RNA–Protein interactions for RNA: ENST00000567842.5

XPO6-212, Transcript of exportin 6, humanhuman

TSL 5

Gene XPO6, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPO6-212ENST00000567842 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
XPO6-212ENST00000567842 CCDC180Q9P1Z9 1646 aa23.57■■□□□ 1.36
XPO6-212ENST00000567842 ABCC9O60706 1549 aa23.55■■□□□ 1.36
XPO6-212ENST00000567842 AEBP2Q6ZN18 517 aaPredicted RBP23.11■■□□□ 1.29
XPO6-212ENST00000567842 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
XPO6-212ENST00000567842 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
XPO6-212ENST00000567842 NACADO15069 1562 aa22.33■■□□□ 1.16
XPO6-212ENST00000567842 DCAF8L2P0C7V8 631 aa22.23■■□□□ 1.15
XPO6-212ENST00000567842 DNAJC5BQ9UF47 199 aa22.09■■□□□ 1.13
XPO6-212ENST00000567842 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
XPO6-212ENST00000567842 PABPN1Q86U42 306 aaKnown RBP eCLIP21.98■■□□□ 1.11
XPO6-212ENST00000567842 ZCCHC6Q5VYS8 1495 aaKnown RBP21.85■■□□□ 1.09
XPO6-212ENST00000567842 UNC13AQ9UPW8 1703 aa21.85■■□□□ 1.09
XPO6-212ENST00000567842 DCAF1Q9Y4B6 1507 aa21.79■■□□□ 1.08
XPO6-212ENST00000567842 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
XPO6-212ENST00000567842 SHROOM4Q9ULL8 1493 aa21.55■■□□□ 1.04
XPO6-212ENST00000567842 SCRIBQ14160 1630 aa21.49■■□□□ 1.03
XPO6-212ENST00000567842 CC2D2AQ9P2K1 1620 aa21.26■□□□□ 0.99
XPO6-212ENST00000567842 EIF4G1Q04637 1599 aaKnown RBP21.25■□□□□ 0.99
XPO6-212ENST00000567842 CECR2Q9BXF3 1484 aa21.24■□□□□ 0.99
XPO6-212ENST00000567842 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
XPO6-212ENST00000567842 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
XPO6-212ENST00000567842 SMARCA4P51532 1647 aa20.52■□□□□ 0.88
XPO6-212ENST00000567842 SMARCA2P51531 1590 aa20.5■□□□□ 0.87
XPO6-212ENST00000567842 HMGXB3Q12766 1538 aa20.46■□□□□ 0.87
XPO6-212ENST00000567842 BAZ1AQ9NRL2 1556 aaPredicted RBP20.44■□□□□ 0.86
XPO6-212ENST00000567842 BAZ1BQ9UIG0 1483 aaKnown RBP20.36■□□□□ 0.85
XPO6-212ENST00000567842 ERCC6Q03468 1493 aa20.35■□□□□ 0.85
XPO6-212ENST00000567842 PEG3Q9GZU2 1588 aa20.34■□□□□ 0.85
XPO6-212ENST00000567842 CUX2O14529 1486 aa20.31■□□□□ 0.84
XPO6-212ENST00000567842 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
XPO6-212ENST00000567842 DNAJC5Q9H3Z4 198 aa20.26■□□□□ 0.83
XPO6-212ENST00000567842 NESP48681 1621 aa20.25■□□□□ 0.83
XPO6-212ENST00000567842 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
XPO6-212ENST00000567842 PDS5BQ9NTI5 1447 aa20.04■□□□□ 0.8
XPO6-212ENST00000567842 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
XPO6-212ENST00000567842 WIZO95785 1651 aa20.01■□□□□ 0.79
XPO6-212ENST00000567842 THOC2Q8NI27 1593 aaKnown RBP20.01■□□□□ 0.79
XPO6-212ENST00000567842 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
XPO6-212ENST00000567842 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
XPO6-212ENST00000567842 MRC2Q9UBG0 1479 aa19.85■□□□□ 0.77
XPO6-212ENST00000567842 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
XPO6-212ENST00000567842 CFTRP13569 1480 aa19.79■□□□□ 0.76
XPO6-212ENST00000567842 WDR62O43379 1518 aa19.79■□□□□ 0.76
XPO6-212ENST00000567842 SENP3Q9H4L4 574 aaPredicted RBP19.77■□□□□ 0.76
XPO6-212ENST00000567842 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
XPO6-212ENST00000567842 FANCD2Q9BXW9 1451 aa19.76■□□□□ 0.75
XPO6-212ENST00000567842 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
XPO6-212ENST00000567842 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
XPO6-212ENST00000567842 URB2Q14146 1524 aaKnown RBP19.59■□□□□ 0.73
XPO6-212ENST00000567842 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
XPO6-212ENST00000567842 OSCARQ8IYS5 282 aa19.42■□□□□ 0.7
XPO6-212ENST00000567842 IFT140Q96RY7 1462 aa19.4■□□□□ 0.7
XPO6-212ENST00000567842 TOPBP1Q92547 1522 aa19.39■□□□□ 0.69
XPO6-212ENST00000567842 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
XPO6-212ENST00000567842 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
XPO6-212ENST00000567842 ZNF608Q9ULD9 1512 aaPredicted RBP19.34■□□□□ 0.69
XPO6-212ENST00000567842 DNMBPQ6XZF7 1577 aa19.31■□□□□ 0.68
XPO6-212ENST00000567842 POLA1P09884 1462 aaPredicted RBP19.2■□□□□ 0.66
XPO6-212ENST00000567842 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
XPO6-212ENST00000567842 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
XPO6-212ENST00000567842 AQRO60306 1485 aaKnown RBP eCLIP19.18■□□□□ 0.661e-7■■■■■ 29.7
XPO6-212ENST00000567842 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
XPO6-212ENST00000567842 SOGA1O94964 1423 aa19.12■□□□□ 0.65
XPO6-212ENST00000567842 TDRD9Q8NDG6 1382 aaKnown RBP19.08■□□□□ 0.65
XPO6-212ENST00000567842 RIMBP3CA6NJZ7 1639 aa19.08■□□□□ 0.65
XPO6-212ENST00000567842 RIMBP3BA6NNM3 1639 aa19.08■□□□□ 0.65
XPO6-212ENST00000567842 RIMBP3Q9UFD9 1639 aa19.08■□□□□ 0.65
XPO6-212ENST00000567842 FGD5Q6ZNL6 1462 aa19.08■□□□□ 0.64
XPO6-212ENST00000567842 CUX1P39880 1505 aa19.07■□□□□ 0.64
XPO6-212ENST00000567842 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
XPO6-212ENST00000567842 ARHGEF11O15085 1522 aa19.06■□□□□ 0.64
XPO6-212ENST00000567842 FBLN2P98095 1184 aa19.05■□□□□ 0.64
XPO6-212ENST00000567842 WDR97A6NE52 1622 aa19.01■□□□□ 0.63
XPO6-212ENST00000567842 CHD1O14646 1710 aa19■□□□□ 0.63
XPO6-212ENST00000567842 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
XPO6-212ENST00000567842 GRIN2BQ13224 1484 aa18.95■□□□□ 0.62
XPO6-212ENST00000567842 MAGI1Q96QZ7 1491 aaPredicted RBP18.95■□□□□ 0.62
XPO6-212ENST00000567842 CYB5RLQ6IPT4 315 aa18.94■□□□□ 0.62
XPO6-212ENST00000567842 CHMP7Q8WUX9 453 aaPredicted RBP18.94■□□□□ 0.62
XPO6-212ENST00000567842 GAPVD1Q14C86 1478 aa18.89■□□□□ 0.61
XPO6-212ENST00000567842 ABCA10Q8WWZ4 1543 aa18.89■□□□□ 0.61
XPO6-212ENST00000567842 SYNJ2O15056 1496 aa18.88■□□□□ 0.61
XPO6-212ENST00000567842 ARAP1Q96P48 1450 aa18.88■□□□□ 0.61
XPO6-212ENST00000567842 CLASP1Q7Z460 1538 aa18.85■□□□□ 0.61
XPO6-212ENST00000567842 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
XPO6-212ENST00000567842 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.61
XPO6-212ENST00000567842 ABCA5Q8WWZ7 1642 aa18.81■□□□□ 0.6
XPO6-212ENST00000567842 PBRM1Q86U86 1689 aa18.79■□□□□ 0.6
XPO6-212ENST00000567842 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
XPO6-212ENST00000567842 BIVM-ERCC5R4GMW8 1640 aa18.74■□□□□ 0.59
XPO6-212ENST00000567842 TRHP20396 242 aaPredicted RBP18.7■□□□□ 0.58
XPO6-212ENST00000567842 GRIN2AQ12879 1464 aa18.7■□□□□ 0.58
XPO6-212ENST00000567842 ADAMTS12P58397 1594 aa18.67■□□□□ 0.58
XPO6-212ENST00000567842 FHAD1B1AJZ9 1412 aa18.66■□□□□ 0.58
XPO6-212ENST00000567842 NUP160Q12769 1436 aa18.66■□□□□ 0.58
XPO6-212ENST00000567842 ERICH3Q5RHP9 1530 aa18.64■□□□□ 0.57
XPO6-212ENST00000567842 CEP170Q5SW79 1584 aa18.59■□□□□ 0.57
XPO6-212ENST00000567842 ERCC6L2Q5T890 1561 aa18.55■□□□□ 0.56
XPO6-212ENST00000567842 SHROOM2Q13796 1616 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms