
GRAMD2A-212ENST00000569450 BAZ1BQ9UIG0 1483 aaKnown RBP13.68□□□□□ -0.22
GRAMD2A-212ENST00000569450 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
GRAMD2A-212ENST00000569450 WDR62O43379 1518 aa13.64□□□□□ -0.23
GRAMD2A-212ENST00000569450 MRC2Q9UBG0 1479 aa13.61□□□□□ -0.23
GRAMD2A-212ENST00000569450 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
GRAMD2A-212ENST00000569450 RIMBP3CA6NJZ7 1639 aa13.52□□□□□ -0.25
GRAMD2A-212ENST00000569450 RIMBP3BA6NNM3 1639 aa13.52□□□□□ -0.25
GRAMD2A-212ENST00000569450 RIMBP3Q9UFD9 1639 aa13.52□□□□□ -0.25
GRAMD2A-212ENST00000569450 CADPSQ9ULU8 1353 aa13.51□□□□□ -0.25
GRAMD2A-212ENST00000569450 CEP164Q9UPV0 1460 aa13.44□□□□□ -0.26
GRAMD2A-212ENST00000569450 ARHGEF11O15085 1522 aa13.42□□□□□ -0.26
GRAMD2A-212ENST00000569450 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
GRAMD2A-212ENST00000569450 MROH2BQ7Z745 1585 aa13.35□□□□□ -0.27
GRAMD2A-212ENST00000569450 PHF23Q9BUL5 403 aaPredicted RBP13.28□□□□□ -0.28
GRAMD2A-212ENST00000569450 URB2Q14146 1524 aaKnown RBP13.28□□□□□ -0.28
GRAMD2A-212ENST00000569450 CFTRP13569 1480 aa13.27□□□□□ -0.29
GRAMD2A-212ENST00000569450 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
GRAMD2A-212ENST00000569450 CYB5RLQ6IPT4 315 aa13.23□□□□□ -0.29
GRAMD2A-212ENST00000569450 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
GRAMD2A-212ENST00000569450 PRDM2Q13029 1718 aa13.22□□□□□ -0.29
GRAMD2A-212ENST00000569450 IFT140Q96RY7 1462 aa13.21□□□□□ -0.3
GRAMD2A-212ENST00000569450 RSF1Q96T23 1441 aaPredicted RBP13.2□□□□□ -0.3
GRAMD2A-212ENST00000569450 WIZO95785 1651 aa13.18□□□□□ -0.3
GRAMD2A-212ENST00000569450 CHD1O14646 1710 aa13.17□□□□□ -0.3
GRAMD2A-212ENST00000569450 ZNF608Q9ULD9 1512 aaPredicted RBP13.17□□□□□ -0.3
GRAMD2A-212ENST00000569450 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
GRAMD2A-212ENST00000569450 ABCC8Q09428 1581 aa13.06□□□□□ -0.32
GRAMD2A-212ENST00000569450 TOPBP1Q92547 1522 aa13.05□□□□□ -0.32
GRAMD2A-212ENST00000569450 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
GRAMD2A-212ENST00000569450 TARBP1Q13395 1621 aaKnown RBP13.02□□□□□ -0.33
GRAMD2A-212ENST00000569450 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
GRAMD2A-212ENST00000569450 CLASP1Q7Z460 1538 aa13.01□□□□□ -0.33
GRAMD2A-212ENST00000569450 DNMBPQ6XZF7 1577 aa12.99□□□□□ -0.33
GRAMD2A-212ENST00000569450 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.34
GRAMD2A-212ENST00000569450 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
GRAMD2A-212ENST00000569450 SYNJ1O43426 1573 aa12.95□□□□□ -0.34
GRAMD2A-212ENST00000569450 FBLN2P98095 1184 aa12.91□□□□□ -0.34
GRAMD2A-212ENST00000569450 POLA1P09884 1462 aaPredicted RBP12.88□□□□□ -0.35
GRAMD2A-212ENST00000569450 MAGI1Q96QZ7 1491 aaPredicted RBP12.87□□□□□ -0.35
GRAMD2A-212ENST00000569450 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
GRAMD2A-212ENST00000569450 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
GRAMD2A-212ENST00000569450 ILDR1Q86SU0 546 aaPredicted RBP12.83□□□□□ -0.36
GRAMD2A-212ENST00000569450 KIF13AQ9H1H9 1805 aa12.82□□□□□ -0.36
GRAMD2A-212ENST00000569450 CCDC88BA6NC98 1476 aa12.81□□□□□ -0.36
GRAMD2A-212ENST00000569450 SYNJ2O15056 1496 aa12.81□□□□□ -0.36
GRAMD2A-212ENST00000569450 CHMP7Q8WUX9 453 aaPredicted RBP12.8□□□□□ -0.36
GRAMD2A-212ENST00000569450 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
GRAMD2A-212ENST00000569450 HRCP23327 699 aa12.77□□□□□ -0.37
GRAMD2A-212ENST00000569450 TDRD9Q8NDG6 1382 aaKnown RBP12.77□□□□□ -0.37
GRAMD2A-212ENST00000569450 RAD54L2Q9Y4B4 1467 aa12.77□□□□□ -0.37
GRAMD2A-212ENST00000569450 SOGA1O94964 1423 aa12.76□□□□□ -0.37
GRAMD2A-212ENST00000569450 MYT1Q01538 1121 aa12.73□□□□□ -0.37
GRAMD2A-212ENST00000569450 PBRM1Q86U86 1689 aa12.73□□□□□ -0.37
GRAMD2A-212ENST00000569450 PLPPR3Q6T4P5 718 aa12.72□□□□□ -0.37
GRAMD2A-212ENST00000569450 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
GRAMD2A-212ENST00000569450 ERCC6L2Q5T890 1561 aa12.67□□□□□ -0.38
GRAMD2A-212ENST00000569450 SHROOM2Q13796 1616 aa12.66□□□□□ -0.38
GRAMD2A-212ENST00000569450 CEP170Q5SW79 1584 aa12.65□□□□□ -0.38
GRAMD2A-212ENST00000569450 KDM4FA0A1W2PPD8 638 aa12.64□□□□□ -0.39
GRAMD2A-212ENST00000569450 ABCA5Q8WWZ7 1642 aa12.62□□□□□ -0.39
GRAMD2A-212ENST00000569450 GRIN2AQ12879 1464 aa12.61□□□□□ -0.39
GRAMD2A-212ENST00000569450 ABCC10Q5T3U5 1492 aa12.61□□□□□ -0.39
GRAMD2A-212ENST00000569450 KDM6BO15054 1643 aa12.61□□□□□ -0.39
GRAMD2A-212ENST00000569450 NUP160Q12769 1436 aa12.61□□□□□ -0.39
GRAMD2A-212ENST00000569450 MAPKBP1O60336 1514 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms