RNA–Protein interactions for RNA: ENST00000565199.1

AP003096.1-201, humanhuman

TSL 3 BASIC

Gene AP003096.1, Length 503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003096.1-201ENST00000565199 NISCHQ9Y2I1 1504 aa30.41■■■□□ 2.46
AP003096.1-201ENST00000565199 CCDC180Q9P1Z9 1646 aa27.21■■□□□ 1.95
AP003096.1-201ENST00000565199 ABCC9O60706 1549 aa27.08■■□□□ 1.93
AP003096.1-201ENST00000565199 AEBP2Q6ZN18 517 aaPredicted RBP26.25■■□□□ 1.79
AP003096.1-201ENST00000565199 RB1CC1Q8TDY2 1594 aa25.85■■□□□ 1.73
AP003096.1-201ENST00000565199 NACADO15069 1562 aa25.7■■□□□ 1.71
AP003096.1-201ENST00000565199 DCAF8L2P0C7V8 631 aa25.62■■□□□ 1.69
AP003096.1-201ENST00000565199 MYO15BQ96JP2 1530 aa25.41■■□□□ 1.66
AP003096.1-201ENST00000565199 DNAJC5BQ9UF47 199 aa25.27■■□□□ 1.64
AP003096.1-201ENST00000565199 PABPN1Q86U42 306 aaKnown RBP eCLIP25.24■■□□□ 1.63
AP003096.1-201ENST00000565199 ZCCHC6Q5VYS8 1495 aaKnown RBP25.23■■□□□ 1.63
AP003096.1-201ENST00000565199 UNC13AQ9UPW8 1703 aa25.21■■□□□ 1.63
AP003096.1-201ENST00000565199 DCAF1Q9Y4B6 1507 aa25.13■■□□□ 1.61
AP003096.1-201ENST00000565199 BICRAQ9NZM4 1560 aa25.07■■□□□ 1.6
AP003096.1-201ENST00000565199 SCRIBQ14160 1630 aa24.79■■□□□ 1.56
AP003096.1-201ENST00000565199 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
AP003096.1-201ENST00000565199 CHIC1Q5VXU3 224 aa24.6■■□□□ 1.53
AP003096.1-201ENST00000565199 CC2D2AQ9P2K1 1620 aa24.46■■□□□ 1.51
AP003096.1-201ENST00000565199 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
AP003096.1-201ENST00000565199 CECR2Q9BXF3 1484 aa24.38■■□□□ 1.49
AP003096.1-201ENST00000565199 NCAPD3P42695 1498 aa23.74■■□□□ 1.39
AP003096.1-201ENST00000565199 SMARCA4P51532 1647 aa23.68■■□□□ 1.38
AP003096.1-201ENST00000565199 ATAD2BQ9ULI0 1458 aa23.68■■□□□ 1.38
AP003096.1-201ENST00000565199 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
AP003096.1-201ENST00000565199 BAZ1AQ9NRL2 1556 aaPredicted RBP23.6■■□□□ 1.37
AP003096.1-201ENST00000565199 HMGXB3Q12766 1538 aa23.57■■□□□ 1.36
AP003096.1-201ENST00000565199 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
AP003096.1-201ENST00000565199 BAZ1BQ9UIG0 1483 aaKnown RBP23.46■■□□□ 1.35
AP003096.1-201ENST00000565199 MROH2BQ7Z745 1585 aa23.42■■□□□ 1.34
AP003096.1-201ENST00000565199 ERCC6Q03468 1493 aa23.38■■□□□ 1.33
AP003096.1-201ENST00000565199 NESP48681 1621 aa23.3■■□□□ 1.32
AP003096.1-201ENST00000565199 CUX2O14529 1486 aa23.29■■□□□ 1.32
AP003096.1-201ENST00000565199 LAMC3Q9Y6N6 1575 aa23.17■■□□□ 1.3
AP003096.1-201ENST00000565199 WIZO95785 1651 aa23.14■■□□□ 1.29
AP003096.1-201ENST00000565199 DNAJC5Q9H3Z4 198 aa23.11■■□□□ 1.29
AP003096.1-201ENST00000565199 PDS5BQ9NTI5 1447 aa23.05■■□□□ 1.28
AP003096.1-201ENST00000565199 CADPSQ9ULU8 1353 aa23.02■■□□□ 1.28
AP003096.1-201ENST00000565199 THOC2Q8NI27 1593 aaKnown RBP23.02■■□□□ 1.28
AP003096.1-201ENST00000565199 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
AP003096.1-201ENST00000565199 KIF21AQ7Z4S6 1674 aa22.99■■□□□ 1.27
AP003096.1-201ENST00000565199 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
AP003096.1-201ENST00000565199 MRC2Q9UBG0 1479 aa22.83■■□□□ 1.25
AP003096.1-201ENST00000565199 CFTRP13569 1480 aa22.79■■□□□ 1.24
AP003096.1-201ENST00000565199 CEP164Q9UPV0 1460 aa22.77■■□□□ 1.24
AP003096.1-201ENST00000565199 WDR62O43379 1518 aa22.77■■□□□ 1.24
AP003096.1-201ENST00000565199 FANCD2Q9BXW9 1451 aa22.75■■□□□ 1.23
AP003096.1-201ENST00000565199 CCDC88BA6NC98 1476 aa22.61■■□□□ 1.21
AP003096.1-201ENST00000565199 SENP3Q9H4L4 574 aaPredicted RBP22.57■■□□□ 1.2
AP003096.1-201ENST00000565199 URB2Q14146 1524 aaKnown RBP22.55■■□□□ 1.2
AP003096.1-201ENST00000565199 PRDM2Q13029 1718 aa22.54■■□□□ 1.2
AP003096.1-201ENST00000565199 TOPBP1Q92547 1522 aa22.33■■□□□ 1.17
AP003096.1-201ENST00000565199 ABCC8Q09428 1581 aa22.31■■□□□ 1.16
AP003096.1-201ENST00000565199 IFT140Q96RY7 1462 aa22.31■■□□□ 1.16
AP003096.1-201ENST00000565199 OSCARQ8IYS5 282 aa22.27■■□□□ 1.16
AP003096.1-201ENST00000565199 DNMBPQ6XZF7 1577 aa22.26■■□□□ 1.15
AP003096.1-201ENST00000565199 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
AP003096.1-201ENST00000565199 PHF23Q9BUL5 403 aaPredicted RBP22.17■■□□□ 1.14
AP003096.1-201ENST00000565199 TRIM41Q8WV44 630 aa22.16■■□□□ 1.14
AP003096.1-201ENST00000565199 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
AP003096.1-201ENST00000565199 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
AP003096.1-201ENST00000565199 TARBP1Q13395 1621 aaKnown RBP22.12■■□□□ 1.13
AP003096.1-201ENST00000565199 SUPT5HO00267 1087 aaKnown RBP22.1■■□□□ 1.13
AP003096.1-201ENST00000565199 AQRO60306 1485 aaKnown RBP eCLIP22.08■■□□□ 1.12
AP003096.1-201ENST00000565199 RAD54L2Q9Y4B4 1467 aa22.03■■□□□ 1.12
AP003096.1-201ENST00000565199 SOGA1O94964 1423 aa22.03■■□□□ 1.12
AP003096.1-201ENST00000565199 FGD5Q6ZNL6 1462 aa22■■□□□ 1.11
AP003096.1-201ENST00000565199 CUX1P39880 1505 aa21.99■■□□□ 1.11
AP003096.1-201ENST00000565199 TDRD9Q8NDG6 1382 aaKnown RBP21.97■■□□□ 1.11
AP003096.1-201ENST00000565199 RIMBP3CA6NJZ7 1639 aa21.92■■□□□ 1.1
AP003096.1-201ENST00000565199 RIMBP3BA6NNM3 1639 aa21.92■■□□□ 1.1
AP003096.1-201ENST00000565199 RIMBP3Q9UFD9 1639 aa21.92■■□□□ 1.1
AP003096.1-201ENST00000565199 CHD1O14646 1710 aa21.92■■□□□ 1.1
AP003096.1-201ENST00000565199 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
AP003096.1-201ENST00000565199 FBLN2P98095 1184 aa21.91■■□□□ 1.1
AP003096.1-201ENST00000565199 ARHGEF11O15085 1522 aa21.89■■□□□ 1.09
AP003096.1-201ENST00000565199 SNAPC4Q5SXM2 1469 aa21.84■■□□□ 1.09
AP003096.1-201ENST00000565199 GRIN2BQ13224 1484 aa21.82■■□□□ 1.08
AP003096.1-201ENST00000565199 MAGI1Q96QZ7 1491 aaPredicted RBP21.8■■□□□ 1.08
AP003096.1-201ENST00000565199 CHMP7Q8WUX9 453 aaPredicted RBP21.78■■□□□ 1.08
AP003096.1-201ENST00000565199 ABCA10Q8WWZ4 1543 aa21.76■■□□□ 1.07
AP003096.1-201ENST00000565199 GAPVD1Q14C86 1478 aa21.76■■□□□ 1.07
AP003096.1-201ENST00000565199 SYNJ2O15056 1496 aa21.73■■□□□ 1.07
AP003096.1-201ENST00000565199 CYB5RLQ6IPT4 315 aa21.73■■□□□ 1.07
AP003096.1-201ENST00000565199 PBRM1Q86U86 1689 aa21.72■■□□□ 1.07
AP003096.1-201ENST00000565199 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
AP003096.1-201ENST00000565199 SYNJ1O43426 1573 aa21.7■■□□□ 1.06
AP003096.1-201ENST00000565199 ABCA5Q8WWZ7 1642 aa21.7■■□□□ 1.06
AP003096.1-201ENST00000565199 CLASP1Q7Z460 1538 aa21.69■■□□□ 1.06
AP003096.1-201ENST00000565199 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
AP003096.1-201ENST00000565199 BIVM-ERCC5R4GMW8 1640 aa21.68■■□□□ 1.06
AP003096.1-201ENST00000565199 ARAP1Q96P48 1450 aa21.67■■□□□ 1.06
AP003096.1-201ENST00000565199 GRIN2AQ12879 1464 aa21.54■■□□□ 1.04
AP003096.1-201ENST00000565199 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
AP003096.1-201ENST00000565199 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
AP003096.1-201ENST00000565199 FHAD1B1AJZ9 1412 aa21.49■■□□□ 1.03
AP003096.1-201ENST00000565199 NUP160Q12769 1436 aa21.46■■□□□ 1.03
AP003096.1-201ENST00000565199 TRHP20396 242 aaPredicted RBP21.45■■□□□ 1.02
AP003096.1-201ENST00000565199 CEP170Q5SW79 1584 aa21.44■■□□□ 1.02
AP003096.1-201ENST00000565199 ERCC6L2Q5T890 1561 aa21.36■■□□□ 1.01
AP003096.1-201ENST00000565199 SHROOM2Q13796 1616 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms