RNA–Protein interactions for RNA: ENST00000564413.1

RSRP1-211, Transcript of arginine and serine rich protein 1, humanhuman

TSL 4

Gene RSRP1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-211ENST00000564413 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
RSRP1-211ENST00000564413 ABCC9O60706 1549 aa27.06■■□□□ 1.92
RSRP1-211ENST00000564413 CCDC180Q9P1Z9 1646 aa26.94■■□□□ 1.9
RSRP1-211ENST00000564413 RB1CC1Q8TDY2 1594 aa25.65■■□□□ 1.7
RSRP1-211ENST00000564413 NACADO15069 1562 aa25.43■■□□□ 1.66
RSRP1-211ENST00000564413 DNAJC5BQ9UF47 199 aa25.39■■□□□ 1.66
RSRP1-211ENST00000564413 DCAF8L2P0C7V8 631 aa25.35■■□□□ 1.65
RSRP1-211ENST00000564413 UNC13AQ9UPW8 1703 aa25.17■■□□□ 1.62
RSRP1-211ENST00000564413 PABPN1Q86U42 306 aaKnown RBP eCLIP25.16■■□□□ 1.62
RSRP1-211ENST00000564413 MYO15BQ96JP2 1530 aa24.98■■□□□ 1.59
RSRP1-211ENST00000564413 BICRAQ9NZM4 1560 aa24.96■■□□□ 1.59
RSRP1-211ENST00000564413 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.57
RSRP1-211ENST00000564413 DCAF1Q9Y4B6 1507 aa24.67■■□□□ 1.54
RSRP1-211ENST00000564413 SCRIBQ14160 1630 aa24.64■■□□□ 1.53
RSRP1-211ENST00000564413 SHROOM4Q9ULL8 1493 aa24.48■■□□□ 1.51
RSRP1-211ENST00000564413 CC2D2AQ9P2K1 1620 aa24.43■■□□□ 1.5
RSRP1-211ENST00000564413 EIF4G1Q04637 1599 aaKnown RBP24.34■■□□□ 1.49
RSRP1-211ENST00000564413 CECR2Q9BXF3 1484 aa24.33■■□□□ 1.49
RSRP1-211ENST00000564413 CHIC1Q5VXU3 224 aa24.31■■□□□ 1.48
RSRP1-211ENST00000564413 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
RSRP1-211ENST00000564413 NCAPD3P42695 1498 aa23.45■■□□□ 1.34
RSRP1-211ENST00000564413 SMARCA4P51532 1647 aa23.43■■□□□ 1.34
RSRP1-211ENST00000564413 ATAD2BQ9ULI0 1458 aa23.42■■□□□ 1.34
RSRP1-211ENST00000564413 ERCC6Q03468 1493 aa23.34■■□□□ 1.33
RSRP1-211ENST00000564413 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
RSRP1-211ENST00000564413 HMGXB3Q12766 1538 aa23.32■■□□□ 1.32
RSRP1-211ENST00000564413 DNAJC5Q9H3Z4 198 aa23.28■■□□□ 1.32
RSRP1-211ENST00000564413 CUX2O14529 1486 aa23.25■■□□□ 1.31
RSRP1-211ENST00000564413 BAZ1AQ9NRL2 1556 aaPredicted RBP23.25■■□□□ 1.31
RSRP1-211ENST00000564413 NESP48681 1621 aa23.24■■□□□ 1.31
RSRP1-211ENST00000564413 BAZ1BQ9UIG0 1483 aaKnown RBP23.22■■□□□ 1.31
RSRP1-211ENST00000564413 MROH2BQ7Z745 1585 aa23.14■■□□□ 1.29
RSRP1-211ENST00000564413 PEG3Q9GZU2 1588 aa23.13■■□□□ 1.29
RSRP1-211ENST00000564413 THOC2Q8NI27 1593 aaKnown RBP23.01■■□□□ 1.27
RSRP1-211ENST00000564413 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
RSRP1-211ENST00000564413 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
RSRP1-211ENST00000564413 WIZO95785 1651 aa22.89■■□□□ 1.25
RSRP1-211ENST00000564413 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
RSRP1-211ENST00000564413 CADPSQ9ULU8 1353 aa22.75■■□□□ 1.23
RSRP1-211ENST00000564413 MRC2Q9UBG0 1479 aa22.68■■□□□ 1.22
RSRP1-211ENST00000564413 WDR62O43379 1518 aa22.63■■□□□ 1.21
RSRP1-211ENST00000564413 CEP164Q9UPV0 1460 aa22.59■■□□□ 1.21
RSRP1-211ENST00000564413 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.21
RSRP1-211ENST00000564413 FANCD2Q9BXW9 1451 aa22.55■■□□□ 1.2
RSRP1-211ENST00000564413 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
RSRP1-211ENST00000564413 CFTRP13569 1480 aa22.49■■□□□ 1.19
RSRP1-211ENST00000564413 URB2Q14146 1524 aaKnown RBP22.4■■□□□ 1.18
RSRP1-211ENST00000564413 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
RSRP1-211ENST00000564413 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
RSRP1-211ENST00000564413 CCDC88BA6NC98 1476 aa22.28■■□□□ 1.16
RSRP1-211ENST00000564413 ZNF608Q9ULD9 1512 aaPredicted RBP22.15■■□□□ 1.14
RSRP1-211ENST00000564413 OSCARQ8IYS5 282 aa22.13■■□□□ 1.13
RSRP1-211ENST00000564413 TOPBP1Q92547 1522 aa22.12■■□□□ 1.13
RSRP1-211ENST00000564413 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
RSRP1-211ENST00000564413 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
RSRP1-211ENST00000564413 DNMBPQ6XZF7 1577 aa22.04■■□□□ 1.12
RSRP1-211ENST00000564413 RIMBP3CA6NJZ7 1639 aa21.99■■□□□ 1.11
RSRP1-211ENST00000564413 RIMBP3BA6NNM3 1639 aa21.99■■□□□ 1.11
RSRP1-211ENST00000564413 RIMBP3Q9UFD9 1639 aa21.99■■□□□ 1.11
RSRP1-211ENST00000564413 ABCC8Q09428 1581 aa21.97■■□□□ 1.11
RSRP1-211ENST00000564413 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
RSRP1-211ENST00000564413 CHD1O14646 1710 aa21.92■■□□□ 1.1
RSRP1-211ENST00000564413 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.1
RSRP1-211ENST00000564413 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
RSRP1-211ENST00000564413 ARHGEF11O15085 1522 aa21.89■■□□□ 1.09
RSRP1-211ENST00000564413 RAD54L2Q9Y4B4 1467 aa21.84■■□□□ 1.09
RSRP1-211ENST00000564413 FBLN2P98095 1184 aa21.77■■□□□ 1.08
RSRP1-211ENST00000564413 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.07
RSRP1-211ENST00000564413 TDRD9Q8NDG6 1382 aaKnown RBP21.75■■□□□ 1.07
RSRP1-211ENST00000564413 SOGA1O94964 1423 aa21.75■■□□□ 1.07
RSRP1-211ENST00000564413 CUX1P39880 1505 aa21.75■■□□□ 1.07
RSRP1-211ENST00000564413 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
RSRP1-211ENST00000564413 CYB5RLQ6IPT4 315 aa21.69■■□□□ 1.06
RSRP1-211ENST00000564413 ARAP1Q96P48 1450 aa21.69■■□□□ 1.06
RSRP1-211ENST00000564413 WDR97A6NE52 1622 aa21.65■■□□□ 1.06
RSRP1-211ENST00000564413 CLASP1Q7Z460 1538 aa21.6■■□□□ 1.05
RSRP1-211ENST00000564413 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
RSRP1-211ENST00000564413 SUPT5HO00267 1087 aaKnown RBP21.58■■□□□ 1.05
RSRP1-211ENST00000564413 GRIN2BQ13224 1484 aa21.58■■□□□ 1.04
RSRP1-211ENST00000564413 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.04
RSRP1-211ENST00000564413 PHF23Q9BUL5 403 aaPredicted RBP21.57■■□□□ 1.04
RSRP1-211ENST00000564413 SYNJ1O43426 1573 aa21.56■■□□□ 1.04
RSRP1-211ENST00000564413 CHMP7Q8WUX9 453 aaPredicted RBP21.54■■□□□ 1.04
RSRP1-211ENST00000564413 SYNJ2O15056 1496 aa21.52■■□□□ 1.04
RSRP1-211ENST00000564413 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
RSRP1-211ENST00000564413 TRHP20396 242 aaPredicted RBP21.5■■□□□ 1.03
RSRP1-211ENST00000564413 ABCA5Q8WWZ7 1642 aa21.5■■□□□ 1.03
RSRP1-211ENST00000564413 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
RSRP1-211ENST00000564413 BIVM-ERCC5R4GMW8 1640 aa21.37■■□□□ 1.01
RSRP1-211ENST00000564413 ADAMTS12P58397 1594 aa21.36■■□□□ 1.01
RSRP1-211ENST00000564413 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
RSRP1-211ENST00000564413 WRNQ14191 1432 aaPredicted RBP eCLIP21.34■■□□□ 1.01
RSRP1-211ENST00000564413 GRIN2AQ12879 1464 aa21.32■■□□□ 1
RSRP1-211ENST00000564413 ERCC6L2Q5T890 1561 aa21.32■■□□□ 1
RSRP1-211ENST00000564413 CEP170Q5SW79 1584 aa21.31■■□□□ 1
RSRP1-211ENST00000564413 NUP160Q12769 1436 aa21.22■□□□□ 0.99
RSRP1-211ENST00000564413 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
RSRP1-211ENST00000564413 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
RSRP1-211ENST00000564413 SHROOM2Q13796 1616 aa21.18■□□□□ 0.98
RSRP1-211ENST00000564413 RUSC2Q8N2Y8 1516 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms