RNA–Protein interactions for RNA: ENST00000563903.1

SOD1P2-201, Transcript of superoxide dismutase 1 pseudogene 2, humanhuman

BASIC

Gene SOD1P2, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P2-201ENST00000563903 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
SOD1P2-201ENST00000563903 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
SOD1P2-201ENST00000563903 ABCC9O60706 1549 aa18.14■□□□□ 0.49
SOD1P2-201ENST00000563903 AEBP2Q6ZN18 517 aaPredicted RBP17.81■□□□□ 0.44
SOD1P2-201ENST00000563903 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
SOD1P2-201ENST00000563903 RB1CC1Q8TDY2 1594 aa17.38■□□□□ 0.37
SOD1P2-201ENST00000563903 NACADO15069 1562 aa17.28■□□□□ 0.36
SOD1P2-201ENST00000563903 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
SOD1P2-201ENST00000563903 MYO15BQ96JP2 1530 aa17.11■□□□□ 0.33
SOD1P2-201ENST00000563903 UNC13AQ9UPW8 1703 aa16.93■□□□□ 0.3
SOD1P2-201ENST00000563903 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
SOD1P2-201ENST00000563903 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
SOD1P2-201ENST00000563903 DCAF1Q9Y4B6 1507 aa16.9■□□□□ 0.3
SOD1P2-201ENST00000563903 PABPN1Q86U42 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
SOD1P2-201ENST00000563903 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
SOD1P2-201ENST00000563903 SHROOM4Q9ULL8 1493 aa16.72■□□□□ 0.27
SOD1P2-201ENST00000563903 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
SOD1P2-201ENST00000563903 CC2D2AQ9P2K1 1620 aa16.42■□□□□ 0.22
SOD1P2-201ENST00000563903 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
SOD1P2-201ENST00000563903 CECR2Q9BXF3 1484 aa16.37■□□□□ 0.21
SOD1P2-201ENST00000563903 NCAPD3P42695 1498 aa15.94■□□□□ 0.14
SOD1P2-201ENST00000563903 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
SOD1P2-201ENST00000563903 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
SOD1P2-201ENST00000563903 ATAD2BQ9ULI0 1458 aa15.87■□□□□ 0.13
SOD1P2-201ENST00000563903 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
SOD1P2-201ENST00000563903 BAZ1AQ9NRL2 1556 aaPredicted RBP15.84■□□□□ 0.13
SOD1P2-201ENST00000563903 PEG3Q9GZU2 1588 aa15.76■□□□□ 0.11
SOD1P2-201ENST00000563903 BAZ1BQ9UIG0 1483 aaKnown RBP15.74■□□□□ 0.11
SOD1P2-201ENST00000563903 ERCC6Q03468 1493 aa15.71■□□□□ 0.1
SOD1P2-201ENST00000563903 CUX2O14529 1486 aa15.7■□□□□ 0.1
SOD1P2-201ENST00000563903 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
SOD1P2-201ENST00000563903 LAMC3Q9Y6N6 1575 aa15.59■□□□□ 0.09
SOD1P2-201ENST00000563903 NESP48681 1621 aa15.59■□□□□ 0.09
SOD1P2-201ENST00000563903 DNAJC5Q9H3Z4 198 aa15.57■□□□□ 0.08
SOD1P2-201ENST00000563903 PDS5BQ9NTI5 1447 aa15.5■□□□□ 0.07
SOD1P2-201ENST00000563903 WIZO95785 1651 aa15.48■□□□□ 0.07
SOD1P2-201ENST00000563903 THOC2Q8NI27 1593 aaKnown RBP15.46■□□□□ 0.07
SOD1P2-201ENST00000563903 PHF23Q9BUL5 403 aaPredicted RBP15.46■□□□□ 0.07
SOD1P2-201ENST00000563903 CADPSQ9ULU8 1353 aa15.45■□□□□ 0.06
SOD1P2-201ENST00000563903 KIF21AQ7Z4S6 1674 aa15.42■□□□□ 0.06
SOD1P2-201ENST00000563903 RSF1Q96T23 1441 aaPredicted RBP15.38■□□□□ 0.05
SOD1P2-201ENST00000563903 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.05
SOD1P2-201ENST00000563903 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.04
SOD1P2-201ENST00000563903 WDR62O43379 1518 aa15.29■□□□□ 0.04
SOD1P2-201ENST00000563903 CEP164Q9UPV0 1460 aa15.29■□□□□ 0.04
SOD1P2-201ENST00000563903 CFTRP13569 1480 aa15.28■□□□□ 0.04
SOD1P2-201ENST00000563903 FANCD2Q9BXW9 1451 aa15.26■□□□□ 0.03
SOD1P2-201ENST00000563903 PRDM2Q13029 1718 aa15.17■□□□□ 0.02
SOD1P2-201ENST00000563903 SENP3Q9H4L4 574 aaPredicted RBP15.16■□□□□ 0.02
SOD1P2-201ENST00000563903 CCDC88BA6NC98 1476 aa15.13■□□□□ 0.01
SOD1P2-201ENST00000563903 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
SOD1P2-201ENST00000563903 ABCC8Q09428 1581 aa15.02■□□□□ -0
SOD1P2-201ENST00000563903 IFT140Q96RY7 1462 aa14.99□□□□□ -0.01
SOD1P2-201ENST00000563903 TOPBP1Q92547 1522 aa14.97□□□□□ -0.01
SOD1P2-201ENST00000563903 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
SOD1P2-201ENST00000563903 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
SOD1P2-201ENST00000563903 ZNF608Q9ULD9 1512 aaPredicted RBP14.88□□□□□ -0.03
SOD1P2-201ENST00000563903 TRIM41Q8WV44 630 aa14.87□□□□□ -0.03
SOD1P2-201ENST00000563903 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
SOD1P2-201ENST00000563903 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
SOD1P2-201ENST00000563903 POLA1P09884 1462 aaPredicted RBP14.82□□□□□ -0.04
SOD1P2-201ENST00000563903 WDR97A6NE52 1622 aa14.78□□□□□ -0.04
SOD1P2-201ENST00000563903 AQRO60306 1485 aaKnown RBP eCLIP14.77□□□□□ -0.04
SOD1P2-201ENST00000563903 SOGA1O94964 1423 aa14.77□□□□□ -0.04
SOD1P2-201ENST00000563903 RIMBP3CA6NJZ7 1639 aa14.74□□□□□ -0.05
SOD1P2-201ENST00000563903 RIMBP3BA6NNM3 1639 aa14.74□□□□□ -0.05
SOD1P2-201ENST00000563903 RIMBP3Q9UFD9 1639 aa14.74□□□□□ -0.05
SOD1P2-201ENST00000563903 FGD5Q6ZNL6 1462 aa14.73□□□□□ -0.05
SOD1P2-201ENST00000563903 RAD54L2Q9Y4B4 1467 aa14.73□□□□□ -0.05
SOD1P2-201ENST00000563903 CHD1O14646 1710 aa14.72□□□□□ -0.05
SOD1P2-201ENST00000563903 CUX1P39880 1505 aa14.71□□□□□ -0.05
SOD1P2-201ENST00000563903 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
SOD1P2-201ENST00000563903 ARHGEF11O15085 1522 aa14.7□□□□□ -0.06
SOD1P2-201ENST00000563903 TDRD9Q8NDG6 1382 aaKnown RBP14.69□□□□□ -0.06
SOD1P2-201ENST00000563903 FBLN2P98095 1184 aa14.67□□□□□ -0.06
SOD1P2-201ENST00000563903 MAGI1Q96QZ7 1491 aaPredicted RBP14.66□□□□□ -0.06
SOD1P2-201ENST00000563903 GRIN2BQ13224 1484 aa14.65□□□□□ -0.06
SOD1P2-201ENST00000563903 SNAPC4Q5SXM2 1469 aa14.64□□□□□ -0.07
SOD1P2-201ENST00000563903 CHMP7Q8WUX9 453 aaPredicted RBP14.61□□□□□ -0.07
SOD1P2-201ENST00000563903 ABCA10Q8WWZ4 1543 aa14.6□□□□□ -0.07
SOD1P2-201ENST00000563903 SYNJ1O43426 1573 aa14.6□□□□□ -0.07
SOD1P2-201ENST00000563903 SYNJ2O15056 1496 aa14.59□□□□□ -0.07
SOD1P2-201ENST00000563903 GAPVD1Q14C86 1478 aa14.59□□□□□ -0.07
SOD1P2-201ENST00000563903 PBRM1Q86U86 1689 aa14.58□□□□□ -0.08
SOD1P2-201ENST00000563903 CYB5RLQ6IPT4 315 aa14.57□□□□□ -0.08
SOD1P2-201ENST00000563903 WRNQ14191 1432 aaPredicted RBP eCLIP14.57□□□□□ -0.08
SOD1P2-201ENST00000563903 CLASP1Q7Z460 1538 aa14.56□□□□□ -0.08
SOD1P2-201ENST00000563903 ABCA5Q8WWZ7 1642 aa14.55□□□□□ -0.08
SOD1P2-201ENST00000563903 ARAP1Q96P48 1450 aa14.55□□□□□ -0.08
SOD1P2-201ENST00000563903 TOP2BQ02880 1626 aa14.54□□□□□ -0.08
SOD1P2-201ENST00000563903 BIVM-ERCC5R4GMW8 1640 aa14.54□□□□□ -0.08
SOD1P2-201ENST00000563903 GRIN2AQ12879 1464 aa14.44□□□□□ -0.1
SOD1P2-201ENST00000563903 ADAMTS12P58397 1594 aa14.44□□□□□ -0.1
SOD1P2-201ENST00000563903 ERICH3Q5RHP9 1530 aa14.44□□□□□ -0.1
SOD1P2-201ENST00000563903 FHAD1B1AJZ9 1412 aa14.42□□□□□ -0.1
SOD1P2-201ENST00000563903 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
SOD1P2-201ENST00000563903 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
SOD1P2-201ENST00000563903 NUP160Q12769 1436 aa14.4□□□□□ -0.1
SOD1P2-201ENST00000563903 CEP170Q5SW79 1584 aa14.36□□□□□ -0.11
SOD1P2-201ENST00000563903 SHROOM2Q13796 1616 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms