RNA–Protein interactions for RNA: ENST00000563951.1

CCDC33-211, Transcript of coiled-coil domain containing 33, humanhuman

TSL 5

Gene CCDC33, Length 308 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-211ENST00000563951 NISCHQ9Y2I1 1504 aa21.01■□□□□ 0.95
CCDC33-211ENST00000563951 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
CCDC33-211ENST00000563951 ABCC9O60706 1549 aa18.28■□□□□ 0.52
CCDC33-211ENST00000563951 CHIC1Q5VXU3 224 aa17.66■□□□□ 0.42
CCDC33-211ENST00000563951 RB1CC1Q8TDY2 1594 aa17.55■□□□□ 0.4
CCDC33-211ENST00000563951 ZCCHC6Q5VYS8 1495 aaKnown RBP17.55■□□□□ 0.4
CCDC33-211ENST00000563951 NACADO15069 1562 aa17.54■□□□□ 0.4
CCDC33-211ENST00000563951 MYO15BQ96JP2 1530 aa17.46■□□□□ 0.39
CCDC33-211ENST00000563951 DCAF8L2P0C7V8 631 aa17.39■□□□□ 0.37
CCDC33-211ENST00000563951 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
CCDC33-211ENST00000563951 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
CCDC33-211ENST00000563951 UNC13AQ9UPW8 1703 aa17.23■□□□□ 0.35
CCDC33-211ENST00000563951 BICRAQ9NZM4 1560 aa17.12■□□□□ 0.33
CCDC33-211ENST00000563951 SCRIBQ14160 1630 aa17.06■□□□□ 0.32
CCDC33-211ENST00000563951 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCDC33-211ENST00000563951 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
CCDC33-211ENST00000563951 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
CCDC33-211ENST00000563951 EIF4G1Q04637 1599 aaKnown RBP16.62■□□□□ 0.25
CCDC33-211ENST00000563951 CC2D2AQ9P2K1 1620 aa16.55■□□□□ 0.24
CCDC33-211ENST00000563951 CECR2Q9BXF3 1484 aa16.42■□□□□ 0.22
CCDC33-211ENST00000563951 SMARCA4P51532 1647 aa16.32■□□□□ 0.2
CCDC33-211ENST00000563951 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
CCDC33-211ENST00000563951 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
CCDC33-211ENST00000563951 MROH2BQ7Z745 1585 aa16.22■□□□□ 0.19
CCDC33-211ENST00000563951 NCAPD3P42695 1498 aa16.2■□□□□ 0.18
CCDC33-211ENST00000563951 PEG3Q9GZU2 1588 aa16.17■□□□□ 0.18
CCDC33-211ENST00000563951 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
CCDC33-211ENST00000563951 HMGXB3Q12766 1538 aa16.14■□□□□ 0.17
CCDC33-211ENST00000563951 BAZ1BQ9UIG0 1483 aaKnown RBP16.05■□□□□ 0.16
CCDC33-211ENST00000563951 WIZO95785 1651 aa16.03■□□□□ 0.16
CCDC33-211ENST00000563951 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
CCDC33-211ENST00000563951 TOP2AP11388 1531 aaKnown RBP15.86■□□□□ 0.13
CCDC33-211ENST00000563951 NESP48681 1621 aa15.85■□□□□ 0.13
CCDC33-211ENST00000563951 LAMC3Q9Y6N6 1575 aa15.75■□□□□ 0.11
CCDC33-211ENST00000563951 CADPSQ9ULU8 1353 aa15.7■□□□□ 0.1
CCDC33-211ENST00000563951 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
CCDC33-211ENST00000563951 KIF21AQ7Z4S6 1674 aa15.66■□□□□ 0.1
CCDC33-211ENST00000563951 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
CCDC33-211ENST00000563951 THOC2Q8NI27 1593 aaKnown RBP15.65■□□□□ 0.1
CCDC33-211ENST00000563951 PHF23Q9BUL5 403 aaPredicted RBP15.64■□□□□ 0.09
CCDC33-211ENST00000563951 CFTRP13569 1480 aa15.64■□□□□ 0.09
CCDC33-211ENST00000563951 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
CCDC33-211ENST00000563951 CUX2O14529 1486 aa15.58■□□□□ 0.08
CCDC33-211ENST00000563951 FANCD2Q9BXW9 1451 aa15.54■□□□□ 0.08
CCDC33-211ENST00000563951 PRDM2Q13029 1718 aa15.53■□□□□ 0.08
CCDC33-211ENST00000563951 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.07
CCDC33-211ENST00000563951 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
CCDC33-211ENST00000563951 WDR62O43379 1518 aa15.49■□□□□ 0.07
CCDC33-211ENST00000563951 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
CCDC33-211ENST00000563951 URB2Q14146 1524 aaKnown RBP15.43■□□□□ 0.06
CCDC33-211ENST00000563951 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
CCDC33-211ENST00000563951 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
CCDC33-211ENST00000563951 CUX1P39880 1505 aa15.22■□□□□ 0.03
CCDC33-211ENST00000563951 ABCC8Q09428 1581 aa15.22■□□□□ 0.03
CCDC33-211ENST00000563951 POLA1P09884 1462 aaPredicted RBP15.19■□□□□ 0.02
CCDC33-211ENST00000563951 IFT140Q96RY7 1462 aa15.19■□□□□ 0.02
CCDC33-211ENST00000563951 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
CCDC33-211ENST00000563951 TARBP1Q13395 1621 aaKnown RBP15.17■□□□□ 0.02
CCDC33-211ENST00000563951 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
CCDC33-211ENST00000563951 RAD54L2Q9Y4B4 1467 aa15.12■□□□□ 0.01
CCDC33-211ENST00000563951 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
CCDC33-211ENST00000563951 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
CCDC33-211ENST00000563951 WDR97A6NE52 1622 aa15.07■□□□□ 0
CCDC33-211ENST00000563951 BIVM-ERCC5R4GMW8 1640 aa15.07■□□□□ 0
CCDC33-211ENST00000563951 DNAJC5Q9H3Z4 198 aa15.06■□□□□ 0
CCDC33-211ENST00000563951 SOGA1O94964 1423 aa15.06■□□□□ 0
CCDC33-211ENST00000563951 WRNQ14191 1432 aaPredicted RBP eCLIP15.06■□□□□ 0
CCDC33-211ENST00000563951 TOP2BQ02880 1626 aa15.06■□□□□ 0
CCDC33-211ENST00000563951 AQRO60306 1485 aaKnown RBP eCLIP15.04■□□□□ -0
CCDC33-211ENST00000563951 ABCA10Q8WWZ4 1543 aa15□□□□□ -0.01
CCDC33-211ENST00000563951 TDRD9Q8NDG6 1382 aaKnown RBP14.99□□□□□ -0.01
CCDC33-211ENST00000563951 ABCA5Q8WWZ7 1642 aa14.98□□□□□ -0.01
CCDC33-211ENST00000563951 SNAPC4Q5SXM2 1469 aa14.93□□□□□ -0.02
CCDC33-211ENST00000563951 PBRM1Q86U86 1689 aa14.92□□□□□ -0.02
CCDC33-211ENST00000563951 CHD1O14646 1710 aa14.91□□□□□ -0.02
CCDC33-211ENST00000563951 GRIN2BQ13224 1484 aa14.9□□□□□ -0.02
CCDC33-211ENST00000563951 GAPVD1Q14C86 1478 aa14.9□□□□□ -0.02
CCDC33-211ENST00000563951 MAGI1Q96QZ7 1491 aaPredicted RBP14.88□□□□□ -0.03
CCDC33-211ENST00000563951 ADAMTS12P58397 1594 aa14.83□□□□□ -0.04
CCDC33-211ENST00000563951 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
CCDC33-211ENST00000563951 SYNJ2O15056 1496 aa14.82□□□□□ -0.04
CCDC33-211ENST00000563951 ERICH3Q5RHP9 1530 aa14.79□□□□□ -0.04
CCDC33-211ENST00000563951 CLASP1Q7Z460 1538 aa14.77□□□□□ -0.04
CCDC33-211ENST00000563951 FBLN2P98095 1184 aa14.75□□□□□ -0.05
CCDC33-211ENST00000563951 GRIN2AQ12879 1464 aa14.74□□□□□ -0.05
CCDC33-211ENST00000563951 FHAD1B1AJZ9 1412 aa14.74□□□□□ -0.05
CCDC33-211ENST00000563951 CHMP7Q8WUX9 453 aaPredicted RBP14.72□□□□□ -0.05
CCDC33-211ENST00000563951 RIMBP3CA6NJZ7 1639 aa14.72□□□□□ -0.05
CCDC33-211ENST00000563951 RIMBP3BA6NNM3 1639 aa14.72□□□□□ -0.05
CCDC33-211ENST00000563951 RIMBP3Q9UFD9 1639 aa14.72□□□□□ -0.05
CCDC33-211ENST00000563951 KIF27Q86VH2 1401 aa14.72□□□□□ -0.05
CCDC33-211ENST00000563951 ARHGEF11O15085 1522 aa14.71□□□□□ -0.05
CCDC33-211ENST00000563951 CEP170Q5SW79 1584 aa14.71□□□□□ -0.05
CCDC33-211ENST00000563951 NUP160Q12769 1436 aa14.7□□□□□ -0.06
CCDC33-211ENST00000563951 PLPPR3Q6T4P5 718 aa14.7□□□□□ -0.06
CCDC33-211ENST00000563951 IGF1RP08069 1367 aa14.69□□□□□ -0.06
CCDC33-211ENST00000563951 RUSC2Q8N2Y8 1516 aa14.66□□□□□ -0.06
CCDC33-211ENST00000563951 CUL7Q14999 1698 aa14.65□□□□□ -0.06
CCDC33-211ENST00000563951 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
CCDC33-211ENST00000563951 SHROOM2Q13796 1616 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms