RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-238ENST00000568169 NISCHQ9Y2I1 1504 aa29■■■□□ 2.23
TCF4-238ENST00000568169 ABCC9O60706 1549 aa26.33■■□□□ 1.81
TCF4-238ENST00000568169 CCDC180Q9P1Z9 1646 aa26.17■■□□□ 1.78
TCF4-238ENST00000568169 RB1CC1Q8TDY2 1594 aa24.99■■□□□ 1.59
TCF4-238ENST00000568169 DNAJC5BQ9UF47 199 aa24.93■■□□□ 1.58
TCF4-238ENST00000568169 NACADO15069 1562 aa24.77■■□□□ 1.56
TCF4-238ENST00000568169 UNC13AQ9UPW8 1703 aa24.52■■□□□ 1.52
TCF4-238ENST00000568169 DCAF8L2P0C7V8 631 aa24.5■■□□□ 1.51
TCF4-238ENST00000568169 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.5
TCF4-238ENST00000568169 MYO15BQ96JP2 1530 aa24.37■■□□□ 1.49
TCF4-238ENST00000568169 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
TCF4-238ENST00000568169 AEBP2Q6ZN18 517 aaPredicted RBP24.28■■□□□ 1.48
TCF4-238ENST00000568169 ZCCHC6Q5VYS8 1495 aaKnown RBP23.98■■□□□ 1.43
TCF4-238ENST00000568169 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
TCF4-238ENST00000568169 SHROOM4Q9ULL8 1493 aa23.93■■□□□ 1.42
TCF4-238ENST00000568169 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
TCF4-238ENST00000568169 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
TCF4-238ENST00000568169 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
TCF4-238ENST00000568169 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
TCF4-238ENST00000568169 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
TCF4-238ENST00000568169 DNAJC5Q9H3Z4 198 aa23.07■■□□□ 1.28
TCF4-238ENST00000568169 NCAPD3P42695 1498 aa22.86■■□□□ 1.25
TCF4-238ENST00000568169 CUX2O14529 1486 aa22.8■■□□□ 1.24
TCF4-238ENST00000568169 ATAD2BQ9ULI0 1458 aa22.74■■□□□ 1.23
TCF4-238ENST00000568169 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
TCF4-238ENST00000568169 SMARCA4P51532 1647 aa22.69■■□□□ 1.22
TCF4-238ENST00000568169 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
TCF4-238ENST00000568169 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
TCF4-238ENST00000568169 NESP48681 1621 aa22.56■■□□□ 1.2
TCF4-238ENST00000568169 BAZ1AQ9NRL2 1556 aaPredicted RBP22.52■■□□□ 1.2
TCF4-238ENST00000568169 BAZ1BQ9UIG0 1483 aaKnown RBP22.5■■□□□ 1.19
TCF4-238ENST00000568169 PEG3Q9GZU2 1588 aa22.49■■□□□ 1.19
TCF4-238ENST00000568169 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
TCF4-238ENST00000568169 LAMC3Q9Y6N6 1575 aa22.39■■□□□ 1.18
TCF4-238ENST00000568169 MROH2BQ7Z745 1585 aa22.34■■□□□ 1.17
TCF4-238ENST00000568169 KIF21AQ7Z4S6 1674 aa22.31■■□□□ 1.16
TCF4-238ENST00000568169 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
TCF4-238ENST00000568169 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
TCF4-238ENST00000568169 WIZO95785 1651 aa22.08■■□□□ 1.13
TCF4-238ENST00000568169 MRC2Q9UBG0 1479 aa22.07■■□□□ 1.12
TCF4-238ENST00000568169 WDR62O43379 1518 aa22.04■■□□□ 1.12
TCF4-238ENST00000568169 CEP164Q9UPV0 1460 aa21.92■■□□□ 1.1
TCF4-238ENST00000568169 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
TCF4-238ENST00000568169 FANCD2Q9BXW9 1451 aa21.88■■□□□ 1.09
TCF4-238ENST00000568169 CFTRP13569 1480 aa21.84■■□□□ 1.09
TCF4-238ENST00000568169 RSF1Q96T23 1441 aaPredicted RBP21.78■■□□□ 1.08
TCF4-238ENST00000568169 TOP2AP11388 1531 aaKnown RBP21.77■■□□□ 1.08
TCF4-238ENST00000568169 URB2Q14146 1524 aaKnown RBP21.73■■□□□ 1.07
TCF4-238ENST00000568169 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
TCF4-238ENST00000568169 PRDM2Q13029 1718 aa21.7■■□□□ 1.06
TCF4-238ENST00000568169 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.03
TCF4-238ENST00000568169 IFT140Q96RY7 1462 aa21.5■■□□□ 1.03
TCF4-238ENST00000568169 RIMBP3CA6NJZ7 1639 aa21.49■■□□□ 1.03
TCF4-238ENST00000568169 RIMBP3BA6NNM3 1639 aa21.49■■□□□ 1.03
TCF4-238ENST00000568169 RIMBP3Q9UFD9 1639 aa21.49■■□□□ 1.03
TCF4-238ENST00000568169 ZNF608Q9ULD9 1512 aaPredicted RBP21.49■■□□□ 1.03
TCF4-238ENST00000568169 TOPBP1Q92547 1522 aa21.46■■□□□ 1.03
TCF4-238ENST00000568169 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
TCF4-238ENST00000568169 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
TCF4-238ENST00000568169 ARHGEF11O15085 1522 aa21.37■■□□□ 1.01
TCF4-238ENST00000568169 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
TCF4-238ENST00000568169 TARBP1Q13395 1621 aaKnown RBP21.31■■□□□ 1
TCF4-238ENST00000568169 CHD1O14646 1710 aa21.31■■□□□ 1
TCF4-238ENST00000568169 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.99
TCF4-238ENST00000568169 POLA1P09884 1462 aaPredicted RBP21.21■□□□□ 0.99
TCF4-238ENST00000568169 CYB5RLQ6IPT4 315 aa21.21■□□□□ 0.99
TCF4-238ENST00000568169 ARAP1Q96P48 1450 aa21.14■□□□□ 0.98
TCF4-238ENST00000568169 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
TCF4-238ENST00000568169 FBLN2P98095 1184 aa21.13■□□□□ 0.97
TCF4-238ENST00000568169 SOGA1O94964 1423 aa21.11■□□□□ 0.97
TCF4-238ENST00000568169 TDRD9Q8NDG6 1382 aaKnown RBP21.09■□□□□ 0.97
TCF4-238ENST00000568169 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
TCF4-238ENST00000568169 FGD5Q6ZNL6 1462 aa21.05■□□□□ 0.96
TCF4-238ENST00000568169 SNAPC4Q5SXM2 1469 aa21.03■□□□□ 0.96
TCF4-238ENST00000568169 CLASP1Q7Z460 1538 aa21.03■□□□□ 0.96
TCF4-238ENST00000568169 TRHP20396 242 aaPredicted RBP21.02■□□□□ 0.96
TCF4-238ENST00000568169 CUX1P39880 1505 aa21■□□□□ 0.95
TCF4-238ENST00000568169 MAGI1Q96QZ7 1491 aaPredicted RBP20.99■□□□□ 0.95
TCF4-238ENST00000568169 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
TCF4-238ENST00000568169 GRIN2BQ13224 1484 aa20.95■□□□□ 0.94
TCF4-238ENST00000568169 CHMP7Q8WUX9 453 aaPredicted RBP20.95■□□□□ 0.94
TCF4-238ENST00000568169 SYNJ2O15056 1496 aa20.92■□□□□ 0.94
TCF4-238ENST00000568169 PBRM1Q86U86 1689 aa20.91■□□□□ 0.94
TCF4-238ENST00000568169 GAPVD1Q14C86 1478 aa20.85■□□□□ 0.93
TCF4-238ENST00000568169 ABCA5Q8WWZ7 1642 aa20.82■□□□□ 0.92
TCF4-238ENST00000568169 ABCA10Q8WWZ4 1543 aa20.81■□□□□ 0.92
TCF4-238ENST00000568169 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
TCF4-238ENST00000568169 GRIN2AQ12879 1464 aa20.69■□□□□ 0.9
TCF4-238ENST00000568169 ERCC6L2Q5T890 1561 aa20.67■□□□□ 0.9
TCF4-238ENST00000568169 ADAMTS12P58397 1594 aa20.66■□□□□ 0.9
TCF4-238ENST00000568169 WRNQ14191 1432 aaPredicted RBP eCLIP20.65■□□□□ 0.9
TCF4-238ENST00000568169 CEP170Q5SW79 1584 aa20.64■□□□□ 0.9
TCF4-238ENST00000568169 NUP160Q12769 1436 aa20.64■□□□□ 0.89
TCF4-238ENST00000568169 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.89
TCF4-238ENST00000568169 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
TCF4-238ENST00000568169 SHROOM2Q13796 1616 aa20.61■□□□□ 0.89
TCF4-238ENST00000568169 SUPT5HO00267 1087 aaKnown RBP20.59■□□□□ 0.89
TCF4-238ENST00000568169 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.88
TCF4-238ENST00000568169 ERICH3Q5RHP9 1530 aa20.54■□□□□ 0.88
TCF4-238ENST00000568169 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms