RNA–Protein interactions for RNA: ENST00000564594.1

HMGN2P46-206, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 4

Gene HMGN2P46, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-206ENST00000564594 NISCHQ9Y2I1 1504 aa26.63■■□□□ 1.85
HMGN2P46-206ENST00000564594 ABCC9O60706 1549 aa24.07■■□□□ 1.44
HMGN2P46-206ENST00000564594 CCDC180Q9P1Z9 1646 aa23.93■■□□□ 1.42
HMGN2P46-206ENST00000564594 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
HMGN2P46-206ENST00000564594 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
HMGN2P46-206ENST00000564594 DNAJC5BQ9UF47 199 aa22.77■■□□□ 1.24
HMGN2P46-206ENST00000564594 NACADO15069 1562 aa22.68■■□□□ 1.22
HMGN2P46-206ENST00000564594 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
HMGN2P46-206ENST00000564594 DCAF8L2P0C7V8 631 aa22.44■■□□□ 1.18
HMGN2P46-206ENST00000564594 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.17
HMGN2P46-206ENST00000564594 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
HMGN2P46-206ENST00000564594 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
HMGN2P46-206ENST00000564594 BICRAQ9NZM4 1560 aa22.23■■□□□ 1.15
HMGN2P46-206ENST00000564594 ZCCHC6Q5VYS8 1495 aaKnown RBP22.04■■□□□ 1.12
HMGN2P46-206ENST00000564594 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
HMGN2P46-206ENST00000564594 SHROOM4Q9ULL8 1493 aa21.93■■□□□ 1.1
HMGN2P46-206ENST00000564594 SCRIBQ14160 1630 aa21.77■■□□□ 1.08
HMGN2P46-206ENST00000564594 CC2D2AQ9P2K1 1620 aa21.74■■□□□ 1.07
HMGN2P46-206ENST00000564594 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
HMGN2P46-206ENST00000564594 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
HMGN2P46-206ENST00000564594 DNAJC5Q9H3Z4 198 aa21.01■□□□□ 0.95
HMGN2P46-206ENST00000564594 NCAPD3P42695 1498 aa20.97■□□□□ 0.95
HMGN2P46-206ENST00000564594 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
HMGN2P46-206ENST00000564594 CUX2O14529 1486 aa20.84■□□□□ 0.93
HMGN2P46-206ENST00000564594 SMARCA4P51532 1647 aa20.79■□□□□ 0.92
HMGN2P46-206ENST00000564594 SMARCA2P51531 1590 aa20.78■□□□□ 0.92
HMGN2P46-206ENST00000564594 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
HMGN2P46-206ENST00000564594 ERCC6Q03468 1493 aa20.77■□□□□ 0.92
HMGN2P46-206ENST00000564594 BAZ1AQ9NRL2 1556 aaPredicted RBP20.66■□□□□ 0.9
HMGN2P46-206ENST00000564594 NESP48681 1621 aa20.65■□□□□ 0.9
HMGN2P46-206ENST00000564594 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
HMGN2P46-206ENST00000564594 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
HMGN2P46-206ENST00000564594 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
HMGN2P46-206ENST00000564594 THOC2Q8NI27 1593 aaKnown RBP20.48■□□□□ 0.87
HMGN2P46-206ENST00000564594 LAMC3Q9Y6N6 1575 aa20.47■□□□□ 0.87
HMGN2P46-206ENST00000564594 PDS5BQ9NTI5 1447 aa20.37■□□□□ 0.85
HMGN2P46-206ENST00000564594 KIF21AQ7Z4S6 1674 aa20.34■□□□□ 0.85
HMGN2P46-206ENST00000564594 CADPSQ9ULU8 1353 aa20.31■□□□□ 0.84
HMGN2P46-206ENST00000564594 WIZO95785 1651 aa20.22■□□□□ 0.83
HMGN2P46-206ENST00000564594 MRC2Q9UBG0 1479 aa20.21■□□□□ 0.83
HMGN2P46-206ENST00000564594 WDR62O43379 1518 aa20.17■□□□□ 0.82
HMGN2P46-206ENST00000564594 CEP164Q9UPV0 1460 aa20.08■□□□□ 0.81
HMGN2P46-206ENST00000564594 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
HMGN2P46-206ENST00000564594 CFTRP13569 1480 aa20.05■□□□□ 0.8
HMGN2P46-206ENST00000564594 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
HMGN2P46-206ENST00000564594 TOP2AP11388 1531 aaKnown RBP19.98■□□□□ 0.79
HMGN2P46-206ENST00000564594 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
HMGN2P46-206ENST00000564594 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
HMGN2P46-206ENST00000564594 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
HMGN2P46-206ENST00000564594 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
HMGN2P46-206ENST00000564594 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
HMGN2P46-206ENST00000564594 PHF23Q9BUL5 403 aaPredicted RBP19.75■□□□□ 0.75
HMGN2P46-206ENST00000564594 IFT140Q96RY7 1462 aa19.7■□□□□ 0.74
HMGN2P46-206ENST00000564594 ZNF608Q9ULD9 1512 aaPredicted RBP19.69■□□□□ 0.74
HMGN2P46-206ENST00000564594 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
HMGN2P46-206ENST00000564594 SENP3Q9H4L4 574 aaPredicted RBP19.64■□□□□ 0.73
HMGN2P46-206ENST00000564594 ABCC8Q09428 1581 aa19.6■□□□□ 0.73
HMGN2P46-206ENST00000564594 RIMBP3CA6NJZ7 1639 aa19.59■□□□□ 0.73
HMGN2P46-206ENST00000564594 RIMBP3BA6NNM3 1639 aa19.59■□□□□ 0.73
HMGN2P46-206ENST00000564594 RIMBP3Q9UFD9 1639 aa19.59■□□□□ 0.73
HMGN2P46-206ENST00000564594 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
HMGN2P46-206ENST00000564594 EIF4G3O43432 1585 aaKnown RBP19.55■□□□□ 0.72
HMGN2P46-206ENST00000564594 ARHGEF11O15085 1522 aa19.53■□□□□ 0.72
HMGN2P46-206ENST00000564594 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
HMGN2P46-206ENST00000564594 AQRO60306 1485 aaKnown RBP eCLIP19.49■□□□□ 0.71
HMGN2P46-206ENST00000564594 POLA1P09884 1462 aaPredicted RBP19.47■□□□□ 0.71
HMGN2P46-206ENST00000564594 CHD1O14646 1710 aa19.41■□□□□ 0.7
HMGN2P46-206ENST00000564594 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
HMGN2P46-206ENST00000564594 CYB5RLQ6IPT4 315 aa19.37■□□□□ 0.69
HMGN2P46-206ENST00000564594 SOGA1O94964 1423 aa19.36■□□□□ 0.69
HMGN2P46-206ENST00000564594 ARAP1Q96P48 1450 aa19.35■□□□□ 0.69
HMGN2P46-206ENST00000564594 TDRD9Q8NDG6 1382 aaKnown RBP19.33■□□□□ 0.69
HMGN2P46-206ENST00000564594 FBLN2P98095 1184 aa19.33■□□□□ 0.68
HMGN2P46-206ENST00000564594 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
HMGN2P46-206ENST00000564594 WDR97A6NE52 1622 aa19.3■□□□□ 0.68
HMGN2P46-206ENST00000564594 CUX1P39880 1505 aa19.28■□□□□ 0.68
HMGN2P46-206ENST00000564594 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
HMGN2P46-206ENST00000564594 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
HMGN2P46-206ENST00000564594 MAGI1Q96QZ7 1491 aaPredicted RBP19.23■□□□□ 0.67
HMGN2P46-206ENST00000564594 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
HMGN2P46-206ENST00000564594 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
HMGN2P46-206ENST00000564594 SYNJ1O43426 1573 aa19.18■□□□□ 0.66
HMGN2P46-206ENST00000564594 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
HMGN2P46-206ENST00000564594 TRHP20396 242 aaPredicted RBP19.16■□□□□ 0.66
HMGN2P46-206ENST00000564594 GAPVD1Q14C86 1478 aa19.12■□□□□ 0.65
HMGN2P46-206ENST00000564594 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
HMGN2P46-206ENST00000564594 PBRM1Q86U86 1689 aa19.08■□□□□ 0.64
HMGN2P46-206ENST00000564594 ABCA5Q8WWZ7 1642 aa19.07■□□□□ 0.64
HMGN2P46-206ENST00000564594 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.63
HMGN2P46-206ENST00000564594 GRIN2AQ12879 1464 aa18.97■□□□□ 0.63
HMGN2P46-206ENST00000564594 SUPT5HO00267 1087 aaKnown RBP18.97■□□□□ 0.63
HMGN2P46-206ENST00000564594 NUP160Q12769 1436 aa18.94■□□□□ 0.62
HMGN2P46-206ENST00000564594 ADAMTS12P58397 1594 aa18.93■□□□□ 0.62
HMGN2P46-206ENST00000564594 ERCC6L2Q5T890 1561 aa18.93■□□□□ 0.62
HMGN2P46-206ENST00000564594 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
HMGN2P46-206ENST00000564594 BIVM-ERCC5R4GMW8 1640 aa18.91■□□□□ 0.62
HMGN2P46-206ENST00000564594 CEP170Q5SW79 1584 aa18.9■□□□□ 0.62
HMGN2P46-206ENST00000564594 FHAD1B1AJZ9 1412 aa18.89■□□□□ 0.61
HMGN2P46-206ENST00000564594 SHROOM2Q13796 1616 aa18.85■□□□□ 0.61
HMGN2P46-206ENST00000564594 ERICH3Q5RHP9 1530 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms