RNA–Protein interactions for RNA: ENST00000568359.1

SNX29-206, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-206ENST00000568359 NISCHQ9Y2I1 1504 aa13.54□□□□□ -0.24
SNX29-206ENST00000568359 ABCC9O60706 1549 aa12.38□□□□□ -0.43
SNX29-206ENST00000568359 CCDC180Q9P1Z9 1646 aa12.29□□□□□ -0.44
SNX29-206ENST00000568359 RB1CC1Q8TDY2 1594 aa11.76□□□□□ -0.53
SNX29-206ENST00000568359 DNAJC5BQ9UF47 199 aa11.62□□□□□ -0.55
SNX29-206ENST00000568359 NACADO15069 1562 aa11.61□□□□□ -0.55
SNX29-206ENST00000568359 CHIC1Q5VXU3 224 aa11.6□□□□□ -0.55
SNX29-206ENST00000568359 DCAF8L2P0C7V8 631 aa11.52□□□□□ -0.57
SNX29-206ENST00000568359 UNC13AQ9UPW8 1703 aa11.51□□□□□ -0.57
SNX29-206ENST00000568359 PABPN1Q86U42 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
SNX29-206ENST00000568359 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
SNX29-206ENST00000568359 BICRAQ9NZM4 1560 aa11.35□□□□□ -0.59
SNX29-206ENST00000568359 AEBP2Q6ZN18 517 aaPredicted RBP11.26□□□□□ -0.61
SNX29-206ENST00000568359 SHROOM4Q9ULL8 1493 aa11.22□□□□□ -0.61
SNX29-206ENST00000568359 SCRIBQ14160 1630 aa11.2□□□□□ -0.62
SNX29-206ENST00000568359 CC2D2AQ9P2K1 1620 aa11.2□□□□□ -0.62
SNX29-206ENST00000568359 ZCCHC6Q5VYS8 1495 aaKnown RBP11.19□□□□□ -0.62
SNX29-206ENST00000568359 CECR2Q9BXF3 1484 aa11.17□□□□□ -0.62
SNX29-206ENST00000568359 DCAF1Q9Y4B6 1507 aa11.16□□□□□ -0.62
SNX29-206ENST00000568359 EIF4G1Q04637 1599 aaKnown RBP11.12□□□□□ -0.63
SNX29-206ENST00000568359 DNAJC5Q9H3Z4 198 aa10.82□□□□□ -0.68
SNX29-206ENST00000568359 ERCC6Q03468 1493 aa10.76□□□□□ -0.69
SNX29-206ENST00000568359 CUX2O14529 1486 aa10.74□□□□□ -0.69
SNX29-206ENST00000568359 NCAPD3P42695 1498 aa10.66□□□□□ -0.7
SNX29-206ENST00000568359 SMARCA2P51531 1590 aa10.65□□□□□ -0.71
SNX29-206ENST00000568359 HMGXB3Q12766 1538 aa10.63□□□□□ -0.71
SNX29-206ENST00000568359 SMARCA4P51532 1647 aa10.63□□□□□ -0.71
SNX29-206ENST00000568359 ATAD2BQ9ULI0 1458 aa10.62□□□□□ -0.71
SNX29-206ENST00000568359 BAZ1BQ9UIG0 1483 aaKnown RBP10.58□□□□□ -0.72
SNX29-206ENST00000568359 NESP48681 1621 aa10.58□□□□□ -0.72
SNX29-206ENST00000568359 BAZ1AQ9NRL2 1556 aaPredicted RBP10.56□□□□□ -0.72
SNX29-206ENST00000568359 THOC2Q8NI27 1593 aaKnown RBP10.54□□□□□ -0.72
SNX29-206ENST00000568359 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.72
SNX29-206ENST00000568359 KIF21AQ7Z4S6 1674 aa10.51□□□□□ -0.73
SNX29-206ENST00000568359 PEG3Q9GZU2 1588 aa10.49□□□□□ -0.73
SNX29-206ENST00000568359 PDS5BQ9NTI5 1447 aa10.44□□□□□ -0.74
SNX29-206ENST00000568359 MROH2BQ7Z745 1585 aa10.42□□□□□ -0.74
SNX29-206ENST00000568359 PHF23Q9BUL5 403 aaPredicted RBP10.4□□□□□ -0.74
SNX29-206ENST00000568359 TRIM41Q8WV44 630 aa10.38□□□□□ -0.75
SNX29-206ENST00000568359 MRC2Q9UBG0 1479 aa10.37□□□□□ -0.75
SNX29-206ENST00000568359 WDR62O43379 1518 aa10.34□□□□□ -0.75
SNX29-206ENST00000568359 CADPSQ9ULU8 1353 aa10.34□□□□□ -0.75
SNX29-206ENST00000568359 WIZO95785 1651 aa10.34□□□□□ -0.75
SNX29-206ENST00000568359 CEP164Q9UPV0 1460 aa10.32□□□□□ -0.76
SNX29-206ENST00000568359 FANCD2Q9BXW9 1451 aa10.27□□□□□ -0.77
SNX29-206ENST00000568359 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
SNX29-206ENST00000568359 PRDM2Q13029 1718 aa10.22□□□□□ -0.77
SNX29-206ENST00000568359 CFTRP13569 1480 aa10.2□□□□□ -0.78
SNX29-206ENST00000568359 TOP2AP11388 1531 aaKnown RBP10.19□□□□□ -0.78
SNX29-206ENST00000568359 OSCARQ8IYS5 282 aa10.18□□□□□ -0.78
SNX29-206ENST00000568359 EHMT2Q96KQ7 1210 aa10.18□□□□□ -0.78
SNX29-206ENST00000568359 URB2Q14146 1524 aaKnown RBP10.17□□□□□ -0.78
SNX29-206ENST00000568359 RIMBP3CA6NJZ7 1639 aa10.13□□□□□ -0.79
SNX29-206ENST00000568359 RIMBP3BA6NNM3 1639 aa10.13□□□□□ -0.79
SNX29-206ENST00000568359 RIMBP3Q9UFD9 1639 aa10.13□□□□□ -0.79
SNX29-206ENST00000568359 RSF1Q96T23 1441 aaPredicted RBP10.12□□□□□ -0.79
SNX29-206ENST00000568359 IFT140Q96RY7 1462 aa10.09□□□□□ -0.79
SNX29-206ENST00000568359 EIF4G3O43432 1585 aaKnown RBP10.08□□□□□ -0.8
SNX29-206ENST00000568359 ARHGEF11O15085 1522 aa10.07□□□□□ -0.8
SNX29-206ENST00000568359 ZNF608Q9ULD9 1512 aaPredicted RBP10.07□□□□□ -0.8
SNX29-206ENST00000568359 CHD1O14646 1710 aa10.05□□□□□ -0.8
SNX29-206ENST00000568359 TOPBP1Q92547 1522 aa10.05□□□□□ -0.8
SNX29-206ENST00000568359 ABCC8Q09428 1581 aa10.03□□□□□ -0.8
SNX29-206ENST00000568359 DNMBPQ6XZF7 1577 aa10.03□□□□□ -0.8
SNX29-206ENST00000568359 CCDC88BA6NC98 1476 aa10.03□□□□□ -0.8
SNX29-206ENST00000568359 TARBP1Q13395 1621 aaKnown RBP9.97□□□□□ -0.81
SNX29-206ENST00000568359 TRHP20396 242 aaPredicted RBP9.97□□□□□ -0.81
SNX29-206ENST00000568359 FBLN2P98095 1184 aa9.97□□□□□ -0.81
SNX29-206ENST00000568359 CYB5RLQ6IPT4 315 aa9.97□□□□□ -0.81
SNX29-206ENST00000568359 AQRO60306 1485 aaKnown RBP eCLIP9.95□□□□□ -0.82
SNX29-206ENST00000568359 POLA1P09884 1462 aaPredicted RBP9.93□□□□□ -0.82
SNX29-206ENST00000568359 ARAP1Q96P48 1450 aa9.93□□□□□ -0.82
SNX29-206ENST00000568359 WDR97A6NE52 1622 aa9.9□□□□□ -0.82
SNX29-206ENST00000568359 SYNJ1O43426 1573 aa9.9□□□□□ -0.82
SNX29-206ENST00000568359 SNAPC4Q5SXM2 1469 aa9.89□□□□□ -0.83
SNX29-206ENST00000568359 RAD54L2Q9Y4B4 1467 aa9.89□□□□□ -0.83
SNX29-206ENST00000568359 SOGA1O94964 1423 aa9.88□□□□□ -0.83
SNX29-206ENST00000568359 TDRD9Q8NDG6 1382 aaKnown RBP9.87□□□□□ -0.83
SNX29-206ENST00000568359 FGD5Q6ZNL6 1462 aa9.86□□□□□ -0.83
SNX29-206ENST00000568359 PBRM1Q86U86 1689 aa9.86□□□□□ -0.83
SNX29-206ENST00000568359 CLASP1Q7Z460 1538 aa9.86□□□□□ -0.83
SNX29-206ENST00000568359 MAGI1Q96QZ7 1491 aaPredicted RBP9.85□□□□□ -0.83
SNX29-206ENST00000568359 CHMP7Q8WUX9 453 aaPredicted RBP9.84□□□□□ -0.83
SNX29-206ENST00000568359 GRIN2BQ13224 1484 aa9.83□□□□□ -0.84
SNX29-206ENST00000568359 SYNJ2O15056 1496 aa9.82□□□□□ -0.84
SNX29-206ENST00000568359 CUX1P39880 1505 aa9.82□□□□□ -0.84
SNX29-206ENST00000568359 GAPVD1Q14C86 1478 aa9.78□□□□□ -0.84
SNX29-206ENST00000568359 ABCA5Q8WWZ7 1642 aa9.76□□□□□ -0.85
SNX29-206ENST00000568359 PLPPR3Q6T4P5 718 aa9.76□□□□□ -0.85
SNX29-206ENST00000568359 ABCA10Q8WWZ4 1543 aa9.72□□□□□ -0.85
SNX29-206ENST00000568359 GRIN2AQ12879 1464 aa9.71□□□□□ -0.86
SNX29-206ENST00000568359 ADAMTS12P58397 1594 aa9.71□□□□□ -0.86
SNX29-206ENST00000568359 KCNA4P22459 653 aa9.7□□□□□ -0.86
SNX29-206ENST00000568359 CEP170Q5SW79 1584 aa9.68□□□□□ -0.86
SNX29-206ENST00000568359 ERCC6L2Q5T890 1561 aa9.68□□□□□ -0.86
SNX29-206ENST00000568359 WRNQ14191 1432 aaPredicted RBP eCLIP9.67□□□□□ -0.86
SNX29-206ENST00000568359 CSRNP3Q8WYN3 585 aa9.66□□□□□ -0.86
SNX29-206ENST00000568359 SHROOM2Q13796 1616 aa9.66□□□□□ -0.86
SNX29-206ENST00000568359 BIVM-ERCC5R4GMW8 1640 aa9.66□□□□□ -0.86
SNX29-206ENST00000568359 TOP2BQ02880 1626 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms